RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 BCAR1P56945 870 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 KRT17Q04695 432 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 ITIH3Q06033 890 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 MTMR3Q13615 1198 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 NONOQ15233 471 aaKnown RBP eCLIP8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 TPRNQ4KMQ1 711 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 LRCH2Q5VUJ6 765 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 KIAA1841Q6NSI8 718 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 KANK3Q6NY19 840 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 KRT25Q7Z3Z0 450 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 ZNF710Q8N1W2 664 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 C12orf76Q8N812 135 aaPredicted RBP8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 TMEM105Q8N8V8 129 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 NLRP7Q8WX94 980 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 WASF1Q92558 559 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 LPPQ93052 612 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 NECTIN4Q96NY8 510 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 HS3ST6Q96QI5 342 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 RIT2Q99578 217 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 SH2D3AQ9BRG2 576 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 LLPHQ9BRT6 129 aaKnown RBP8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 TRAIPQ9BWF2 469 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 MRPL9Q9BYD2 267 aaKnown RBP8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 TCEAL9Q9UHQ7 104 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 SORCS3Q9UPU3 1222 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 NR2E1Q9Y466 385 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 SAMM50Q9Y512 469 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 IRAK3Q9Y616 596 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 TRIP11Q15643 1979 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 VWA8A3KMH1 1905 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 MIA3Q5JRA6 1907 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 CACNA1IQ9P0X4 2223 aa8.89□□□□□ -0.99
CDC42BPA-210ENST00000462553 A0A087WZ62 844 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 GFRA3O60609 400 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 GAS7O60861 476 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 ZC3H11AO75152 810 aaKnown RBP eCLIP8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 ASGR2P07307 311 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 CTSAP10619 480 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 XBP1P17861 261 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 SFNP31947 248 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 MTHFRP42898 656 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 JAK3P52333 1124 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 GUCY1B3Q02153 619 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 TBC1D8BQ0IIM8 1120 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 MTERF2Q49AM1 385 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 RARS2Q5T160 578 aaKnown RBP8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 PIK3AP1Q6ZUJ8 805 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 DIS3L2Q8IYB7 885 aaKnown RBP8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 UBALD2Q8IYN6 164 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 VPS52Q8N1B4 723 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 PDCD7Q8N8D1 485 aaKnown RBP8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 SLC22A17Q8WUG5 538 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 IGSF21Q96ID5 467 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 TMX3Q96JJ7 454 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 SNX27Q96L92 541 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 FDXACB1Q9BRP7 624 aaPredicted RBP8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 TEKT3Q9BXF9 490 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 NIFKQ9BYG3 293 aaKnown RBP8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 NRDE2Q9H7Z3 1164 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 UPF2Q9HAU5 1272 aaKnown RBP8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 KCNMB3Q9NPA1 279 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 NRBP2Q9NSY0 501 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 TBC1D13Q9NVG8 400 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 DACT1Q9NYF0 836 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 DNAJB4Q9UDY4 337 aa8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 SEPT9Q9UHD8 586 aaPredicted RBP8.88□□□□□ -0.99
CDC42BPA-210ENST00000462553 CCDC194A0A1B0GVG4 234 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 BTBD18B2RXH4 712 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 PROB1E7EW31 1015 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 H0Y858 1186 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 GALTP07902 379 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 SLC11A1P49279 550 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 AFF1P51825 1210 aaKnown RBP8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 POLGP54098 1239 aaPredicted RBP8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 HMGN5P82970 282 aaKnown RBP8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 PTPN14Q15678 1187 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 LETM2Q2VYF4 491 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 LONRF3Q496Y0 759 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 CWF19L1Q69YN2 538 aaKnown RBP8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 PPP4R3AQ6IN85 833 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 CES5AQ6NT32 575 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 ANO5Q75V66 913 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 MIER3Q7Z3K6 550 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 NEK8Q86SG6 692 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 ZBTB33Q86T24 672 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 DDX53Q86TM3 631 aaKnown RBP8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 KSR1Q8IVT5 923 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 ZDHHC14Q8IZN3 488 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 RDM1Q8NG50 284 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 ATOH1Q92858 354 aaPredicted RBP8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 TMEM169Q96HH4 297 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 SCLT1Q96NL6 688 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 CHST12Q9NRB3 414 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 FAM105AQ9NUU6 356 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 DZANK1Q9NVP4 752 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 DDX25Q9UHL0 483 aaKnown RBP8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 VAV3Q9UKW4 847 aa8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 PIN4Q9Y237 131 aaKnown RBP8.87□□□□□ -0.99
CDC42BPA-210ENST00000462553 GPR179Q6PRD1 2367 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms