RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 KCNQ1P51787 676 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 PLCB3Q01970 1234 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 KRT17Q04695 432 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 RNASELQ05823 741 aaKnown RBP17.96■□□□□ 0.47
COL1A1-202ENST00000463440 ZRSR1Q15695 479 aaKnown RBP17.96■□□□□ 0.47
COL1A1-202ENST00000463440 CDCA2Q69YH5 1023 aaPredicted RBP17.96■□□□□ 0.47
COL1A1-202ENST00000463440 PPP4R3CPQ6ZMV5 832 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 AGMOQ6ZNB7 445 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 EP400NLQ6ZTU2 488 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 DEPTORQ8TB45 409 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 URGCPQ8TCY9 931 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 MICAL1Q8TDZ2 1067 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 PABPC5Q96DU9 382 aaKnown RBP17.96■□□□□ 0.47
COL1A1-202ENST00000463440 CDK5RAP3Q96JB5 506 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 PRIMPOLQ96LW4 560 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 AK8Q96MA6 479 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 TRIM6Q9C030 488 aaPredicted RBP17.96■□□□□ 0.47
COL1A1-202ENST00000463440 RSAD1Q9HA92 442 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 UBN1Q9NPG3 1134 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 TLR9Q9NR96 1032 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 FOXD4L1Q9NU39 408 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 LZTS1Q9Y250 596 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 BRWD1Q9NSI6 2320 aa17.95■□□□□ 0.46
COL1A1-202ENST00000463440 PLXNA4Q9HCM2 1894 aa17.95■□□□□ 0.46
COL1A1-202ENST00000463440 BMP1P13497 986 aa17.95■□□□□ 0.46
COL1A1-202ENST00000463440 ITGA4P13612 1032 aa17.95■□□□□ 0.46
COL1A1-202ENST00000463440 KCNA5P22460 613 aa17.95■□□□□ 0.46
COL1A1-202ENST00000463440 IRS1P35568 1242 aa17.95■□□□□ 0.46
COL1A1-202ENST00000463440 HYIQ5T013 277 aa17.95■□□□□ 0.46
COL1A1-202ENST00000463440 PDE12Q6L8Q7 609 aaKnown RBP17.95■□□□□ 0.46
COL1A1-202ENST00000463440 HACE1Q8IYU2 909 aa17.95■□□□□ 0.46
COL1A1-202ENST00000463440 ADAMTS19Q8TE59 1207 aa17.95■□□□□ 0.46
COL1A1-202ENST00000463440 BSNDQ8WZ55 320 aa17.95■□□□□ 0.46
COL1A1-202ENST00000463440 MRPS27Q92552 414 aaKnown RBP17.95■□□□□ 0.46
COL1A1-202ENST00000463440 EIF2AQ9BY44 585 aaKnown RBP17.95■□□□□ 0.46
COL1A1-202ENST00000463440 TBC1D13Q9NVG8 400 aa17.95■□□□□ 0.46
COL1A1-202ENST00000463440 KANSL3Q9P2N6 904 aa17.95■□□□□ 0.46
COL1A1-202ENST00000463440 IPPQ9Y573 584 aa17.95■□□□□ 0.46
COL1A1-202ENST00000463440 ATG2AQ2TAZ0 1938 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 B4GALT5O43286 388 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 SLC26A4O43511 780 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 ZC3H11AO75152 810 aaKnown RBP eCLIP17.94■□□□□ 0.46
COL1A1-202ENST00000463440 PBX3P40426 434 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 BCAR1P56945 870 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 HYAL1Q12794 435 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 COL19A1Q14993 1142 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 SF3A1Q15459 793 aaKnown RBP17.94■□□□□ 0.46
COL1A1-202ENST00000463440 MAPK6Q16659 721 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 FAM187BQ17R55 369 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 TMEM132AQ24JP5 1023 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 LEXMQ3ZCV2 418 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 SLC27A1Q6PCB7 646 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 HSCBQ8IWL3 235 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 SLC39A11Q8N1S5 342 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 SMG8Q8ND04 991 aaKnown RBP17.94■□□□□ 0.46
COL1A1-202ENST00000463440 FZD8Q9H461 694 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 IGFLR1Q9H665 355 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 CLDND1Q9NY35 253 aa17.94■□□□□ 0.46
COL1A1-202ENST00000463440 CUL9Q8IWT3 2517 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 A0A1B0GUA9 196 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 PRKCBP05771 671 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 LONP1P36776 959 aaKnown RBP17.93■□□□□ 0.46
COL1A1-202ENST00000463440 UBA7P41226 1012 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 EFNA5P52803 228 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 RESTQ13127 1097 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 RINT1Q6NUQ1 792 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 KCNK18Q7Z418 384 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 CABP7Q86V35 215 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 CALML4Q96GE6 196 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 DRC1Q96MC2 740 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 PNMA5Q96PV4 448 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 FAM193BQ96PV7 902 aaPredicted RBP17.93■□□□□ 0.46
COL1A1-202ENST00000463440 TIPINQ9BVW5 301 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 GBP3Q9H0R5 595 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 NRDE2Q9H7Z3 1164 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 POLD4Q9HCU8 107 aa17.93■□□□□ 0.46
COL1A1-202ENST00000463440 HIP1RO75146 1068 aa17.92■□□□□ 0.46
COL1A1-202ENST00000463440 NPTXRO95502 500 aa17.92■□□□□ 0.46
COL1A1-202ENST00000463440 SSBP05455 408 aaKnown RBP eCLIP17.92■□□□□ 0.46
COL1A1-202ENST00000463440 LIG1P18858 919 aa17.92■□□□□ 0.46
COL1A1-202ENST00000463440 ERVFC1P60507 584 aa17.92■□□□□ 0.46
COL1A1-202ENST00000463440 PRPF4BQ13523 1007 aaKnown RBP17.92■□□□□ 0.46
COL1A1-202ENST00000463440 CTC1Q2NKJ3 1217 aa17.92■□□□□ 0.46
COL1A1-202ENST00000463440 PUS10Q3MIT2 529 aaKnown RBP17.92■□□□□ 0.46
COL1A1-202ENST00000463440 C1orf186Q6ZWK4 172 aa17.92■□□□□ 0.46
COL1A1-202ENST00000463440 ADGRD2Q7Z7M1 963 aa17.92■□□□□ 0.46
COL1A1-202ENST00000463440 TMEM169Q96HH4 297 aa17.92■□□□□ 0.46
COL1A1-202ENST00000463440 UHRF1Q96T88 793 aaPredicted RBP17.92■□□□□ 0.46
COL1A1-202ENST00000463440 PLIN2Q99541 437 aa17.92■□□□□ 0.46
COL1A1-202ENST00000463440 RUSC1Q9BVN2 902 aa17.92■□□□□ 0.46
COL1A1-202ENST00000463440 APOL6Q9BWW8 343 aa17.92■□□□□ 0.46
COL1A1-202ENST00000463440 TLE6Q9H808 572 aa17.92■□□□□ 0.46
COL1A1-202ENST00000463440 NGRNQ9NPE2 291 aaKnown RBP17.92■□□□□ 0.46
COL1A1-202ENST00000463440 ENTPD7Q9NQZ7 604 aa17.92■□□□□ 0.46
COL1A1-202ENST00000463440 MTMR6Q9Y217 621 aa17.92■□□□□ 0.46
COL1A1-202ENST00000463440 FSD2A1L4K1 749 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 CCDC169A6NNP5 214 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 NT5C1B-RDH14C9J2C7 533 aa17.91■□□□□ 0.46
COL1A1-202ENST00000463440 H3BQ06 376 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-202ENST00000463440 ACKR2O00590 384 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms