RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 SREBF2Q12772 1141 aa6.51□□□□□ -1.37
CD46-211ENST00000464082 RRP1BQ14684 758 aaKnown RBP6.51□□□□□ -1.37
CD46-211ENST00000464082 CRB2Q5IJ48 1285 aa6.51□□□□□ -1.37
CD46-211ENST00000464082 NOL9Q5SY16 702 aaKnown RBP6.51□□□□□ -1.37
CD46-211ENST00000464082 CRIP3Q6Q6R5 217 aa6.51□□□□□ -1.37
CD46-211ENST00000464082 DZIP1Q86YF9 867 aaKnown RBP6.51□□□□□ -1.37
CD46-211ENST00000464082 JAMLQ86YT9 394 aa6.51□□□□□ -1.37
CD46-211ENST00000464082 TMEM192Q8IY95 271 aa6.51□□□□□ -1.37
CD46-211ENST00000464082 FAM43AQ8N2R8 423 aa6.51□□□□□ -1.37
CD46-211ENST00000464082 DVL3Q92997 716 aaPredicted RBP6.51□□□□□ -1.37
CD46-211ENST00000464082 WRNIP1Q96S55 665 aa6.51□□□□□ -1.37
CD46-211ENST00000464082 SSBP3Q9BWW4 388 aaPredicted RBP6.51□□□□□ -1.37
CD46-211ENST00000464082 ANTXR1Q9H6X2 564 aa6.51□□□□□ -1.37
CD46-211ENST00000464082 RXFP1Q9HBX9 757 aa6.51□□□□□ -1.37
CD46-211ENST00000464082 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.51□□□□□ -1.37
CD46-211ENST00000464082 FBXL21Q9UKT6 434 aa6.51□□□□□ -1.37
CD46-211ENST00000464082 DDX19BQ9UMR2 479 aa6.51□□□□□ -1.37
CD46-211ENST00000464082 ADGRA2Q96PE1 1338 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 A0A1W2PQJ5 194 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 CYR61O00622 381 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 BRD1O95696 1058 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 PMLP29590 882 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 INHBEP58166 350 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 CRHR2Q13324 411 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 SNAP47Q5SQN1 464 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 TTC39AQ5SRH9 613 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 CDCP2Q5VXM1 449 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 HLA-DQA1Q5Y7H0 255 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 SPTY2D1Q68D10 685 aaPredicted RBP6.5□□□□□ -1.37
CD46-211ENST00000464082 ERO1BQ86YB8 467 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 RPAP2Q8IXW5 612 aaPredicted RBP6.5□□□□□ -1.37
CD46-211ENST00000464082 NAT16Q8N8M0 369 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 CHST13Q8NET6 341 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 ALG3Q92685 438 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 SLC12A9Q9BXP2 914 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 ZNF341Q9BYN7 854 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 MKRN2Q9H000 416 aaKnown RBP6.5□□□□□ -1.37
CD46-211ENST00000464082 OSBPL5Q9H0X9 879 aaPredicted RBP6.5□□□□□ -1.37
CD46-211ENST00000464082 DNAJC18Q9H819 358 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 IL1RAPL2Q9NP60 686 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 PDLIM7Q9NR12 457 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 TMOD2Q9NZR1 351 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 PCDHB14Q9Y5E9 798 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 PCDHB12Q9Y5F1 795 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 ALPK3Q96L96 1907 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 FRMPD3Q5JV73 1810 aa6.5□□□□□ -1.37
CD46-211ENST00000464082 CCL15-CCL14A0A0B4J2E2 113 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 MINDY4BA8MYZ0 360 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 BTBD19C9JJ37 291 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 CHGBP05060 677 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 GARTP22102 1010 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 PPIL2Q13356 520 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 OS9Q13438 667 aaPredicted RBP6.49□□□□□ -1.37
CD46-211ENST00000464082 PICALMQ13492 652 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 CDSNQ15517 529 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 CCL15Q16663 113 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 SHROOM1Q2M3G4 852 aaPredicted RBP6.49□□□□□ -1.37
CD46-211ENST00000464082 CCDC158Q5M9N0 1113 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 GORABQ5T7V8 394 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 DCAF15Q66K64 600 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 CTU1Q7Z7A3 348 aaKnown RBP6.49□□□□□ -1.37
CD46-211ENST00000464082 AACSQ86V21 672 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 SMARCC2Q8TAQ2 1214 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 ADAMTS17Q8TE56 1095 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 ATG4CQ96DT6 458 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 EDC3Q96F86 508 aaKnown RBP6.49□□□□□ -1.37
CD46-211ENST00000464082 CNNM2Q9H8M5 875 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 BRMS1Q9HCU9 246 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 AATFQ9NY61 560 aaKnown RBP eCLIP6.49□□□□□ -1.37
CD46-211ENST00000464082 RAI14Q9P0K7 980 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 NTMQ9P121 344 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 DBR1Q9UK59 544 aaKnown RBP6.49□□□□□ -1.37
CD46-211ENST00000464082 A0A0G2JMZ2 1700 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 FLT1P17948 1338 aa6.49□□□□□ -1.37
CD46-211ENST00000464082 TCRBV5S4A2TA0A5A2 114 aa6.48□□□□□ -1.37
CD46-211ENST00000464082 MAP4K4O95819 1239 aaPredicted RBP6.48□□□□□ -1.37
CD46-211ENST00000464082 CTGFP29279 349 aa6.48□□□□□ -1.37
CD46-211ENST00000464082 RGS19P49795 217 aa6.48□□□□□ -1.37
CD46-211ENST00000464082 GTF2A2P52657 109 aa6.48□□□□□ -1.37
CD46-211ENST00000464082 DYNLL1P63167 89 aaKnown RBP6.48□□□□□ -1.37
CD46-211ENST00000464082 PPATQ06203 517 aa6.48□□□□□ -1.37
CD46-211ENST00000464082 NAA16Q6N069 864 aaPredicted RBP6.48□□□□□ -1.37
CD46-211ENST00000464082 OTOP1Q7RTM1 612 aa6.48□□□□□ -1.37
CD46-211ENST00000464082 LIMS2Q7Z4I7 341 aa6.48□□□□□ -1.37
CD46-211ENST00000464082 METTL16Q86W50 562 aaKnown RBP6.48□□□□□ -1.37
CD46-211ENST00000464082 ERC1Q8IUD2 1116 aa6.48□□□□□ -1.37
CD46-211ENST00000464082 SCYL3Q8IZE3 742 aa6.48□□□□□ -1.37
CD46-211ENST00000464082 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.48□□□□□ -1.37
CD46-211ENST00000464082 KIF1BPQ96EK5 621 aa6.48□□□□□ -1.37
CD46-211ENST00000464082 AFG3L2Q9Y4W6 797 aa6.48□□□□□ -1.37
CD46-211ENST00000464082 SMCHD1A6NHR9 2005 aa6.48□□□□□ -1.37
CD46-211ENST00000464082 SMARCA5O60264 1052 aaPredicted RBP6.47□□□□□ -1.37
CD46-211ENST00000464082 IGSF3O75054 1194 aa6.47□□□□□ -1.37
CD46-211ENST00000464082 RAB11FIP3O75154 756 aa6.47□□□□□ -1.37
CD46-211ENST00000464082 ATE1O95260 518 aa6.47□□□□□ -1.37
CD46-211ENST00000464082 LDHCP07864 332 aa6.47□□□□□ -1.37
CD46-211ENST00000464082 RRP1P56182 461 aaKnown RBP6.47□□□□□ -1.37
CD46-211ENST00000464082 GSTO1P78417 241 aa6.47□□□□□ -1.37
CD46-211ENST00000464082 SMAD4Q13485 552 aaKnown RBP6.47□□□□□ -1.37
CD46-211ENST00000464082 AUHQ13825 339 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms