RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PPP1R2P41236 205 aa15.33■□□□□ 0.04
HDAC6-215ENST00000465457 MRPS9P82933 396 aaKnown RBP15.33■□□□□ 0.04
HDAC6-215ENST00000465457 Q4G0T1 1027 aa15.33■□□□□ 0.04
HDAC6-215ENST00000465457 KRT79Q5XKE5 535 aa15.33■□□□□ 0.04
HDAC6-215ENST00000465457 CYFIP1Q7L576 1253 aa15.33■□□□□ 0.04
HDAC6-215ENST00000465457 ZBTB33Q86T24 672 aa15.33■□□□□ 0.04
HDAC6-215ENST00000465457 ADSSL1Q8N142 457 aa15.33■□□□□ 0.04
HDAC6-215ENST00000465457 KREMEN2Q8NCW0 462 aa15.33■□□□□ 0.04
HDAC6-215ENST00000465457 CRYGNQ8WXF5 182 aa15.33■□□□□ 0.04
HDAC6-215ENST00000465457 MAF1Q9H063 256 aa15.33■□□□□ 0.04
HDAC6-215ENST00000465457 IRF2BPLQ9H1B7 796 aa15.33■□□□□ 0.04
HDAC6-215ENST00000465457 TLE6Q9H808 572 aa15.33■□□□□ 0.04
HDAC6-215ENST00000465457 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-215ENST00000465457 ESPNB1AK53 854 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 SLC37A4O43826 429 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 TECP42680 631 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 TXKP42681 527 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 AFMP43652 599 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 ERVFC1P60507 584 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 KCNB1Q14721 858 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 KARSQ15046 597 aaKnown RBP15.32■□□□□ 0.04
HDAC6-215ENST00000465457 DUSP6Q16828 381 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 KCNV1Q6PIU1 500 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 USP17L6PQ6QN14 398 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 FCHSD1Q86WN1 690 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 KCTD17Q8N5Z5 321 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 ENOX1Q8TC92 643 aaKnown RBP15.32■□□□□ 0.04
HDAC6-215ENST00000465457 DNAJB3Q8WWF6 145 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 CDK5RAP3Q96JB5 506 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 FAM20AQ96MK3 541 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 NT5C3AQ9H0P0 336 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 S1PR5Q9H228 398 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 KBTBD4Q9NVX7 518 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 CDY2AQ9Y6F7 541 aa15.32■□□□□ 0.04
HDAC6-215ENST00000465457 DENND4AQ7Z401 1863 aa15.31■□□□□ 0.04
HDAC6-215ENST00000465457 SPTBN2O15020 2390 aa15.31■□□□□ 0.04
HDAC6-215ENST00000465457 CBFA2T2O43439 604 aa15.31■□□□□ 0.04
HDAC6-215ENST00000465457 MSNP26038 577 aaKnown RBP15.31■□□□□ 0.04
HDAC6-215ENST00000465457 CCND2P30279 289 aa15.31■□□□□ 0.04
HDAC6-215ENST00000465457 SYCE2Q6PIF2 218 aa15.31■□□□□ 0.04
HDAC6-215ENST00000465457 METTL7BQ6UX53 244 aa15.31■□□□□ 0.04
HDAC6-215ENST00000465457 TSHZ1Q6ZSZ6 1077 aa15.31■□□□□ 0.04
HDAC6-215ENST00000465457 ERMNQ8TAM6 284 aa15.31■□□□□ 0.04
HDAC6-215ENST00000465457 NKD2Q969F2 451 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-215ENST00000465457 TTC12Q9H892 705 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-215ENST00000465457 KCNMB3Q9NPA1 279 aa15.31■□□□□ 0.04
HDAC6-215ENST00000465457 PCDHA12Q9UN75 941 aa15.31■□□□□ 0.04
HDAC6-215ENST00000465457 KRT37O76014 449 aa15.3■□□□□ 0.04
HDAC6-215ENST00000465457 RPN1P04843 607 aaKnown RBP15.3■□□□□ 0.04
HDAC6-215ENST00000465457 TGFB3P10600 412 aa15.3■□□□□ 0.04
HDAC6-215ENST00000465457 GNAT1P11488 350 aa15.3■□□□□ 0.04
HDAC6-215ENST00000465457 PLCG1P19174 1290 aa15.3■□□□□ 0.04
HDAC6-215ENST00000465457 MARK3P27448 753 aa15.3■□□□□ 0.04
HDAC6-215ENST00000465457 TMEM62Q0P6H9 643 aa15.3■□□□□ 0.04
HDAC6-215ENST00000465457 KCNC3Q14003 757 aa15.3■□□□□ 0.04
HDAC6-215ENST00000465457 NCAPHQ15003 741 aa15.3■□□□□ 0.04
HDAC6-215ENST00000465457 NAALADL2Q58DX5 795 aa15.3■□□□□ 0.04
HDAC6-215ENST00000465457 MARCH8Q5T0T0 291 aa15.3■□□□□ 0.04
HDAC6-215ENST00000465457 HAUS3Q68CZ6 603 aa15.3■□□□□ 0.04
HDAC6-215ENST00000465457 LLGL2Q6P1M3 1020 aa15.3■□□□□ 0.04
HDAC6-215ENST00000465457 GRAMD1CQ8IYS0 662 aa15.3■□□□□ 0.04
HDAC6-215ENST00000465457 ZKSCAN5Q9Y2L8 839 aa15.3■□□□□ 0.04
HDAC6-215ENST00000465457 NRCAMQ92823 1304 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 C2CD4DB7Z1M9 353 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 AP5Z1O43299 807 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 ASGR2P07307 311 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 SETQ01105 290 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-215ENST00000465457 PPFIA1Q13136 1202 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 STIM1Q13586 685 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 HYIQ5T013 277 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 ZNF658Q5TYW1 1059 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-215ENST00000465457 ANKRD54Q6NXT1 300 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 CNNM4Q6P4Q7 775 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 NPAS4Q8IUM7 802 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 FEZF2Q8TBJ5 459 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 MICAL1Q8TDZ2 1067 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 SNX29Q8TEQ0 813 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 HAS1Q92839 578 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 RMDN1Q96DB5 314 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 INPP4AQ96PE3 977 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-215ENST00000465457 C7orf25Q9BPX7 421 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 FAM49AQ9H0Q0 323 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-215ENST00000465457 TMX1Q9H3N1 280 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 ZNF215Q9UL58 517 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-215ENST00000465457 ZFHX4Q86UP3 3567 aa15.29■□□□□ 0.04
HDAC6-215ENST00000465457 OTOGLQ3ZCN5 2332 aa15.28■□□□□ 0.04
HDAC6-215ENST00000465457 FRMPD4Q14CM0 1322 aa15.28■□□□□ 0.04
HDAC6-215ENST00000465457 PP2D1A8MPX8 630 aa15.28■□□□□ 0.04
HDAC6-215ENST00000465457 SPATA31C2B4DYI2 1134 aa15.28■□□□□ 0.04
HDAC6-215ENST00000465457 FSCN2O14926 492 aa15.28■□□□□ 0.04
HDAC6-215ENST00000465457 EDIL3O43854 480 aa15.28■□□□□ 0.04
HDAC6-215ENST00000465457 BMP6P22004 513 aa15.28■□□□□ 0.04
HDAC6-215ENST00000465457 NUBP1P53384 320 aa15.28■□□□□ 0.04
HDAC6-215ENST00000465457 MTMR3Q13615 1198 aa15.28■□□□□ 0.04
HDAC6-215ENST00000465457 GRIK4Q16099 956 aa15.28■□□□□ 0.04
HDAC6-215ENST00000465457 TMEM119Q4V9L6 283 aa15.28■□□□□ 0.04
HDAC6-215ENST00000465457 PLPP4Q5VZY2 271 aa15.28■□□□□ 0.04
HDAC6-215ENST00000465457 CWF19L1Q69YN2 538 aaKnown RBP15.28■□□□□ 0.04
HDAC6-215ENST00000465457 TAF2Q6P1X5 1199 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms