RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 C1orf112Q9NSG2 853 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 HOOK1Q9UJC3 728 aaKnown RBP19.33■□□□□ 0.68
CPSF4-209ENST00000465132 ST3GAL5Q9UNP4 418 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 DENND3A2RUS2 1198 aa19.32■□□□□ 0.68
CPSF4-209ENST00000465132 C22orf31O95567 290 aa19.32■□□□□ 0.68
CPSF4-209ENST00000465132 POLGP54098 1239 aaPredicted RBP19.32■□□□□ 0.68
CPSF4-209ENST00000465132 KARSQ15046 597 aaKnown RBP19.32■□□□□ 0.68
CPSF4-209ENST00000465132 TMEM119Q4V9L6 283 aa19.32■□□□□ 0.68
CPSF4-209ENST00000465132 SPECC1Q5M775 1068 aa19.32■□□□□ 0.68
CPSF4-209ENST00000465132 ODR4Q5SWX8 454 aa19.32■□□□□ 0.68
CPSF4-209ENST00000465132 SLC24A5Q71RS6 500 aa19.32■□□□□ 0.68
CPSF4-209ENST00000465132 ANO5Q75V66 913 aa19.32■□□□□ 0.68
CPSF4-209ENST00000465132 MCPH1Q8NEM0 835 aa19.32■□□□□ 0.68
CPSF4-209ENST00000465132 RNF216Q9NWF9 866 aaPredicted RBP19.32■□□□□ 0.68
CPSF4-209ENST00000465132 CLEC1BQ9P126 229 aa19.32■□□□□ 0.68
CPSF4-209ENST00000465132 KIAA1671Q9BY89 1806 aa19.32■□□□□ 0.68
CPSF4-209ENST00000465132 C9IYK1 514 aa19.31■□□□□ 0.68
CPSF4-209ENST00000465132 GPR182O15218 404 aa19.31■□□□□ 0.68
CPSF4-209ENST00000465132 PLCG1P19174 1290 aa19.31■□□□□ 0.68
CPSF4-209ENST00000465132 SYKP43405 635 aa19.31■□□□□ 0.68
CPSF4-209ENST00000465132 NRIP1P48552 1158 aa19.31■□□□□ 0.68
CPSF4-209ENST00000465132 CRYBB1P53674 252 aaPredicted RBP19.31■□□□□ 0.68
CPSF4-209ENST00000465132 MTERF2Q49AM1 385 aa19.31■□□□□ 0.68
CPSF4-209ENST00000465132 SV2BQ7L1I2 683 aa19.31■□□□□ 0.68
CPSF4-209ENST00000465132 TRMT1LQ7Z2T5 733 aaKnown RBP19.31■□□□□ 0.68
CPSF4-209ENST00000465132 FSIP1Q8NA03 581 aa19.31■□□□□ 0.68
CPSF4-209ENST00000465132 TCP11Q8WWU5 503 aa19.31■□□□□ 0.68
CPSF4-209ENST00000465132 LARP4BQ92615 738 aaKnown RBP19.31■□□□□ 0.68
CPSF4-209ENST00000465132 PCDHB12Q9Y5F1 795 aa19.31■□□□□ 0.68
CPSF4-209ENST00000465132 FAM237AA0A1B0GTK4 181 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 TBKBP1A7MCY6 615 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 PRPF40AO75400 957 aaKnown RBP19.3■□□□□ 0.68
CPSF4-209ENST00000465132 RARRES1P49788 294 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 COASYQ13057 564 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 KIZQ2M2Z5 673 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 HERC4Q5GLZ8 1057 aaPredicted RBP19.3■□□□□ 0.68
CPSF4-209ENST00000465132 FAM102BQ5T8I3 360 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 RBM23Q86U06 439 aaKnown RBP19.3■□□□□ 0.68
CPSF4-209ENST00000465132 PDILTQ8N807 584 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 PIGOQ8TEQ8 1089 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 PNMA5Q96PV4 448 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 MAP7D2Q96T17 732 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 PPP1R16BQ96T49 567 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 OSMRQ99650 979 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 BHMT2Q9H2M3 363 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 ATP6V0A4Q9HBG4 840 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 AAASQ9NRG9 546 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 PCDHGC5Q9Y5F6 944 aa19.3■□□□□ 0.68
CPSF4-209ENST00000465132 POLR2DO15514 142 aaKnown RBP19.29■□□□□ 0.68
CPSF4-209ENST00000465132 GPR32O75388 356 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 GLP2RO95838 553 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 SSBP05455 408 aaKnown RBP eCLIP19.29■□□□□ 0.68
CPSF4-209ENST00000465132 MYL1P05976 194 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 PLA2G4BP0C869 781 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 PFKFB1P16118 471 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 FAM189BP81408 668 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 UBE3AQ05086 875 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 FAM160A1Q05DH4 1040 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 TARBP2Q15633 366 aaKnown RBP19.29■□□□□ 0.68
CPSF4-209ENST00000465132 SPOUT1Q5T280 376 aaKnown RBP19.29■□□□□ 0.68
CPSF4-209ENST00000465132 FAM228AQ86W67 206 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 RNF135Q8IUD6 432 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 METTL13Q8N6R0 699 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 SYT2Q8N9I0 419 aaPredicted RBP19.29■□□□□ 0.68
CPSF4-209ENST00000465132 SMRP1Q8NCR6 262 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 RAD54LQ92698 747 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 CHAMP1Q96JM3 812 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 TNMDQ9H2S6 317 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 WRAP73Q9P2S5 460 aaPredicted RBP19.29■□□□□ 0.68
CPSF4-209ENST00000465132 MUTYHQ9UIF7 546 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 ARID2Q68CP9 1835 aa19.29■□□□□ 0.68
CPSF4-209ENST00000465132 MUC6Q6W4X9 2439 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 A0A1B0GVL5 298 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 E9PMD0 336 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 ASAP2O43150 1006 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 MAFO75444 373 aaPredicted RBP19.28■□□□□ 0.68
CPSF4-209ENST00000465132 STBD1O95210 358 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 VTNP04004 478 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 KRT18P05783 430 aaKnown RBP19.28■□□□□ 0.68
CPSF4-209ENST00000465132 DSC3Q14574 896 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 PADI6Q6TGC4 694 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 USP49Q70CQ1 688 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 MICAL1Q8TDZ2 1067 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 PLIN2Q99541 437 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 MTRQ99707 1265 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 TLE6Q9H808 572 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 TYW1Q9NV66 732 aaKnown RBP19.28■□□□□ 0.68
CPSF4-209ENST00000465132 TMEM161AQ9NX61 479 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 HCSTQ9UBK5 93 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 BARX2Q9UMQ3 279 aaPredicted RBP19.28■□□□□ 0.68
CPSF4-209ENST00000465132 HPSEQ9Y251 543 aa19.28■□□□□ 0.68
CPSF4-209ENST00000465132 KINO60870 393 aaKnown RBP19.27■□□□□ 0.68
CPSF4-209ENST00000465132 FGF18O76093 207 aa19.27■□□□□ 0.68
CPSF4-209ENST00000465132 SLFN14P0C7P3 912 aa19.27■□□□□ 0.68
CPSF4-209ENST00000465132 FGFR1P11362 822 aa19.27■□□□□ 0.68
CPSF4-209ENST00000465132 MXD4Q14582 209 aaPredicted RBP19.27■□□□□ 0.68
CPSF4-209ENST00000465132 PLA2G4FQ68DD2 849 aa19.27■□□□□ 0.68
CPSF4-209ENST00000465132 HFE2Q6ZVN8 426 aa19.27■□□□□ 0.68
CPSF4-209ENST00000465132 THNSL1Q8IYQ7 743 aa19.27■□□□□ 0.68
CPSF4-209ENST00000465132 COLGALT1Q8NBJ5 622 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms