RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 NOTUMQ6P988 496 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 TAS1R3Q7RTX0 852 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 IQUBQ8NA54 791 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 DNAJC19Q96DA6 116 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 TNMDQ9H2S6 317 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 ZNF576Q9H609 170 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 TMEM134Q9H6X4 195 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 SLC28A3Q9HAS3 691 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 GDPD2Q9HCC8 539 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 FAM105AQ9NUU6 356 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 RNF19AQ9NV58 838 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 KBTBD4Q9NVX7 518 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 CHMP5Q9NZZ3 219 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 LARSQ9P2J5 1176 aaKnown RBP22.42■■□□□ 1.18
SKA3-205ENST00000465471 KCNG1Q9UIX4 513 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 PCDHB7Q9Y5E2 793 aa22.42■■□□□ 1.18
SKA3-205ENST00000465471 A0A1B0GUA9 196 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 LINC01553A4QN01 128 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 TTLL13PA6NNM8 815 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 CCDC169A6NNP5 214 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 ACKR2O00590 384 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 EOMESO95936 686 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 PRKCBP05771 671 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 NCKAP1LP55160 1127 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 PPP2R2DQ66LE6 453 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 Q7L0L9 218 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 TMEM161BQ8NDZ6 487 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 DDX12PQ92771 950 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 DHX58Q96C10 678 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 CPB2Q96IY4 423 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 FIZ1Q96SL8 496 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 SEMA6BQ9H3T3 888 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 MAGEF1Q9HAY2 307 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 PARVGQ9HBI0 331 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 KMT5AQ9NQR1 393 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 KCNH3Q9ULD8 1083 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 LRFN2Q9ULH4 789 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 RALGAPA2Q2PPJ7 1873 aa22.41■■□□□ 1.18
SKA3-205ENST00000465471 FRMD3A2A2Y4 597 aa22.4■■□□□ 1.18
SKA3-205ENST00000465471 POLR2DO15514 142 aaKnown RBP22.4■■□□□ 1.18
SKA3-205ENST00000465471 KRT18P05783 430 aaKnown RBP22.4■■□□□ 1.18
SKA3-205ENST00000465471 LINC00271P0C7V0 271 aa22.4■■□□□ 1.18
SKA3-205ENST00000465471 SKIP12755 728 aa22.4■■□□□ 1.18
SKA3-205ENST00000465471 PFKFB1P16118 471 aa22.4■■□□□ 1.18
SKA3-205ENST00000465471 MRPL10Q7Z7H8 261 aaKnown RBP22.4■■□□□ 1.18
SKA3-205ENST00000465471 CMTR2Q8IYT2 770 aaKnown RBP22.4■■□□□ 1.18
SKA3-205ENST00000465471 PYM1Q9BRP8 204 aaKnown RBP22.4■■□□□ 1.18
SKA3-205ENST00000465471 NLRC5Q86WI3 1866 aa22.4■■□□□ 1.18
SKA3-205ENST00000465471 KIAA1671Q9BY89 1806 aa22.4■■□□□ 1.18
SKA3-205ENST00000465471 SLC16A4O15374 487 aa22.39■■□□□ 1.17
SKA3-205ENST00000465471 TBCAO75347 108 aaKnown RBP22.39■■□□□ 1.17
SKA3-205ENST00000465471 FAM13AO94988 1023 aa22.39■■□□□ 1.17
SKA3-205ENST00000465471 GATMP50440 423 aa22.39■■□□□ 1.17
SKA3-205ENST00000465471 NCBP1Q09161 790 aaKnown RBP22.39■■□□□ 1.17
SKA3-205ENST00000465471 PRPF4BQ13523 1007 aaKnown RBP22.39■■□□□ 1.17
SKA3-205ENST00000465471 CNNM4Q6P4Q7 775 aa22.39■■□□□ 1.17
SKA3-205ENST00000465471 SPRED2Q7Z698 418 aa22.39■■□□□ 1.17
SKA3-205ENST00000465471 DEFB123Q8N688 67 aa22.39■■□□□ 1.17
SKA3-205ENST00000465471 EIF2AQ9BY44 585 aaKnown RBP22.39■■□□□ 1.17
SKA3-205ENST00000465471 PCDHB2Q9Y5E7 798 aa22.39■■□□□ 1.17
SKA3-205ENST00000465471 A0A1B0GVL5 298 aa22.38■■□□□ 1.17
SKA3-205ENST00000465471 K7ERI5 159 aa22.38■■□□□ 1.17
SKA3-205ENST00000465471 HOXA2O43364 376 aa22.38■■□□□ 1.17
SKA3-205ENST00000465471 MAPTP10636 758 aaKnown RBP22.38■■□□□ 1.17
SKA3-205ENST00000465471 FGFR1P11362 822 aa22.38■■□□□ 1.17
SKA3-205ENST00000465471 SCP2P22307 547 aa22.38■■□□□ 1.17
SKA3-205ENST00000465471 SMTNP53814 917 aa22.38■■□□□ 1.17
SKA3-205ENST00000465471 CLLU1OSQ5K130 101 aa22.38■■□□□ 1.17
SKA3-205ENST00000465471 NT5DC1Q5TFE4 455 aa22.38■■□□□ 1.17
SKA3-205ENST00000465471 SLC27A1Q6PCB7 646 aa22.38■■□□□ 1.17
SKA3-205ENST00000465471 DYMQ7RTS9 669 aa22.38■■□□□ 1.17
SKA3-205ENST00000465471 SMG8Q8ND04 991 aaKnown RBP22.38■■□□□ 1.17
SKA3-205ENST00000465471 PDZD7Q9H5P4 517 aa22.38■■□□□ 1.17
SKA3-205ENST00000465471 MTMR10Q9NXD2 777 aa22.38■■□□□ 1.17
SKA3-205ENST00000465471 TRANK1O15050 2925 aa22.37■■□□□ 1.17
SKA3-205ENST00000465471 H0YCG3 227 aa22.37■■□□□ 1.17
SKA3-205ENST00000465471 ACTN4O43707 911 aaKnown RBP22.37■■□□□ 1.17
SKA3-205ENST00000465471 ERVK-21P61565 698 aa22.37■■□□□ 1.17
SKA3-205ENST00000465471 MYCT1Q8N699 235 aa22.37■■□□□ 1.17
SKA3-205ENST00000465471 CLP1Q92989 425 aaKnown RBP22.37■■□□□ 1.17
SKA3-205ENST00000465471 TRIM9Q9C026 710 aa22.37■■□□□ 1.17
SKA3-205ENST00000465471 LRRC27Q9C0I9 530 aa22.37■■□□□ 1.17
SKA3-205ENST00000465471 TMEM117Q9H0C3 514 aa22.37■■□□□ 1.17
SKA3-205ENST00000465471 ST6GALNAC4Q9H4F1 302 aa22.37■■□□□ 1.17
SKA3-205ENST00000465471 COL4A4P53420 1690 aaPredicted RBP22.36■■□□□ 1.17
SKA3-205ENST00000465471 MEIS3P2A8K0S8 358 aa22.36■■□□□ 1.17
SKA3-205ENST00000465471 N4BP3O15049 544 aa22.36■■□□□ 1.17
SKA3-205ENST00000465471 TRAK2O60296 914 aa22.36■■□□□ 1.17
SKA3-205ENST00000465471 SLFN14P0C7P3 912 aa22.36■■□□□ 1.17
SKA3-205ENST00000465471 IBSPP21815 317 aaPredicted RBP22.36■■□□□ 1.17
SKA3-205ENST00000465471 BTG3Q14201 252 aaPredicted RBP22.36■■□□□ 1.17
SKA3-205ENST00000465471 GRIN2CQ14957 1233 aa22.36■■□□□ 1.17
SKA3-205ENST00000465471 HAUS6Q7Z4H7 955 aa22.36■■□□□ 1.17
SKA3-205ENST00000465471 CDR2LQ86X02 465 aaPredicted RBP22.36■■□□□ 1.17
SKA3-205ENST00000465471 FIBCD1Q8N539 461 aa22.36■■□□□ 1.17
SKA3-205ENST00000465471 CNNM3Q8NE01 707 aa22.36■■□□□ 1.17
SKA3-205ENST00000465471 RSPH1Q8WYR4 309 aa22.36■■□□□ 1.17
SKA3-205ENST00000465471 MRPS27Q92552 414 aaKnown RBP22.36■■□□□ 1.17
SKA3-205ENST00000465471 STAMQ92783 540 aa22.36■■□□□ 1.17
SKA3-205ENST00000465471 GUCD1Q96NT3 240 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms