RNA–Protein interactions for RNA: ENST00000464586.1

PLD3-208, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-208ENST00000464586 ZHX3Q9H4I2 956 aa9.11□□□□□ -0.95
PLD3-208ENST00000464586 SLC28A3Q9HAS3 691 aa9.11□□□□□ -0.95
PLD3-208ENST00000464586 PARVGQ9HBI0 331 aa9.11□□□□□ -0.95
PLD3-208ENST00000464586 GDPD2Q9HCC8 539 aa9.11□□□□□ -0.95
PLD3-208ENST00000464586 TMEM161AQ9NX61 479 aa9.11□□□□□ -0.95
PLD3-208ENST00000464586 USP25Q9UHP3 1055 aa9.11□□□□□ -0.95
PLD3-208ENST00000464586 KCNH3Q9ULD8 1083 aa9.11□□□□□ -0.95
PLD3-208ENST00000464586 COL4A6Q14031 1691 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 MYMKA6NI61 221 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 ACKR2O00590 384 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 TSPAN1O60635 241 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 ZNF623O75123 536 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 DGKIO75912 1065 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 PFKFB1P16118 471 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 GAP43P17677 238 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 ARF4P18085 180 aaPredicted RBP9.1□□□□□ -0.95
PLD3-208ENST00000464586 LIG1P18858 919 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 IBSPP21815 317 aaPredicted RBP9.1□□□□□ -0.95
PLD3-208ENST00000464586 PBX2P40425 430 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 SYKP43405 635 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 ZNF131P52739 623 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 CACNB1Q02641 598 aaPredicted RBP9.1□□□□□ -0.95
PLD3-208ENST00000464586 STRN3Q13033 797 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 PRPF4BQ13523 1007 aaKnown RBP9.1□□□□□ -0.95
PLD3-208ENST00000464586 AMHR2Q16671 573 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 TMCO2Q7Z6W1 182 aaPredicted RBP9.1□□□□□ -0.95
PLD3-208ENST00000464586 ECHDC2Q86YB7 292 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 MYCT1Q8N699 235 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 SLC17A8Q8NDX2 589 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 MRPS27Q92552 414 aaKnown RBP9.1□□□□□ -0.95
PLD3-208ENST00000464586 DDX12PQ92771 950 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 PGBD4Q96DM1 585 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 ADPGKQ9BRR6 497 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 NKX2-4Q9H2Z4 354 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 FAM105AQ9NUU6 356 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 KBTBD4Q9NVX7 518 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 SEL1LQ9UBV2 794 aa9.1□□□□□ -0.95
PLD3-208ENST00000464586 YBX2Q9Y2T7 364 aaKnown RBP9.1□□□□□ -0.95
PLD3-208ENST00000464586 ADGRA3Q8IWK6 1321 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 CNTNAP2Q9UHC6 1331 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 ANK1P16157 1881 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 PLXNA4Q9HCM2 1894 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 LAMA2P24043 3122 aaKnown RBP9.09□□□□□ -0.95
PLD3-208ENST00000464586 FAM237AA0A1B0GTK4 181 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 A0A1B0GUA9 196 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 A0A1B0GVL5 298 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 RBAK-RBAKDNI3L0D1 243 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 N4BP3O15049 544 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 SLC16A4O15374 487 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 TRAK2O60296 914 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 CA3P07451 260 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 SLFN14P0C7P3 912 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 MAPTP10636 758 aaKnown RBP9.09□□□□□ -0.95
PLD3-208ENST00000464586 IDEP14735 1019 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 MYOGP15173 224 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 HOXA11P31270 313 aaPredicted RBP9.09□□□□□ -0.95
PLD3-208ENST00000464586 NCKAP1LP55160 1127 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 BTG3Q14201 252 aaPredicted RBP9.09□□□□□ -0.95
PLD3-208ENST00000464586 TPRNQ4KMQ1 711 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 PPP2R2DQ66LE6 453 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 SLC27A1Q6PCB7 646 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 APBB1IPQ7Z5R6 666 aaPredicted RBP9.09□□□□□ -0.95
PLD3-208ENST00000464586 MRPL10Q7Z7H8 261 aaKnown RBP9.09□□□□□ -0.95
PLD3-208ENST00000464586 FAM178BQ8IXR5 827 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 CCDC65Q8IXS2 484 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 CMTR2Q8IYT2 770 aaKnown RBP9.09□□□□□ -0.95
PLD3-208ENST00000464586 HACE1Q8IYU2 909 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 ABI1Q8IZP0 508 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 CRIPAKQ8N1N5 446 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 FIBCD1Q8N539 461 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 FSIP1Q8NA03 581 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 RNF169Q8NCN4 708 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 SP7Q8TDD2 431 aaPredicted RBP9.09□□□□□ -0.95
PLD3-208ENST00000464586 RSPH1Q8WYR4 309 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 ZNF689Q96CS4 500 aaPredicted RBP9.09□□□□□ -0.95
PLD3-208ENST00000464586 DNAJC19Q96DA6 116 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 CCDC34Q96HJ3 373 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 CPB2Q96IY4 423 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 SAMD11Q96NU1 681 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 KIFC3Q9BVG8 833 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 MRPL4Q9BYD3 311 aaKnown RBP9.09□□□□□ -0.95
PLD3-208ENST00000464586 TRIM6Q9C030 488 aaPredicted RBP9.09□□□□□ -0.95
PLD3-208ENST00000464586 CCDC113Q9H0I3 377 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 ARHGAP28Q9P2N2 729 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 SERTAD1Q9UHV2 236 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 HPSEQ9Y251 543 aa9.09□□□□□ -0.95
PLD3-208ENST00000464586 COL4A4P53420 1690 aaPredicted RBP9.08□□□□□ -0.96
PLD3-208ENST00000464586 LCHNA4D1U4 455 aa9.08□□□□□ -0.96
PLD3-208ENST00000464586 K7ENM7 598 aa9.08□□□□□ -0.96
PLD3-208ENST00000464586 B4GALT5O43286 388 aa9.08□□□□□ -0.96
PLD3-208ENST00000464586 ITGA4P13612 1032 aa9.08□□□□□ -0.96
PLD3-208ENST00000464586 DCAF4L1Q3SXM0 396 aa9.08□□□□□ -0.96
PLD3-208ENST00000464586 HERC4Q5GLZ8 1057 aaPredicted RBP9.08□□□□□ -0.96
PLD3-208ENST00000464586 UBXN11Q5T124 520 aa9.08□□□□□ -0.96
PLD3-208ENST00000464586 ATF7IP2Q5U623 682 aa9.08□□□□□ -0.96
PLD3-208ENST00000464586 CNNM4Q6P4Q7 775 aa9.08□□□□□ -0.96
PLD3-208ENST00000464586 HAUS6Q7Z4H7 955 aa9.08□□□□□ -0.96
PLD3-208ENST00000464586 ZNF598Q86UK7 904 aaKnown RBP9.08□□□□□ -0.96
PLD3-208ENST00000464586 TMEM161BQ8NDZ6 487 aa9.08□□□□□ -0.96
PLD3-208ENST00000464586 STAMQ92783 540 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms