RNA–Protein interactions for RNA: ENST00000464225.5

CHKB-203, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-203ENST00000464225 TFDP1Q14186 410 aa11.19□□□□□ -0.62
CHKB-203ENST00000464225 SMC1AQ14683 1233 aaKnown RBP11.19□□□□□ -0.62
CHKB-203ENST00000464225 TMC7Q7Z402 723 aa11.19□□□□□ -0.62
CHKB-203ENST00000464225 MRPL10Q7Z7H8 261 aaKnown RBP11.19□□□□□ -0.62
CHKB-203ENST00000464225 CATSPER3Q86XQ3 398 aa11.19□□□□□ -0.62
CHKB-203ENST00000464225 IFNLR1Q8IU57 520 aaPredicted RBP11.19□□□□□ -0.62
CHKB-203ENST00000464225 NOSTRINQ8IVI9 506 aa11.19□□□□□ -0.62
CHKB-203ENST00000464225 MRPL43Q8N983 215 aaKnown RBP11.19□□□□□ -0.62
CHKB-203ENST00000464225 FAM184AQ8NB25 1140 aa11.19□□□□□ -0.62
CHKB-203ENST00000464225 BCL7CQ8WUZ0 217 aaPredicted RBP11.19□□□□□ -0.62
CHKB-203ENST00000464225 PGBD4Q96DM1 585 aa11.19□□□□□ -0.62
CHKB-203ENST00000464225 TMEM169Q96HH4 297 aa11.19□□□□□ -0.62
CHKB-203ENST00000464225 POLR3FQ9H1D9 316 aaPredicted RBP11.19□□□□□ -0.62
CHKB-203ENST00000464225 TUFT1Q9NNX1 390 aa11.19□□□□□ -0.62
CHKB-203ENST00000464225 DNAJB4Q9UDY4 337 aa11.19□□□□□ -0.62
CHKB-203ENST00000464225 C2orf71A6NGG8 1288 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 DCXO43602 365 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 GALTP07902 379 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 XRCC6P12956 609 aaKnown RBP eCLIP11.18□□□□□ -0.62
CHKB-203ENST00000464225 ALADP13716 330 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 NCLP19338 710 aaKnown RBP11.18□□□□□ -0.62
CHKB-203ENST00000464225 SLC11A1P49279 550 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 RNASELQ05823 741 aaKnown RBP11.18□□□□□ -0.62
CHKB-203ENST00000464225 MBTD1Q05BQ5 628 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 ORC2Q13416 577 aaPredicted RBP11.18□□□□□ -0.62
CHKB-203ENST00000464225 NBR1Q14596 966 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 PCBP1Q15365 356 aaKnown RBP eCLIP11.18□□□□□ -0.62
CHKB-203ENST00000464225 AMHR2Q16671 573 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 TTC38Q5R3I4 469 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 LLGL2Q6P1M3 1020 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 SYCE2Q6PIF2 218 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 POTEGQ6S5H5 508 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 TMEM184AQ6ZMB5 413 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 ZNF280BQ86YH2 543 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 VPS52Q8N1B4 723 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 SMG8Q8ND04 991 aaKnown RBP11.18□□□□□ -0.62
CHKB-203ENST00000464225 URGCPQ8TCY9 931 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 SUSD6Q92537 303 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 CCDC51Q96ER9 411 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 IGSF21Q96ID5 467 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 CPB2Q96IY4 423 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 EIF2AQ9BY44 585 aaKnown RBP11.18□□□□□ -0.62
CHKB-203ENST00000464225 GBP3Q9H0R5 595 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 ZBP1Q9H171 429 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 RSAD1Q9HA92 442 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 GPRC5CQ9NQ84 441 aa11.18□□□□□ -0.62
CHKB-203ENST00000464225 CNTNAP2Q9UHC6 1331 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 CARNS1A5YM72 827 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 B4GALT5O43286 388 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 CLASP2O75122 1294 aaKnown RBP11.17□□□□□ -0.62
CHKB-203ENST00000464225 DDHD2O94830 711 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 SRGAP2BP0DMP2 458 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 ARF4P18085 180 aaPredicted RBP11.17□□□□□ -0.62
CHKB-203ENST00000464225 RPA1P27694 616 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 AXLP30530 894 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 CA8P35219 290 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 TRAPPC10P48553 1259 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 POU5F1BQ06416 359 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 GNL2Q13823 731 aaKnown RBP11.17□□□□□ -0.62
CHKB-203ENST00000464225 RABEP1Q15276 862 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 ANKRD54Q6NXT1 300 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 NOTUMQ6P988 496 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 MAEAQ7L5Y9 396 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 DDX53Q86TM3 631 aaKnown RBP11.17□□□□□ -0.62
CHKB-203ENST00000464225 RNF135Q8IUD6 432 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 C4orf32Q8N8J7 132 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 AUTS2Q8WXX7 1259 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 POLR3CQ9BUI4 534 aaPredicted RBP11.17□□□□□ -0.62
CHKB-203ENST00000464225 APOL5Q9BWW9 433 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 VN1R3Q9BXE9 311 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 NFKBIZQ9BYH8 718 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 S1PR5Q9H228 398 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 MUTYHQ9UIF7 546 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 DBR1Q9UK59 544 aaKnown RBP11.17□□□□□ -0.62
CHKB-203ENST00000464225 HES2Q9Y543 173 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 IPPQ9Y573 584 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 HCFC2Q9Y5Z7 792 aa11.17□□□□□ -0.62
CHKB-203ENST00000464225 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.16□□□□□ -0.62
CHKB-203ENST00000464225 LRRIQ4A6NIV6 560 aa11.16□□□□□ -0.62
CHKB-203ENST00000464225 LOC730098B7Z3J9 87 aa11.16□□□□□ -0.62
CHKB-203ENST00000464225 CXCL14O95715 111 aa11.16□□□□□ -0.62
CHKB-203ENST00000464225 POMCP01189 267 aa11.16□□□□□ -0.62
CHKB-203ENST00000464225 CTSAP10619 480 aa11.16□□□□□ -0.62
CHKB-203ENST00000464225 ITGA4P13612 1032 aa11.16□□□□□ -0.62
CHKB-203ENST00000464225 U2AF2P26368 475 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHKB-203ENST00000464225 MLH1P40692 756 aa11.16□□□□□ -0.62
CHKB-203ENST00000464225 TOB1P50616 345 aaPredicted RBP11.16□□□□□ -0.62
CHKB-203ENST00000464225 CDR2LQ86X02 465 aaPredicted RBP11.16□□□□□ -0.62
CHKB-203ENST00000464225 CNNM3Q8NE01 707 aa11.16□□□□□ -0.62
CHKB-203ENST00000464225 MCPH1Q8NEM0 835 aa11.16□□□□□ -0.62
CHKB-203ENST00000464225 ERMNQ8TAM6 284 aa11.16□□□□□ -0.62
CHKB-203ENST00000464225 CASP10Q92851 521 aa11.16□□□□□ -0.62
CHKB-203ENST00000464225 NACC1Q96RE7 527 aa11.16□□□□□ -0.62
CHKB-203ENST00000464225 GAD1Q99259 594 aa11.16□□□□□ -0.62
CHKB-203ENST00000464225 PHF7Q9BWX1 381 aaPredicted RBP11.16□□□□□ -0.62
CHKB-203ENST00000464225 CSRNP2Q9H175 543 aa11.16□□□□□ -0.62
CHKB-203ENST00000464225 NXF3Q9H4D5 531 aaKnown RBP11.16□□□□□ -0.62
CHKB-203ENST00000464225 KANSL3Q9P2N6 904 aa11.16□□□□□ -0.62
CHKB-203ENST00000464225 CDH22Q9UJ99 828 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms