RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 IRAK3Q9Y616 596 aa10.79□□□□□ -0.68
APP-213ENST00000464867 IGF2RP11717 2491 aa10.78□□□□□ -0.68
APP-213ENST00000464867 FAM170BA6NMN3 283 aa10.78□□□□□ -0.68
APP-213ENST00000464867 NCAM2O15394 837 aa10.78□□□□□ -0.68
APP-213ENST00000464867 MGEA5O60502 916 aa10.78□□□□□ -0.68
APP-213ENST00000464867 LRRN2O75325 713 aa10.78□□□□□ -0.68
APP-213ENST00000464867 PARP1P09874 1014 aaKnown RBP10.78□□□□□ -0.68
APP-213ENST00000464867 KLRC2P26717 231 aa10.78□□□□□ -0.68
APP-213ENST00000464867 METAP2P50579 478 aaKnown RBP eCLIP10.78□□□□□ -0.68
APP-213ENST00000464867 POLGP54098 1239 aaPredicted RBP10.78□□□□□ -0.68
APP-213ENST00000464867 FAM189BP81408 668 aa10.78□□□□□ -0.68
APP-213ENST00000464867 PPP2R5DQ14738 602 aa10.78□□□□□ -0.68
APP-213ENST00000464867 CSRP2Q16527 193 aa10.78□□□□□ -0.68
APP-213ENST00000464867 CCDC178Q5BJE1 867 aa10.78□□□□□ -0.68
APP-213ENST00000464867 CYP26C1Q6V0L0 522 aa10.78□□□□□ -0.68
APP-213ENST00000464867 PRR23CQ6ZRP0 262 aa10.78□□□□□ -0.68
APP-213ENST00000464867 DGKHQ86XP1 1220 aa10.78□□□□□ -0.68
APP-213ENST00000464867 CELF5Q8N6W0 485 aaKnown RBP10.78□□□□□ -0.68
APP-213ENST00000464867 PNMA1Q8ND90 353 aa10.78□□□□□ -0.68
APP-213ENST00000464867 CASD1Q96PB1 797 aa10.78□□□□□ -0.68
APP-213ENST00000464867 MYL10Q9BUA6 226 aa10.78□□□□□ -0.68
APP-213ENST00000464867 OSBPL6Q9BZF3 934 aa10.78□□□□□ -0.68
APP-213ENST00000464867 AZI2Q9H6S1 392 aa10.78□□□□□ -0.68
APP-213ENST00000464867 JMJD4Q9H9V9 463 aa10.78□□□□□ -0.68
APP-213ENST00000464867 SEMA4GQ9NTN9 838 aa10.78□□□□□ -0.68
APP-213ENST00000464867 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.78□□□□□ -0.68
APP-213ENST00000464867 DPP7Q9UHL4 492 aa10.78□□□□□ -0.68
APP-213ENST00000464867 NOC2LQ9Y3T9 749 aaKnown RBP10.78□□□□□ -0.68
APP-213ENST00000464867 SMIM35A0A1B0GVV1 85 aa10.77□□□□□ -0.69
APP-213ENST00000464867 TMEM8BA6NDV4 472 aa10.77□□□□□ -0.69
APP-213ENST00000464867 OPLAHO14841 1288 aa10.77□□□□□ -0.69
APP-213ENST00000464867 CTSAP10619 480 aa10.77□□□□□ -0.69
APP-213ENST00000464867 PCP11498 1178 aaKnown RBP10.77□□□□□ -0.69
APP-213ENST00000464867 RLBP1P12271 317 aa10.77□□□□□ -0.69
APP-213ENST00000464867 ZSCAN20P17040 1043 aaPredicted RBP10.77□□□□□ -0.69
APP-213ENST00000464867 MRPS9P82933 396 aaKnown RBP10.77□□□□□ -0.69
APP-213ENST00000464867 PRKCQQ04759 706 aa10.77□□□□□ -0.69
APP-213ENST00000464867 LPAL2Q16609 132 aa10.77□□□□□ -0.69
APP-213ENST00000464867 ZBTB41Q5SVQ8 909 aa10.77□□□□□ -0.69
APP-213ENST00000464867 C6orf118Q5T5N4 469 aa10.77□□□□□ -0.69
APP-213ENST00000464867 PRR23BQ6ZRT6 265 aa10.77□□□□□ -0.69
APP-213ENST00000464867 MFSD6Q6ZSS7 791 aa10.77□□□□□ -0.69
APP-213ENST00000464867 KDF1Q8NAX2 398 aaPredicted RBP10.77□□□□□ -0.69
APP-213ENST00000464867 RNF169Q8NCN4 708 aa10.77□□□□□ -0.69
APP-213ENST00000464867 AUTS2Q8WXX7 1259 aa10.77□□□□□ -0.69
APP-213ENST00000464867 ZBTB10Q96DT7 871 aa10.77□□□□□ -0.69
APP-213ENST00000464867 ARHGAP9Q9BRR9 750 aa10.77□□□□□ -0.69
APP-213ENST00000464867 MRPL9Q9BYD2 267 aaKnown RBP10.77□□□□□ -0.69
APP-213ENST00000464867 ZBP1Q9H171 429 aa10.77□□□□□ -0.69
APP-213ENST00000464867 WDR6Q9NNW5 1121 aaKnown RBP10.77□□□□□ -0.69
APP-213ENST00000464867 MAST4O15021 2626 aa10.76□□□□□ -0.69
APP-213ENST00000464867 SPEGQ15772 3267 aa10.76□□□□□ -0.69
APP-213ENST00000464867 NT5C1B-RDH14C9J2C7 533 aa10.76□□□□□ -0.69
APP-213ENST00000464867 N4BP1O75113 896 aaKnown RBP10.76□□□□□ -0.69
APP-213ENST00000464867 BCAR1P56945 870 aa10.76□□□□□ -0.69
APP-213ENST00000464867 SEMA3FQ13275 785 aa10.76□□□□□ -0.69
APP-213ENST00000464867 SNW1Q13573 536 aaKnown RBP10.76□□□□□ -0.69
APP-213ENST00000464867 ZMYM1Q5SVZ6 1142 aa10.76□□□□□ -0.69
APP-213ENST00000464867 TSSK4Q6SA08 328 aa10.76□□□□□ -0.69
APP-213ENST00000464867 DDX53Q86TM3 631 aaKnown RBP10.76□□□□□ -0.69
APP-213ENST00000464867 IQCA1Q86XH1 822 aa10.76□□□□□ -0.69
APP-213ENST00000464867 CMASQ8NFW8 434 aaPredicted RBP10.76□□□□□ -0.69
APP-213ENST00000464867 ESR2Q92731 530 aa10.76□□□□□ -0.69
APP-213ENST00000464867 NELL1Q92832 810 aa10.76□□□□□ -0.69
APP-213ENST00000464867 CDHR1Q96JP9 859 aa10.76□□□□□ -0.69
APP-213ENST00000464867 NELL2Q99435 816 aa10.76□□□□□ -0.69
APP-213ENST00000464867 PIDD1Q9HB75 910 aa10.76□□□□□ -0.69
APP-213ENST00000464867 STK39Q9UEW8 545 aa10.76□□□□□ -0.69
APP-213ENST00000464867 TELO2Q9Y4R8 837 aa10.76□□□□□ -0.69
APP-213ENST00000464867 CLUHO75153 1309 aa10.76□□□□□ -0.69
APP-213ENST00000464867 DOCK8Q8NF50 2099 aa10.75□□□□□ -0.69
APP-213ENST00000464867 ASH1LQ9NR48 2969 aaKnown RBP10.75□□□□□ -0.69
APP-213ENST00000464867 CCDC195A0A1B0GUA6 201 aa10.75□□□□□ -0.69
APP-213ENST00000464867 GSTTP1A0A1W2PQM5 241 aa10.75□□□□□ -0.69
APP-213ENST00000464867 C1QTNF9BB2RNN3 333 aa10.75□□□□□ -0.69
APP-213ENST00000464867 ZBTB5O15062 677 aa10.75□□□□□ -0.69
APP-213ENST00000464867 C1QTNF9P0C862 333 aa10.75□□□□□ -0.69
APP-213ENST00000464867 LAMP2P13473 410 aa10.75□□□□□ -0.69
APP-213ENST00000464867 CLCN4P51793 760 aa10.75□□□□□ -0.69
APP-213ENST00000464867 PFKPQ01813 784 aa10.75□□□□□ -0.69
APP-213ENST00000464867 MLF2Q15773 248 aaPredicted RBP10.75□□□□□ -0.69
APP-213ENST00000464867 MTHFD1LQ6UB35 978 aa10.75□□□□□ -0.69
APP-213ENST00000464867 RSPO2Q6UXX9 243 aaPredicted RBP10.75□□□□□ -0.69
APP-213ENST00000464867 MEIOBQ8N635 442 aa10.75□□□□□ -0.69
APP-213ENST00000464867 PHKBQ93100 1093 aa10.75□□□□□ -0.69
APP-213ENST00000464867 KLHL5Q96PQ7 755 aa10.75□□□□□ -0.69
APP-213ENST00000464867 MYADMQ96S97 322 aa10.75□□□□□ -0.69
APP-213ENST00000464867 ZKSCAN3Q9BRR0 538 aa10.75□□□□□ -0.69
APP-213ENST00000464867 RNF41Q9H4P4 317 aaPredicted RBP10.75□□□□□ -0.69
APP-213ENST00000464867 DSPP15924 2871 aaKnown RBP10.75□□□□□ -0.69
APP-213ENST00000464867 EVPLQ92817 2033 aa10.74□□□□□ -0.69
APP-213ENST00000464867 SMARCA5O60264 1052 aaPredicted RBP10.74□□□□□ -0.69
APP-213ENST00000464867 RFC5P40937 340 aa10.74□□□□□ -0.69
APP-213ENST00000464867 CRYBB1P53674 252 aaPredicted RBP10.74□□□□□ -0.69
APP-213ENST00000464867 GPC5P78333 572 aa10.74□□□□□ -0.69
APP-213ENST00000464867 RING1Q06587 406 aa10.74□□□□□ -0.69
APP-213ENST00000464867 PLCB4Q15147 1175 aa10.74□□□□□ -0.69
APP-213ENST00000464867 ALX1Q15699 326 aa10.74□□□□□ -0.69
APP-213ENST00000464867 AASDHQ4L235 1098 aaPredicted RBP10.74□□□□□ -0.69
APP-213ENST00000464867 SLC44A4Q53GD3 710 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms