RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 HTR4Q13639 388 aa11.01□□□□□ -0.65
USP39-212ENST00000465514 UBXN2BQ14CS0 331 aa11.01□□□□□ -0.65
USP39-212ENST00000465514 N4BP2L1Q5TBK1 243 aaPredicted RBP11.01□□□□□ -0.65
USP39-212ENST00000465514 JAKMIP3Q5VZ66 844 aa11.01□□□□□ -0.65
USP39-212ENST00000465514 FAM160B1Q5W0V3 765 aa11.01□□□□□ -0.65
USP39-212ENST00000465514 DDX53Q86TM3 631 aaKnown RBP11.01□□□□□ -0.65
USP39-212ENST00000465514 PLA2G4DQ86XP0 818 aa11.01□□□□□ -0.65
USP39-212ENST00000465514 ECHDC2Q86YB7 292 aa11.01□□□□□ -0.65
USP39-212ENST00000465514 CCDC60Q8IWA6 550 aaPredicted RBP11.01□□□□□ -0.65
USP39-212ENST00000465514 KIAA0319LQ8IZA0 1049 aa11.01□□□□□ -0.65
USP39-212ENST00000465514 SHDQ96IW2 340 aa11.01□□□□□ -0.65
USP39-212ENST00000465514 VN1R3Q9BXE9 311 aa11.01□□□□□ -0.65
USP39-212ENST00000465514 ZNF302Q9NR11 478 aa11.01□□□□□ -0.65
USP39-212ENST00000465514 MAN1C1Q9NR34 630 aa11.01□□□□□ -0.65
USP39-212ENST00000465514 ZMIZ1Q9ULJ6 1067 aa11.01□□□□□ -0.65
USP39-212ENST00000465514 NAP1L2Q9ULW6 460 aaPredicted RBP11.01□□□□□ -0.65
USP39-212ENST00000465514 NUMBLQ9Y6R0 609 aa11.01□□□□□ -0.65
USP39-212ENST00000465514 LAMA1P25391 3075 aa11.01□□□□□ -0.65
USP39-212ENST00000465514 DMXL2Q8TDJ6 3036 aa11.01□□□□□ -0.65
USP39-212ENST00000465514 MAST4O15021 2626 aa11□□□□□ -0.65
USP39-212ENST00000465514 IGLV3-22A0A075B6J6 115 aa11□□□□□ -0.65
USP39-212ENST00000465514 CCDC195A0A1B0GUA6 201 aa11□□□□□ -0.65
USP39-212ENST00000465514 ZBTB42B2RXF5 422 aa11□□□□□ -0.65
USP39-212ENST00000465514 ANHXE9PGG2 379 aa11□□□□□ -0.65
USP39-212ENST00000465514 ADAMTS3O15072 1205 aa11□□□□□ -0.65
USP39-212ENST00000465514 GDF9O60383 454 aa11□□□□□ -0.65
USP39-212ENST00000465514 ADD1P35611 737 aaKnown RBP11□□□□□ -0.65
USP39-212ENST00000465514 CRYBB1P53674 252 aaPredicted RBP11□□□□□ -0.65
USP39-212ENST00000465514 SNW1Q13573 536 aaKnown RBP11□□□□□ -0.65
USP39-212ENST00000465514 KRT32Q14532 448 aa11□□□□□ -0.65
USP39-212ENST00000465514 PFKFB3Q16875 520 aaPredicted RBP11□□□□□ -0.65
USP39-212ENST00000465514 ZNF484Q5JVG2 852 aa11□□□□□ -0.65
USP39-212ENST00000465514 SWSAP1Q6NVH7 229 aa11□□□□□ -0.65
USP39-212ENST00000465514 MIS18BP1Q6P0N0 1132 aa11□□□□□ -0.65
USP39-212ENST00000465514 PDXDC2PQ6P474 469 aa11□□□□□ -0.65
USP39-212ENST00000465514 CMASQ8NFW8 434 aaPredicted RBP11□□□□□ -0.65
USP39-212ENST00000465514 BBXQ8WY36 941 aaPredicted RBP11□□□□□ -0.65
USP39-212ENST00000465514 IGSF21Q96ID5 467 aa11□□□□□ -0.65
USP39-212ENST00000465514 KLHL5Q96PQ7 755 aa11□□□□□ -0.65
USP39-212ENST00000465514 DDX23Q9BUQ8 820 aaKnown RBP11□□□□□ -0.65
USP39-212ENST00000465514 MRPL9Q9BYD2 267 aaKnown RBP11□□□□□ -0.65
USP39-212ENST00000465514 RAB23Q9ULC3 237 aa11□□□□□ -0.65
USP39-212ENST00000465514 COL1A2P08123 1366 aa11□□□□□ -0.65
USP39-212ENST00000465514 FAM170BA6NMN3 283 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 C1QTNF9BB2RNN3 333 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 IPO5O00410 1097 aaKnown RBP10.99□□□□□ -0.65
USP39-212ENST00000465514 INPPL1O15357 1258 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 SSBP05455 408 aaKnown RBP eCLIP10.99□□□□□ -0.65
USP39-212ENST00000465514 CYP3A4P08684 503 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 HMGB1P09429 215 aaKnown RBP10.99□□□□□ -0.65
USP39-212ENST00000465514 CNPP09543 421 aaKnown RBP10.99□□□□□ -0.65
USP39-212ENST00000465514 C1QTNF9P0C862 333 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 LAMP2P13473 410 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 CPA1P15085 419 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 ATP4AP20648 1035 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 RCAN1P53805 252 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 GPC5P78333 572 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 FGD1P98174 961 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 MLF2Q15773 248 aaPredicted RBP10.99□□□□□ -0.65
USP39-212ENST00000465514 LAIR1Q6GTX8 287 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 PRR23CQ6ZRP0 262 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 GET4Q7L5D6 327 aaPredicted RBP10.99□□□□□ -0.65
USP39-212ENST00000465514 CKAP2LQ8IYA6 745 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 CRYGNQ8WXF5 182 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 DDX1Q92499 740 aaKnown RBP10.99□□□□□ -0.65
USP39-212ENST00000465514 ZNF577Q9BSK1 485 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 EMILIN2Q9BXX0 1053 aa10.99□□□□□ -0.65
USP39-212ENST00000465514 PRMT8Q9NR22 394 aaPredicted RBP10.99□□□□□ -0.65
USP39-212ENST00000465514 CCDC196A0A1B0GTZ2 297 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 ESYT2A0FGR8 921 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 LRP3O75074 770 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 GPR32O75388 356 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 CDC45O75419 566 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 RFPL2O75678 378 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 C22orf31O95567 290 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 VTNP04004 478 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 MYBP10242 640 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 ZSCAN20P17040 1043 aaPredicted RBP10.98□□□□□ -0.65
USP39-212ENST00000465514 CD72P21854 359 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 MAGEA9P43362 315 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 ZNF746Q6NUN9 644 aaPredicted RBP10.98□□□□□ -0.65
USP39-212ENST00000465514 UNQ6494/PRO21346Q6UXR6 183 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 Q6ZUG5 572 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 CENPQQ7L2Z9 268 aaPredicted RBP10.98□□□□□ -0.65
USP39-212ENST00000465514 TRMT1LQ7Z2T5 733 aaKnown RBP10.98□□□□□ -0.65
USP39-212ENST00000465514 ZNF598Q86UK7 904 aaKnown RBP10.98□□□□□ -0.65
USP39-212ENST00000465514 REXO1Q8N1G1 1221 aaKnown RBP10.98□□□□□ -0.65
USP39-212ENST00000465514 METTL13Q8N6R0 699 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 SMG7Q92540 1137 aaKnown RBP10.98□□□□□ -0.65
USP39-212ENST00000465514 RPP25Q9BUL9 199 aaKnown RBP10.98□□□□□ -0.65
USP39-212ENST00000465514 ZMYND12Q9H0C1 365 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 C6orf50Q9HD87 102 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 LTB4R2Q9NPC1 389 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 SEMA4GQ9NTN9 838 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 TBC1D22BQ9NU19 505 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 MAFBQ9Y5Q3 323 aaPredicted RBP10.98□□□□□ -0.65
USP39-212ENST00000465514 SPAG17Q6Q759 2223 aa10.98□□□□□ -0.65
USP39-212ENST00000465514 PRPF3O43395 683 aaKnown RBP10.97□□□□□ -0.65
USP39-212ENST00000465514 PSAPP07602 524 aa10.97□□□□□ -0.65
USP39-212ENST00000465514 RETP07949 1114 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms