RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 PANX2Q96RD6 677 aa20.76■□□□□ 0.91
CCDC78-206ENST00000463539 TTC26A0AVF1 554 aa20.75■□□□□ 0.91
CCDC78-206ENST00000463539 MAPK13O15264 365 aa20.75■□□□□ 0.91
CCDC78-206ENST00000463539 GNRH1P01148 92 aa20.75■□□□□ 0.91
CCDC78-206ENST00000463539 SMIM10L2AP0DMW4 78 aa20.75■□□□□ 0.91
CCDC78-206ENST00000463539 SMIM10L2BP0DMW5 78 aa20.75■□□□□ 0.91
CCDC78-206ENST00000463539 PRKAR2AP13861 404 aaKnown RBP20.75■□□□□ 0.91
CCDC78-206ENST00000463539 BFSP1Q12934 665 aa20.75■□□□□ 0.91
CCDC78-206ENST00000463539 FIGNQ5HY92 759 aa20.75■□□□□ 0.91
CCDC78-206ENST00000463539 MARCH8Q5T0T0 291 aa20.75■□□□□ 0.91
CCDC78-206ENST00000463539 KATNAL1Q9BW62 490 aa20.75■□□□□ 0.91
CCDC78-206ENST00000463539 TTYH3Q9C0H2 523 aa20.75■□□□□ 0.91
CCDC78-206ENST00000463539 MMRN2Q9H8L6 949 aa20.75■□□□□ 0.91
CCDC78-206ENST00000463539 SPC25Q9HBM1 224 aa20.75■□□□□ 0.91
CCDC78-206ENST00000463539 FAM207AQ9NSI2 230 aaPredicted RBP20.75■□□□□ 0.91
CCDC78-206ENST00000463539 SETD4Q9NVD3 440 aa20.75■□□□□ 0.91
CCDC78-206ENST00000463539 AKT3Q9Y243 479 aa20.75■□□□□ 0.91
CCDC78-206ENST00000463539 LUC7L2Q9Y383 392 aaKnown RBP20.75■□□□□ 0.91
CCDC78-206ENST00000463539 NRCAMQ92823 1304 aa20.75■□□□□ 0.91
CCDC78-206ENST00000463539 RARBP10826 455 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 PSEN2P49810 448 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 GJA9P57773 515 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 SNRNP35Q16560 246 aaKnown RBP20.74■□□□□ 0.91
CCDC78-206ENST00000463539 KIAA1524Q8TCG1 905 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 LMBR1Q8WVP7 490 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 SAAL1Q96ER3 474 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 ERO1AQ96HE7 468 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 MAP7D2Q96T17 732 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 BAG1Q99933 345 aaPredicted RBP20.74■□□□□ 0.91
CCDC78-206ENST00000463539 CCDC113Q9H0I3 377 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 TMX1Q9H3N1 280 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 SAGE1Q9NXZ1 904 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 CAPN11Q9UMQ6 739 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 THSD7BQ9C0I4 1608 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 GOLGA8IPA6NC78 632 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 GOLGA8JA6NMD2 632 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 KRT9P35527 623 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 MAPK6Q16659 721 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 ZSWIM2Q8NEG5 633 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 RAET1EQ8TD07 263 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 TARS2Q9BW92 718 aaKnown RBP20.74■□□□□ 0.91
CCDC78-206ENST00000463539 ABHD10Q9NUJ1 306 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 USP20Q9Y2K6 914 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 STYXL1Q9Y6J8 313 aa20.74■□□□□ 0.91
CCDC78-206ENST00000463539 PCNTO95613 3336 aa20.73■□□□□ 0.91
CCDC78-206ENST00000463539 CASP8AP2Q9UKL3 1982 aa20.73■□□□□ 0.91
CCDC78-206ENST00000463539 RNF225M0QZC1 329 aaPredicted RBP20.73■□□□□ 0.91
CCDC78-206ENST00000463539 HAS3O00219 553 aa20.73■□□□□ 0.91
CCDC78-206ENST00000463539 KPNA6O60684 536 aa20.73■□□□□ 0.91
CCDC78-206ENST00000463539 HMGCRP04035 888 aa20.73■□□□□ 0.91
CCDC78-206ENST00000463539 PHKA2P46019 1235 aa20.73■□□□□ 0.91
CCDC78-206ENST00000463539 PURAQ00577 322 aaKnown RBP20.73■□□□□ 0.91
CCDC78-206ENST00000463539 KCNMA1Q12791 1236 aa20.73■□□□□ 0.91
CCDC78-206ENST00000463539 SLFN12LQ6IEE8 588 aa20.73■□□□□ 0.91
CCDC78-206ENST00000463539 NFRKBQ6P4R8 1299 aa20.73■□□□□ 0.91
CCDC78-206ENST00000463539 CBWD2Q8IUF1 395 aa20.73■□□□□ 0.91
CCDC78-206ENST00000463539 NEK11Q8NG66 645 aa20.73■□□□□ 0.91
CCDC78-206ENST00000463539 ZNF668Q96K58 619 aaPredicted RBP20.73■□□□□ 0.91
CCDC78-206ENST00000463539 CRACR2AQ9BSW2 395 aa20.73■□□□□ 0.91
CCDC78-206ENST00000463539 MRPL4Q9BYD3 311 aaKnown RBP20.73■□□□□ 0.91
CCDC78-206ENST00000463539 NFKBIZQ9BYH8 718 aa20.73■□□□□ 0.91
CCDC78-206ENST00000463539 A0A1W2PQJ5 194 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 MYADML2A6NDP7 307 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 KIAA0391O15091 583 aaKnown RBP20.72■□□□□ 0.91
CCDC78-206ENST00000463539 MSCO60682 206 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 FKTNO75072 461 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 PRKCBP05771 671 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 TRIM49P0CI25 452 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 TRIM49CP0CI26 452 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 VAMP7P51809 220 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 PTENP60484 403 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 ARHGEF6Q15052 776 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 GNASQ5JWF2 1037 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 ZPBP2Q6X784 338 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 TMEM139Q8IV31 216 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 GPD1LQ8N335 351 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 FBXL18Q96ME1 805 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 UPF3AQ9H1J1 476 aaKnown RBP20.72■□□□□ 0.91
CCDC78-206ENST00000463539 ANKFY1Q9P2R3 1169 aa20.72■□□□□ 0.91
CCDC78-206ENST00000463539 INO80B-WBP1J3KQ70 363 aa20.71■□□□□ 0.91
CCDC78-206ENST00000463539 STX10O60499 249 aa20.71■□□□□ 0.91
CCDC78-206ENST00000463539 PGK1P00558 417 aa20.71■□□□□ 0.91
CCDC78-206ENST00000463539 EDN1P05305 212 aa20.71■□□□□ 0.91
CCDC78-206ENST00000463539 ADRB2P07550 413 aa20.71■□□□□ 0.91
CCDC78-206ENST00000463539 CCND3P30281 292 aaPredicted RBP20.71■□□□□ 0.91
CCDC78-206ENST00000463539 POU5F1BQ06416 359 aa20.71■□□□□ 0.91
CCDC78-206ENST00000463539 ZNF397Q8NF99 534 aaPredicted RBP20.71■□□□□ 0.91
CCDC78-206ENST00000463539 LSM14BQ9BX40 385 aaKnown RBP20.71■□□□□ 0.91
CCDC78-206ENST00000463539 INO80BQ9C086 356 aaPredicted RBP20.71■□□□□ 0.91
CCDC78-206ENST00000463539 GTPBP10A4D1E9 387 aaKnown RBP20.71■□□□□ 0.91
CCDC78-206ENST00000463539 ZNF500O60304 480 aaPredicted RBP20.71■□□□□ 0.91
CCDC78-206ENST00000463539 VTNP04004 478 aa20.71■□□□□ 0.91
CCDC78-206ENST00000463539 MATR3P43243 847 aaKnown RBP eCLIP20.71■□□□□ 0.91
CCDC78-206ENST00000463539 FMO5P49326 533 aa20.71■□□□□ 0.91
CCDC78-206ENST00000463539 ZBED6P86452 979 aa20.71■□□□□ 0.91
CCDC78-206ENST00000463539 HSP90AA2PQ14568 343 aaPredicted RBP20.71■□□□□ 0.91
CCDC78-206ENST00000463539 EXOC3L4Q17RC7 722 aa20.71■□□□□ 0.91
CCDC78-206ENST00000463539 OR8K1Q8NGG5 319 aa20.71■□□□□ 0.91
CCDC78-206ENST00000463539 ZNF296Q8WUU4 475 aaPredicted RBP20.71■□□□□ 0.91
CCDC78-206ENST00000463539 DNAJC7Q99615 494 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms