RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 KANSL3Q9P2N6 904 aa14.93□□□□□ -0.02
MRPL55-224ENST00000464148 SSX2IPQ9Y2D8 614 aa14.93□□□□□ -0.02
MRPL55-224ENST00000464148 DNAH14Q0VDD8 3507 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 IGKV6-21A0A0C4DH24 114 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 DDX11L8A8MPP1 907 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 NRP1O14786 923 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 LILRB3O75022 631 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 POMCP01189 267 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 ADH1AP07327 375 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 USP11P51784 963 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 ADCK5Q3MIX3 580 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 ZC3H14Q6PJT7 736 aaKnown RBP14.92□□□□□ -0.02
MRPL55-224ENST00000464148 AGMOQ6ZNB7 445 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 SLC44A3Q8N4M1 653 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 CCDC148Q8NFR7 591 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 RDM1Q8NG50 284 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 TMEM175Q9BSA9 504 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 RSAD1Q9HA92 442 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 WDR6Q9NNW5 1121 aaKnown RBP14.92□□□□□ -0.02
MRPL55-224ENST00000464148 CLUHO75153 1309 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 CNTNAP2Q9UHC6 1331 aa14.92□□□□□ -0.02
MRPL55-224ENST00000464148 MED19A0JLT2 244 aaPredicted RBP14.91□□□□□ -0.02
MRPL55-224ENST00000464148 INPPL1O15357 1258 aa14.91□□□□□ -0.02
MRPL55-224ENST00000464148 PRPF3O43395 683 aaKnown RBP14.91□□□□□ -0.02
MRPL55-224ENST00000464148 MAFO75444 373 aaPredicted RBP14.91□□□□□ -0.02
MRPL55-224ENST00000464148 GLUD1P00367 558 aa14.91□□□□□ -0.02
MRPL55-224ENST00000464148 SOD2P04179 222 aa14.91□□□□□ -0.02
MRPL55-224ENST00000464148 DCNP07585 359 aaKnown RBP14.91□□□□□ -0.02
MRPL55-224ENST00000464148 SRFP11831 508 aa14.91□□□□□ -0.02
MRPL55-224ENST00000464148 CYP26C1Q6V0L0 522 aa14.91□□□□□ -0.02
MRPL55-224ENST00000464148 SMG7Q92540 1137 aaKnown RBP14.91□□□□□ -0.02
MRPL55-224ENST00000464148 PHKBQ93100 1093 aa14.91□□□□□ -0.02
MRPL55-224ENST00000464148 NXPE3Q969Y0 559 aa14.91□□□□□ -0.02
MRPL55-224ENST00000464148 RPS6KC1Q96S38 1066 aa14.91□□□□□ -0.02
MRPL55-224ENST00000464148 CEP89Q96ST8 783 aa14.91□□□□□ -0.02
MRPL55-224ENST00000464148 JPH2Q9BR39 696 aaPredicted RBP14.91□□□□□ -0.02
MRPL55-224ENST00000464148 PIDD1Q9HB75 910 aa14.91□□□□□ -0.02
MRPL55-224ENST00000464148 AGPAT5Q9NUQ2 364 aa14.91□□□□□ -0.02
MRPL55-224ENST00000464148 EPS15L1Q9UBC2 864 aa14.91□□□□□ -0.02
MRPL55-224ENST00000464148 PRG3Q9Y2Y8 225 aaPredicted RBP14.91□□□□□ -0.02
MRPL55-224ENST00000464148 SIT1Q9Y3P8 196 aa14.91□□□□□ -0.02
MRPL55-224ENST00000464148 TEX28O15482 410 aa14.9□□□□□ -0.02
MRPL55-224ENST00000464148 RFPL2O75678 378 aa14.9□□□□□ -0.02
MRPL55-224ENST00000464148 PSMD10O75832 226 aa14.9□□□□□ -0.02
MRPL55-224ENST00000464148 STBD1O95210 358 aa14.9□□□□□ -0.02
MRPL55-224ENST00000464148 HMGB1P09429 215 aaKnown RBP14.9□□□□□ -0.02
MRPL55-224ENST00000464148 SPATA31D3P0C874 917 aa14.9□□□□□ -0.02
MRPL55-224ENST00000464148 GLUD2P49448 558 aa14.9□□□□□ -0.02
MRPL55-224ENST00000464148 AFF1P51825 1210 aaKnown RBP14.9□□□□□ -0.02
MRPL55-224ENST00000464148 KRT32Q14532 448 aa14.9□□□□□ -0.02
MRPL55-224ENST00000464148 SPATA31D4Q6ZUB0 917 aa14.9□□□□□ -0.02
MRPL55-224ENST00000464148 TAS1R1Q7RTX1 841 aa14.9□□□□□ -0.02
MRPL55-224ENST00000464148 MRPL10Q7Z7H8 261 aaKnown RBP14.9□□□□□ -0.02
MRPL55-224ENST00000464148 RASEFQ8IZ41 740 aa14.9□□□□□ -0.02
MRPL55-224ENST00000464148 GPR152Q8TDT2 470 aa14.9□□□□□ -0.02
MRPL55-224ENST00000464148 MYADMQ96S97 322 aa14.9□□□□□ -0.02
MRPL55-224ENST00000464148 HERC2P3Q9BVR0 1158 aa14.9□□□□□ -0.02
MRPL55-224ENST00000464148 EP300Q09472 2414 aaPredicted RBP14.9□□□□□ -0.02
MRPL55-224ENST00000464148 SP9P0CG40 484 aa14.89□□□□□ -0.03
MRPL55-224ENST00000464148 SRGAP2CP0DJJ0 459 aa14.89□□□□□ -0.03
MRPL55-224ENST00000464148 OR1G1P47890 313 aa14.89□□□□□ -0.03
MRPL55-224ENST00000464148 PUM1Q14671 1186 aaKnown RBP eCLIP14.89□□□□□ -0.03
MRPL55-224ENST00000464148 TSGA10IPQ3SY00 556 aa14.89□□□□□ -0.03
MRPL55-224ENST00000464148 PHLDB3Q6NSJ2 640 aa14.89□□□□□ -0.03
MRPL55-224ENST00000464148 PALB2Q86YC2 1186 aa14.89□□□□□ -0.03
MRPL55-224ENST00000464148 C1orf210Q8IVY1 113 aa14.89□□□□□ -0.03
MRPL55-224ENST00000464148 RUBCNQ92622 972 aa14.89□□□□□ -0.03
MRPL55-224ENST00000464148 RHOBTB2Q9BYZ6 727 aa14.89□□□□□ -0.03
MRPL55-224ENST00000464148 IFT122Q9HBG6 1241 aa14.89□□□□□ -0.03
MRPL55-224ENST00000464148 ARHGEF3Q9NR81 526 aa14.89□□□□□ -0.03
MRPL55-224ENST00000464148 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.89□□□□□ -0.03
MRPL55-224ENST00000464148 VPS54Q9P1Q0 977 aa14.89□□□□□ -0.03
MRPL55-224ENST00000464148 COL4A3BPQ9Y5P4 624 aa14.89□□□□□ -0.03
MRPL55-224ENST00000464148 EDIL3O43854 480 aa14.88□□□□□ -0.03
MRPL55-224ENST00000464148 ITGA4P13612 1032 aa14.88□□□□□ -0.03
MRPL55-224ENST00000464148 NLRP5P59047 1200 aa14.88□□□□□ -0.03
MRPL55-224ENST00000464148 Q4G0T1 1027 aa14.88□□□□□ -0.03
MRPL55-224ENST00000464148 PLA2G4FQ68DD2 849 aa14.88□□□□□ -0.03
MRPL55-224ENST00000464148 DCLRE1AQ6PJP8 1040 aa14.88□□□□□ -0.03
MRPL55-224ENST00000464148 Q6ZUG5 572 aa14.88□□□□□ -0.03
MRPL55-224ENST00000464148 ANO5Q75V66 913 aa14.88□□□□□ -0.03
MRPL55-224ENST00000464148 GET4Q7L5D6 327 aaPredicted RBP14.88□□□□□ -0.03
MRPL55-224ENST00000464148 TBCKQ8TEA7 893 aa14.88□□□□□ -0.03
MRPL55-224ENST00000464148 SLC7A3Q8WY07 619 aa14.88□□□□□ -0.03
MRPL55-224ENST00000464148 BRF1Q92994 677 aa14.88□□□□□ -0.03
MRPL55-224ENST00000464148 SLC26A6Q9BXS9 759 aa14.88□□□□□ -0.03
MRPL55-224ENST00000464148 UBN1Q9NPG3 1134 aa14.88□□□□□ -0.03
MRPL55-224ENST00000464148 MARCH5Q9NX47 278 aa14.88□□□□□ -0.03
MRPL55-224ENST00000464148 GAS2O43903 313 aaKnown RBP14.87□□□□□ -0.03
MRPL55-224ENST00000464148 NR1I2O75469 434 aa14.87□□□□□ -0.03
MRPL55-224ENST00000464148 TDP2O95551 362 aa14.87□□□□□ -0.03
MRPL55-224ENST00000464148 LAMP2P13473 410 aa14.87□□□□□ -0.03
MRPL55-224ENST00000464148 CPA1P15085 419 aa14.87□□□□□ -0.03
MRPL55-224ENST00000464148 NCLP19338 710 aaKnown RBP14.87□□□□□ -0.03
MRPL55-224ENST00000464148 PSMC5P62195 406 aa14.87□□□□□ -0.03
MRPL55-224ENST00000464148 UBXN11Q5T124 520 aa14.87□□□□□ -0.03
MRPL55-224ENST00000464148 KIAA0319Q5VV43 1072 aa14.87□□□□□ -0.03
MRPL55-224ENST00000464148 SRGAP1Q7Z6B7 1085 aa14.87□□□□□ -0.03
MRPL55-224ENST00000464148 COLGALT2Q8IYK4 626 aa14.87□□□□□ -0.03
MRPL55-224ENST00000464148 DCLK2Q8N568 766 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms