RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SMG8Q8ND04 991 aaKnown RBP19.54■□□□□ 0.72
VPS52-214ENST00000463486 SPIRE2Q8WWL2 714 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 LARP4BQ92615 738 aaKnown RBP19.54■□□□□ 0.72
VPS52-214ENST00000463486 IFT74Q96LB3 600 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 PRIMPOLQ96LW4 560 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 DRC1Q96MC2 740 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 REEP2Q9BRK0 252 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 EIF2AQ9BY44 585 aaKnown RBP19.54■□□□□ 0.72
VPS52-214ENST00000463486 C2orf40Q9H1Z8 148 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 C17orf75Q9HAS0 396 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 PRMT7Q9NVM4 692 aaPredicted RBP19.54■□□□□ 0.72
VPS52-214ENST00000463486 RNF216Q9NWF9 866 aaPredicted RBP19.54■□□□□ 0.72
VPS52-214ENST00000463486 HCSTQ9UBK5 93 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 STK17AQ9UEE5 414 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 CCDC39Q9UFE4 941 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 MTUS1Q9ULD2 1270 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 USP20Q9Y2K6 914 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 PCDHB2Q9Y5E7 798 aa19.54■□□□□ 0.72
VPS52-214ENST00000463486 CNTNAP2Q9UHC6 1331 aa19.53■□□□□ 0.72
VPS52-214ENST00000463486 ACKR2O00590 384 aa19.53■□□□□ 0.72
VPS52-214ENST00000463486 ERLIN2O94905 339 aa19.53■□□□□ 0.72
VPS52-214ENST00000463486 PLS3P13797 630 aa19.53■□□□□ 0.72
VPS52-214ENST00000463486 BMPR1AP36894 532 aa19.53■□□□□ 0.72
VPS52-214ENST00000463486 DHX8Q14562 1220 aaKnown RBP19.53■□□□□ 0.72
VPS52-214ENST00000463486 PAN2Q504Q3 1202 aaKnown RBP19.53■□□□□ 0.72
VPS52-214ENST00000463486 NT5DC1Q5TFE4 455 aa19.53■□□□□ 0.72
VPS52-214ENST00000463486 RRAGBQ5VZM2 374 aa19.53■□□□□ 0.72
VPS52-214ENST00000463486 ZBTB8OSQ8IWT0 167 aa19.53■□□□□ 0.72
VPS52-214ENST00000463486 TMEM192Q8IY95 271 aa19.53■□□□□ 0.72
VPS52-214ENST00000463486 DEPTORQ8TB45 409 aa19.53■□□□□ 0.72
VPS52-214ENST00000463486 LEO1Q8WVC0 666 aaPredicted RBP19.53■□□□□ 0.72
VPS52-214ENST00000463486 KCNN1Q92952 543 aa19.53■□□□□ 0.72
VPS52-214ENST00000463486 LPPQ93052 612 aa19.53■□□□□ 0.72
VPS52-214ENST00000463486 CCDC51Q96ER9 411 aa19.53■□□□□ 0.72
VPS52-214ENST00000463486 TMEM117Q9H0C3 514 aa19.53■□□□□ 0.72
VPS52-214ENST00000463486 TBKBP1A7MCY6 615 aa19.52■□□□□ 0.72
VPS52-214ENST00000463486 C5orf67F2Z3F1 127 aa19.52■□□□□ 0.72
VPS52-214ENST00000463486 RAB27AP51159 221 aa19.52■□□□□ 0.72
VPS52-214ENST00000463486 EFNA5P52803 228 aa19.52■□□□□ 0.72
VPS52-214ENST00000463486 NOTUMQ6P988 496 aa19.52■□□□□ 0.72
VPS52-214ENST00000463486 AGMOQ6ZNB7 445 aa19.52■□□□□ 0.72
VPS52-214ENST00000463486 CCDC73Q6ZRK6 1079 aa19.52■□□□□ 0.72
VPS52-214ENST00000463486 CDR2LQ86X02 465 aaPredicted RBP19.52■□□□□ 0.72
VPS52-214ENST00000463486 TMEM161BQ8NDZ6 487 aa19.52■□□□□ 0.72
VPS52-214ENST00000463486 SAMD11Q96NU1 681 aa19.52■□□□□ 0.72
VPS52-214ENST00000463486 FIZ1Q96SL8 496 aa19.52■□□□□ 0.72
VPS52-214ENST00000463486 RNF39Q9H2S5 420 aa19.52■□□□□ 0.72
VPS52-214ENST00000463486 CWH43Q9H720 699 aa19.52■□□□□ 0.72
VPS52-214ENST00000463486 ODF2LQ9ULJ1 636 aa19.52■□□□□ 0.72
VPS52-214ENST00000463486 PRRC2BQ5JSZ5 2229 aaKnown RBP19.52■□□□□ 0.71
VPS52-214ENST00000463486 MYMKA6NI61 221 aa19.51■□□□□ 0.71
VPS52-214ENST00000463486 CCDC169A6NNP5 214 aa19.51■□□□□ 0.71
VPS52-214ENST00000463486 OFD1O75665 1012 aa19.51■□□□□ 0.71
VPS52-214ENST00000463486 PRKCBP05771 671 aa19.51■□□□□ 0.71
VPS52-214ENST00000463486 SKIP12755 728 aa19.51■□□□□ 0.71
VPS52-214ENST00000463486 NCLP19338 710 aaKnown RBP19.51■□□□□ 0.71
VPS52-214ENST00000463486 AFF1P51825 1210 aaKnown RBP19.51■□□□□ 0.71
VPS52-214ENST00000463486 MAPK6Q16659 721 aa19.51■□□□□ 0.71
VPS52-214ENST00000463486 LONRF3Q496Y0 759 aa19.51■□□□□ 0.71
VPS52-214ENST00000463486 RESP18Q5W5W9 173 aa19.51■□□□□ 0.71
VPS52-214ENST00000463486 RNF169Q8NCN4 708 aa19.51■□□□□ 0.71
VPS52-214ENST00000463486 RASSF8Q8NHQ8 419 aa19.51■□□□□ 0.71
VPS52-214ENST00000463486 HELQQ8TDG4 1101 aa19.51■□□□□ 0.71
VPS52-214ENST00000463486 DNAJC19Q96DA6 116 aa19.51■□□□□ 0.71
VPS52-214ENST00000463486 PDZD7Q9H5P4 517 aa19.51■□□□□ 0.71
VPS52-214ENST00000463486 TMEM134Q9H6X4 195 aa19.51■□□□□ 0.71
VPS52-214ENST00000463486 TYW1Q9NV66 732 aaKnown RBP19.51■□□□□ 0.71
VPS52-214ENST00000463486 RBM19Q9Y4C8 960 aaKnown RBP19.51■□□□□ 0.71
VPS52-214ENST00000463486 H3BNC9 293 aa19.5■□□□□ 0.71
VPS52-214ENST00000463486 K7ERI5 159 aa19.5■□□□□ 0.71
VPS52-214ENST00000463486 SLC16A4O15374 487 aa19.5■□□□□ 0.71
VPS52-214ENST00000463486 HOXA2O43364 376 aa19.5■□□□□ 0.71
VPS52-214ENST00000463486 FOSL2P15408 326 aa19.5■□□□□ 0.71
VPS52-214ENST00000463486 TXLNAP40222 546 aa19.5■□□□□ 0.71
VPS52-214ENST00000463486 ME1P48163 572 aa19.5■□□□□ 0.71
VPS52-214ENST00000463486 DMP1Q13316 513 aaPredicted RBP19.5■□□□□ 0.71
VPS52-214ENST00000463486 EEF1DP3Q658K8 133 aa19.5■□□□□ 0.71
VPS52-214ENST00000463486 SLC27A1Q6PCB7 646 aa19.5■□□□□ 0.71
VPS52-214ENST00000463486 PDILTQ8N807 584 aa19.5■□□□□ 0.71
VPS52-214ENST00000463486 GDPD5Q8WTR4 605 aa19.5■□□□□ 0.71
VPS52-214ENST00000463486 PTPRHQ9HD43 1115 aa19.5■□□□□ 0.71
VPS52-214ENST00000463486 KMT5AQ9NQR1 393 aa19.5■□□□□ 0.71
VPS52-214ENST00000463486 IPPQ9Y573 584 aa19.5■□□□□ 0.71
VPS52-214ENST00000463486 MTCH2Q9Y6C9 303 aa19.5■□□□□ 0.71
VPS52-214ENST00000463486 KIAA1671Q9BY89 1806 aa19.49■□□□□ 0.71
VPS52-214ENST00000463486 INPPL1O15357 1258 aa19.49■□□□□ 0.71
VPS52-214ENST00000463486 RB1P06400 928 aa19.49■□□□□ 0.71
VPS52-214ENST00000463486 MAPTP10636 758 aaKnown RBP19.49■□□□□ 0.71
VPS52-214ENST00000463486 STAT6P42226 847 aa19.49■□□□□ 0.71
VPS52-214ENST00000463486 NCKAP1LP55160 1127 aa19.49■□□□□ 0.71
VPS52-214ENST00000463486 KRT85P78386 507 aa19.49■□□□□ 0.71
VPS52-214ENST00000463486 NUCB2P80303 420 aa19.49■□□□□ 0.71
VPS52-214ENST00000463486 NCBP1Q09161 790 aaKnown RBP19.49■□□□□ 0.71
VPS52-214ENST00000463486 PRPF4BQ13523 1007 aaKnown RBP19.49■□□□□ 0.71
VPS52-214ENST00000463486 FBXO22Q8NEZ5 403 aa19.49■□□□□ 0.71
VPS52-214ENST00000463486 HES2Q9Y543 173 aa19.49■□□□□ 0.71
VPS52-214ENST00000463486 RALGAPA2Q2PPJ7 1873 aa19.49■□□□□ 0.71
VPS52-214ENST00000463486 NLRC5Q86WI3 1866 aa19.49■□□□□ 0.71
VPS52-214ENST00000463486 ABLIM1O14639 778 aa19.48■□□□□ 0.71
VPS52-214ENST00000463486 SV2BQ7L1I2 683 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms