RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 C2CD2LO14523 706 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 ZBTB39O15060 712 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 CCNT1O60563 726 aaKnown RBP17.12■□□□□ 0.33
CMSS1-202ENST00000463526 GFRA3O60609 400 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 DKC1O60832 514 aaKnown RBP eCLIP17.12■□□□□ 0.332e-7■■■■■ 49.8
CMSS1-202ENST00000463526 ALDH2P05091 517 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 MYBP10242 640 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 LAMTOR4Q0VGL1 99 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 PPP2R5CQ13362 524 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 NCAPH2Q6IBW4 605 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 PIK3AP1Q6ZUJ8 805 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 SRGAP1Q7Z6B7 1085 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 NEK8Q86SG6 692 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 OXER1Q8TDS5 423 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 RSPH1Q8WYR4 309 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 FAM20AQ96MK3 541 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 KLHL5Q96PQ7 755 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 EMILIN2Q9BXX0 1053 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 KCNMB3Q9NPA1 279 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 RGL1Q9NZL6 768 aa17.12■□□□□ 0.33
CMSS1-202ENST00000463526 CACNA1HO95180 2353 aa17.11■□□□□ 0.33
CMSS1-202ENST00000463526 CARNS1A5YM72 827 aa17.11■□□□□ 0.33
CMSS1-202ENST00000463526 CNPP09543 421 aaKnown RBP17.11■□□□□ 0.33
CMSS1-202ENST00000463526 HOXA11P31270 313 aaPredicted RBP17.11■□□□□ 0.33
CMSS1-202ENST00000463526 CTTNQ14247 550 aaKnown RBP17.11■□□□□ 0.33
CMSS1-202ENST00000463526 EPHA7Q15375 998 aa17.11■□□□□ 0.33
CMSS1-202ENST00000463526 XKR9Q5GH70 373 aa17.11■□□□□ 0.33
CMSS1-202ENST00000463526 UBXN11Q5T124 520 aa17.11■□□□□ 0.33
CMSS1-202ENST00000463526 MRPL10Q7Z7H8 261 aaKnown RBP17.11■□□□□ 0.33
CMSS1-202ENST00000463526 PPFIBP1Q86W92 1011 aa17.11■□□□□ 0.33
CMSS1-202ENST00000463526 ZDHHC14Q8IZN3 488 aa17.11■□□□□ 0.33
CMSS1-202ENST00000463526 PLCD3Q8N3E9 789 aa17.11■□□□□ 0.33
CMSS1-202ENST00000463526 TMEM105Q8N8V8 129 aa17.11■□□□□ 0.33
CMSS1-202ENST00000463526 RNF149Q8NC42 400 aa17.11■□□□□ 0.33
CMSS1-202ENST00000463526 HAS1Q92839 578 aa17.11■□□□□ 0.33
CMSS1-202ENST00000463526 DYDC2Q96IM9 177 aa17.11■□□□□ 0.33
CMSS1-202ENST00000463526 LXNQ9BS40 222 aa17.11■□□□□ 0.33
CMSS1-202ENST00000463526 PHF20Q9BVI0 1012 aa17.11■□□□□ 0.33
CMSS1-202ENST00000463526 MFSD1Q9H3U5 465 aa17.11■□□□□ 0.33
CMSS1-202ENST00000463526 DHX33Q9H6R0 707 aaKnown RBP17.11■□□□□ 0.33
CMSS1-202ENST00000463526 PRG3Q9Y2Y8 225 aaPredicted RBP17.11■□□□□ 0.33
CMSS1-202ENST00000463526 KMT2EQ8IZD2 1858 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 NRP1O14786 923 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 GALR2O43603 387 aaPredicted RBP17.1■□□□□ 0.33
CMSS1-202ENST00000463526 ST18O60284 1047 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 YWHABP31946 246 aaKnown RBP17.1■□□□□ 0.33
CMSS1-202ENST00000463526 RFC5P40937 340 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 CYP4A11Q02928 519 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 SCRN1Q12765 414 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 EMC2Q15006 297 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 PPP4R3AQ6IN85 833 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 OTUD6AQ7L8S5 288 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 GPR149Q86SP6 731 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 POTEDQ86YR6 584 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 EXOC8Q8IYI6 725 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 TM6SF1Q9BZW5 370 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 IRF2BPLQ9H1B7 796 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 SFXN1Q9H9B4 322 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 MRPL17Q9NRX2 175 aaKnown RBP17.1■□□□□ 0.33
CMSS1-202ENST00000463526 KANSL3Q9P2N6 904 aa17.1■□□□□ 0.33
CMSS1-202ENST00000463526 CDKL5O76039 1030 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 ERLIN2O94905 339 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 ITGA4P13612 1032 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 GCFC2P16383 781 aaKnown RBP17.09■□□□□ 0.33
CMSS1-202ENST00000463526 XBP1P17861 261 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 OR1G1P47890 313 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 CLCN4P51793 760 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 AK2P54819 239 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 EARS2Q5JPH6 523 aaKnown RBP17.09■□□□□ 0.33
CMSS1-202ENST00000463526 CCDC149Q6ZUS6 474 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 TAS1R1Q7RTX1 841 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 FERMT3Q86UX7 667 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 TPH2Q8IWU9 490 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 C4orf19Q8IY42 314 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 FAM177A1Q8N128 213 aaPredicted RBP17.09■□□□□ 0.33
CMSS1-202ENST00000463526 SMG8Q8ND04 991 aaKnown RBP17.09■□□□□ 0.33
CMSS1-202ENST00000463526 FLCNQ8NFG4 579 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 TCP11Q8WWU5 503 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 ACSF2Q96CM8 615 aaPredicted RBP17.09■□□□□ 0.33
CMSS1-202ENST00000463526 CPB2Q96IY4 423 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 TMEM175Q9BSA9 504 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 APOL6Q9BWW8 343 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 EIF2AQ9BY44 585 aaKnown RBP17.09■□□□□ 0.33
CMSS1-202ENST00000463526 RNF39Q9H2S5 420 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 USTQ9Y2C2 406 aa17.09■□□□□ 0.33
CMSS1-202ENST00000463526 ZFHX2Q9C0A1 2572 aaPredicted RBP17.08■□□□□ 0.33
CMSS1-202ENST00000463526 CNTNAP2Q9UHC6 1331 aa17.08■□□□□ 0.32
CMSS1-202ENST00000463526 FAM205CA6NFA0 338 aa17.08■□□□□ 0.32
CMSS1-202ENST00000463526 NCLP19338 710 aaKnown RBP17.08■□□□□ 0.32
CMSS1-202ENST00000463526 ASTLQ6HA08 431 aaPredicted RBP17.08■□□□□ 0.32
CMSS1-202ENST00000463526 OTOP3Q7RTS5 596 aa17.08■□□□□ 0.32
CMSS1-202ENST00000463526 GAD1Q99259 594 aa17.08■□□□□ 0.32
CMSS1-202ENST00000463526 MTRQ99707 1265 aa17.08■□□□□ 0.32
CMSS1-202ENST00000463526 ZSWIM4Q9H7M6 989 aa17.08■□□□□ 0.32
CMSS1-202ENST00000463526 HES2Q9Y543 173 aa17.08■□□□□ 0.32
CMSS1-202ENST00000463526 PPME1Q9Y570 386 aa17.08■□□□□ 0.32
CMSS1-202ENST00000463526 IPPQ9Y573 584 aa17.08■□□□□ 0.32
CMSS1-202ENST00000463526 INO80B-WBP1J3KQ70 363 aa17.07■□□□□ 0.32
CMSS1-202ENST00000463526 ASAP2O43150 1006 aa17.07■□□□□ 0.32
CMSS1-202ENST00000463526 LILRB3O75022 631 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms