RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 PTPN1P18031 435 aaKnown RBP3.62□□□□□ -1.83
SMC4-203ENST00000462668 MAN2A1Q16706 1144 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 CLEC4DQ8WXI8 215 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 ASB12Q8WXK4 309 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 KMT5AQ9NQR1 393 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 ITM2CQ9NQX7 267 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 CDC23Q9UJX2 597 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 TCFL5Q9UL49 500 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 NT5C1B-RDH14C9J2C7 533 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 OPHN1O60890 802 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 OSMP13725 252 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 ADD2P35612 726 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 TECP42680 631 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 CDK7P50613 346 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 RAC1P63000 192 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 VAMP2P63027 116 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 ATP8B2P98198 1209 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 MEF2AQ02078 507 aaPredicted RBP3.62□□□□□ -1.83
SMC4-203ENST00000462668 SEPT2Q15019 361 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 POSTNQ15063 836 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 PLA2G4EQ3MJ16 856 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 LIN54Q6MZP7 749 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 C12orf50Q8NA57 414 aaPredicted RBP3.62□□□□□ -1.83
SMC4-203ENST00000462668 OR14C36Q8NHC7 312 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 P2RX7Q99572 595 aaKnown RBP3.62□□□□□ -1.83
SMC4-203ENST00000462668 EIF2AQ9BY44 585 aaKnown RBP3.62□□□□□ -1.83
SMC4-203ENST00000462668 AKTIPQ9H8T0 292 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.62□□□□□ -1.83
SMC4-203ENST00000462668 RRN3Q9NYV6 651 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 ARHGAP28Q9P2N2 729 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 TPX2Q9ULW0 747 aaKnown RBP3.62□□□□□ -1.83
SMC4-203ENST00000462668 MYPNQ86TC9 1320 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 GNAT1P11488 350 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 CCR5P51681 352 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 CLCN7P51798 805 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 PFKFB4Q16877 469 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 CPZQ66K79 652 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 FAM180BQ6P0A1 224 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 RIN2Q8WYP3 895 aaPredicted RBP3.62□□□□□ -1.83
SMC4-203ENST00000462668 YIPF2Q9BWQ6 316 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 BRIP1Q9BX63 1249 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 ACE2Q9BYF1 805 aaPredicted RBP3.62□□□□□ -1.83
SMC4-203ENST00000462668 TRIM54Q9BYV2 358 aa3.62□□□□□ -1.83
SMC4-203ENST00000462668 OR2W5A6NFC9 320 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 HIP1RO75146 1068 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 PRPF6O94906 941 aaKnown RBP3.61□□□□□ -1.83
SMC4-203ENST00000462668 STT3AP46977 705 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 LGALS4P56470 323 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 DCAF7P61962 342 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 TLE2Q04725 743 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 FASTKD5Q7L8L6 764 aaKnown RBP3.61□□□□□ -1.83
SMC4-203ENST00000462668 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.61□□□□□ -1.83
SMC4-203ENST00000462668 ZAR1Q86SH2 424 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 TTC7BQ86TV6 843 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 CPNE8Q86YQ8 564 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 VGLL2Q8N8G2 317 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.61□□□□□ -1.83
SMC4-203ENST00000462668 RFFLQ8WZ73 363 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 MAML1Q92585 1016 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 RGMAQ96B86 450 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 SUCLG2Q96I99 432 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 AGXT2Q9BYV1 514 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 EBF1Q9UH73 591 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 PASKQ96RG2 1323 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 HNRNPDLO14979 420 aaKnown RBP3.61□□□□□ -1.83
SMC4-203ENST00000462668 FPR2P25090 351 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 PNLIPRP1P54315 467 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 BCAR1P56945 870 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 PLS1Q14651 629 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 UAP1L1Q3KQV9 507 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 CCDC38Q502W7 563 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 VPS53Q5VIR6 699 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 JMJD6Q6NYC1 403 aaPredicted RBP3.61□□□□□ -1.83
SMC4-203ENST00000462668 PGBD2Q6P3X8 592 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 UNQ6494/PRO21346Q6UXR6 183 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 MICU3Q86XE3 530 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 AGGF1Q8N302 714 aaeCLIP3.61□□□□□ -1.83
SMC4-203ENST00000462668 GIMAP7Q8NHV1 300 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 CDK5RAP3Q96JB5 506 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 PRDM13Q9H4Q3 707 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 RIC8AQ9NPQ8 531 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 NKIRAS2Q9NYR9 191 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 KCNG1Q9UIX4 513 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 SIK3Q9Y2K2 1263 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 SNX11Q9Y5W9 270 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 UBA6A0AVT1 1052 aaPredicted RBP3.61□□□□□ -1.83
SMC4-203ENST00000462668 KPNA5O15131 536 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 CLEC2LP0C7M8 214 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 FAM87AP0C7U9 286 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 FGFR2P21802 821 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 ADMP35318 185 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 TLE1Q04724 770 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 LMBR1LQ6UX01 489 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 FAM71BQ8TC56 605 aa3.61□□□□□ -1.83
SMC4-203ENST00000462668 OTUD7AQ8TE49 926 aaPredicted RBP3.61□□□□□ -1.83
SMC4-203ENST00000462668 PAWRQ96IZ0 340 aaKnown RBP3.61□□□□□ -1.83
SMC4-203ENST00000462668 FDXACB1Q9BRP7 624 aaPredicted RBP3.61□□□□□ -1.83
SMC4-203ENST00000462668 PITPNM2Q9BZ72 1349 aa3.6□□□□□ -1.83
SMC4-203ENST00000462668 A0A1W2PQ45 241 aaPredicted RBP3.6□□□□□ -1.83
SMC4-203ENST00000462668 A0A1W2PQY0 241 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms