RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 GDAP1Q8TB36 358 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 UIMC1Q96RL1 719 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 LRRC2Q9BYS8 371 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 FAM192AQ9GZU8 254 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 PSTPIP2Q9H939 334 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 RNPEPL1Q9HAU8 725 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 ETNK1Q9HBU6 452 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 EPB41L5Q9HCM4 733 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 KCNMB3Q9NPA1 279 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 GINM1Q9NU53 330 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 NMRK1Q9NWW6 199 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 RNF186Q9NXI6 227 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 CLIC5Q9NZA1 410 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 CTTNBP2NLQ9P2B4 639 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 MTUS1Q9ULD2 1270 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 ZNF541Q9H0D2 1346 aa3.88□□□□□ -1.79
COL8A1-205ENST00000463753 A0A1W2PP64 1363 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 C5orf60A6NFR6 353 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 SPECC1L-ADORA2AF8WAN1 911 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 IFIT3O14879 490 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 MGEA5O60502 916 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 MFAP3LO75121 409 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TBCAO75347 108 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TJP3O95049 919 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 ASMTLO95671 621 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 APOEP02649 317 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 S100BP04271 92 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 ZFYP08048 801 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 IDO1P14902 403 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 VAV1P15498 845 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 PFKFB1P16118 471 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 CTNNA1P35221 906 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 SLC16A2P36021 539 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 CCT6AP40227 531 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 CCNG1P51959 295 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 STX17P56962 302 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 RASSF7Q02833 373 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 SULT2A1Q06520 285 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 SREBF2Q12772 1141 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TNIP1Q15025 636 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 CCDC152Q4G0S7 254 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 ADALQ6DHV7 355 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 LRRC34Q8IZ02 419 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 KDF1Q8NAX2 398 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TTC8Q8TAM2 541 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 STK32AQ8WU08 396 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 UBLCP1Q8WVY7 318 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 PRPF31Q8WWY3 499 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 ANKRD27Q96NW4 1050 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TIPINQ9BVW5 301 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 CCDC113Q9H0I3 377 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 RAB17Q9H0T7 212 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 GLT8D2Q9H1C3 349 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 DHX36Q9H2U1 1008 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TRPC7Q9HCX4 862 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 PDP2Q9P2J9 529 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 ZNF148Q9UQR1 794 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 LRCH1Q9Y2L9 728 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 NOX1Q9Y5S8 564 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 CLIC4Q9Y696 253 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 FAM187AA6NFU0 413 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 GNAT3A8MTJ3 354 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 PRC1O43663 620 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 COBLO75128 1261 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 RPS6KA4O75676 772 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 B3GALNT1O75752 331 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 ALDH1L1O75891 902 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 DKK1O94907 266 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TPBGLP0DKB5 382 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TKTP29401 623 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 EPHX2P34913 555 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 ADD1P35611 737 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 RNASE9P60153 205 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 NAA20P61599 178 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 SMAD3P84022 425 aaKnown RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TRADDQ15628 312 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 PCSK7Q16549 785 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 PKDCCQ504Y2 493 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 LIN52Q52LA3 116 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 EAPPQ56P03 285 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TMTC4Q5T4D3 741 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 METTL21CQ5VZV1 264 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 OTUD7BQ6GQQ9 843 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 UBE3BQ7Z3V4 1068 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 RTKN2Q8IZC4 609 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 IQCKQ8N0W5 287 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 C8orf58Q8NAV2 365 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 PLPP7Q8NBV4 271 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 RBBP8NLQ8NC74 664 aaPredicted RBP3.87□□□□□ -1.79
COL8A1-205ENST00000463753 SPATA4Q8NEY3 305 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 PIGOQ8TEQ8 1089 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 CAVIN3Q969G5 261 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 CCDC42Q96M95 316 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 HEPHQ9BQS7 1158 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 TMBIM4Q9HC24 238 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 CYP39A1Q9NYL5 469 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 SELENONQ9NZV5 590 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 SLC12A6Q9UHW9 1150 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 ITGB1BP2Q9UKP3 347 aa3.87□□□□□ -1.79
COL8A1-205ENST00000463753 DSEQ9UL01 958 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms