RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 RSAD1Q9HA92 442 aa17.21■□□□□ 0.35
HOXB3-204ENST00000465120 DNAJB4Q9UDY4 337 aa17.21■□□□□ 0.35
HOXB3-204ENST00000465120 CLASP2O75122 1294 aaKnown RBP17.2■□□□□ 0.34
HOXB3-204ENST00000465120 SEC24BO95487 1268 aa17.2■□□□□ 0.34
HOXB3-204ENST00000465120 ITGA4P13612 1032 aa17.2■□□□□ 0.34
HOXB3-204ENST00000465120 MCM7P33993 719 aa17.2■□□□□ 0.34
HOXB3-204ENST00000465120 KCNC3Q14003 757 aa17.2■□□□□ 0.34
HOXB3-204ENST00000465120 SYCE2Q6PIF2 218 aa17.2■□□□□ 0.34
HOXB3-204ENST00000465120 AGMOQ6ZNB7 445 aa17.2■□□□□ 0.34
HOXB3-204ENST00000465120 DDX53Q86TM3 631 aaKnown RBP17.2■□□□□ 0.34
HOXB3-204ENST00000465120 TMEM173Q86WV6 379 aaPredicted RBP17.2■□□□□ 0.34
HOXB3-204ENST00000465120 ZNF280BQ86YH2 543 aa17.2■□□□□ 0.34
HOXB3-204ENST00000465120 PIGOQ8TEQ8 1089 aa17.2■□□□□ 0.34
HOXB3-204ENST00000465120 SUSD6Q92537 303 aa17.2■□□□□ 0.34
HOXB3-204ENST00000465120 EDAQ92838 391 aa17.2■□□□□ 0.34
HOXB3-204ENST00000465120 S1PR5Q9H228 398 aa17.2■□□□□ 0.34
HOXB3-204ENST00000465120 TSHZ2Q9NRE2 1034 aa17.2■□□□□ 0.34
HOXB3-204ENST00000465120 ANKEF1Q9NU02 776 aa17.2■□□□□ 0.34
HOXB3-204ENST00000465120 KANSL3Q9P2N6 904 aa17.2■□□□□ 0.34
HOXB3-204ENST00000465120 HCFC2Q9Y5Z7 792 aa17.2■□□□□ 0.34
HOXB3-204ENST00000465120 A0A087WWV3 80 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 SPDYE4A6NLX3 237 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 DGAT1O75907 488 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 POMCP01189 267 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 ALDH2P05091 517 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 HOXA11P31270 313 aaPredicted RBP17.19■□□□□ 0.34
HOXB3-204ENST00000465120 SLC11A1P49279 550 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 GNL2Q13823 731 aaKnown RBP17.19■□□□□ 0.34
HOXB3-204ENST00000465120 GIT2Q14161 759 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 HFE2Q6ZVN8 426 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 MRPL10Q7Z7H8 261 aaKnown RBP17.19■□□□□ 0.34
HOXB3-204ENST00000465120 ZBTB33Q86T24 672 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 CCDC83Q8IWF9 413 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 CNNM3Q8NE01 707 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 CPB2Q96IY4 423 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 MFSD14AQ96MC6 490 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 HSD17B14Q9BPX1 270 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 TRIM6Q9C030 488 aaPredicted RBP17.19■□□□□ 0.34
HOXB3-204ENST00000465120 ZBP1Q9H171 429 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 XPNPEP1Q9NQW7 623 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 LIMCH1Q9UPQ0 1083 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 FAN1Q9Y2M0 1017 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 CNTNAP2Q9UHC6 1331 aa17.19■□□□□ 0.34
HOXB3-204ENST00000465120 WNT7AO00755 349 aa17.18■□□□□ 0.34
HOXB3-204ENST00000465120 DDHD2O94830 711 aa17.18■□□□□ 0.34
HOXB3-204ENST00000465120 LYPLA2O95372 231 aa17.18■□□□□ 0.34
HOXB3-204ENST00000465120 SSBP05455 408 aaKnown RBP eCLIP17.18■□□□□ 0.34
HOXB3-204ENST00000465120 AXLP30530 894 aa17.18■□□□□ 0.34
HOXB3-204ENST00000465120 PTENP60484 403 aa17.18■□□□□ 0.34
HOXB3-204ENST00000465120 UBXN11Q5T124 520 aa17.18■□□□□ 0.34
HOXB3-204ENST00000465120 NOTUMQ6P988 496 aa17.18■□□□□ 0.34
HOXB3-204ENST00000465120 MAEAQ7L5Y9 396 aa17.18■□□□□ 0.34
HOXB3-204ENST00000465120 C8orf76Q96K31 380 aa17.18■□□□□ 0.34
HOXB3-204ENST00000465120 APOL6Q9BWW8 343 aa17.18■□□□□ 0.34
HOXB3-204ENST00000465120 UBN1Q9NPG3 1134 aa17.18■□□□□ 0.34
HOXB3-204ENST00000465120 ARID2Q68CP9 1835 aa17.17■□□□□ 0.34
HOXB3-204ENST00000465120 POTEMA6NI47 508 aa17.17■□□□□ 0.34
HOXB3-204ENST00000465120 TSPAN1O60635 241 aa17.17■□□□□ 0.34
HOXB3-204ENST00000465120 USO1O60763 962 aaKnown RBP17.17■□□□□ 0.34
HOXB3-204ENST00000465120 CTSAP10619 480 aa17.17■□□□□ 0.34
HOXB3-204ENST00000465120 NCLP19338 710 aaKnown RBP17.17■□□□□ 0.34
HOXB3-204ENST00000465120 AFF1P51825 1210 aaKnown RBP17.17■□□□□ 0.34
HOXB3-204ENST00000465120 ZXDAP98168 799 aa17.17■□□□□ 0.34
HOXB3-204ENST00000465120 ITIH3Q06033 890 aa17.17■□□□□ 0.34
HOXB3-204ENST00000465120 PCBP1Q15365 356 aaKnown RBP eCLIP17.17■□□□□ 0.34
HOXB3-204ENST00000465120 RARS2Q5T160 578 aaKnown RBP17.17■□□□□ 0.34
HOXB3-204ENST00000465120 TRIM67Q6ZTA4 783 aa17.17■□□□□ 0.34
HOXB3-204ENST00000465120 C12orf76Q8N812 135 aaPredicted RBP17.17■□□□□ 0.34
HOXB3-204ENST00000465120 ASAP3Q8TDY4 903 aa17.17■□□□□ 0.34
HOXB3-204ENST00000465120 BCL7CQ8WUZ0 217 aaPredicted RBP17.17■□□□□ 0.34
HOXB3-204ENST00000465120 PBXIP1Q96AQ6 731 aa17.17■□□□□ 0.34
HOXB3-204ENST00000465120 MTMR9Q96QG7 549 aa17.17■□□□□ 0.34
HOXB3-204ENST00000465120 EIF2AQ9BY44 585 aaKnown RBP17.17■□□□□ 0.34
HOXB3-204ENST00000465120 CDH22Q9UJ99 828 aa17.17■□□□□ 0.34
HOXB3-204ENST00000465120 NR2E1Q9Y466 385 aa17.17■□□□□ 0.34
HOXB3-204ENST00000465120 IPPQ9Y573 584 aa17.17■□□□□ 0.34
HOXB3-204ENST00000465120 TMEM221A6NGB7 291 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 M0R296 226 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 NRP1O14786 923 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 WEE2P0C1S8 567 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 EPCAMP16422 314 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 OR1G1P47890 313 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 RARRES1P49788 294 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 CAPSQ13938 189 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 ZNF174Q15697 407 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 HACE1Q8IYU2 909 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 FAM184AQ8NB25 1140 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 SMG8Q8ND04 991 aaKnown RBP17.16■□□□□ 0.34
HOXB3-204ENST00000465120 RIPOR3Q96MK2 946 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 TMEM175Q9BSA9 504 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 EMILIN2Q9BXX0 1053 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 CSRNP2Q9H175 543 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 POLR3FQ9H1D9 316 aaPredicted RBP17.16■□□□□ 0.34
HOXB3-204ENST00000465120 TMEM60Q9H2L4 133 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 ADAM7Q9H2U9 754 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 DZANK1Q9NVP4 752 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 STK39Q9UEW8 545 aa17.16■□□□□ 0.34
HOXB3-204ENST00000465120 PRG3Q9Y2Y8 225 aaPredicted RBP17.16■□□□□ 0.34
HOXB3-204ENST00000465120 LRRIQ4A6NIV6 560 aa17.15■□□□□ 0.34
HOXB3-204ENST00000465120 C2CD2LO14523 706 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms