RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 LRRC55Q6ZSA7 311 aa20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 KCTD17Q8N5Z5 321 aa20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 FOXD4L4Q8WXT5 416 aaPredicted RBP20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 DRC1Q96MC2 740 aa20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 ZNF558Q96NG5 402 aa20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 EIF2AQ9BY44 585 aaKnown RBP20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 CSRNP2Q9H175 543 aa20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 REV3LO60673 3130 aa20.47■□□□□ 0.87
CDKN1A-206ENST00000462537 SLC26A4O43511 780 aa20.46■□□□□ 0.87
CDKN1A-206ENST00000462537 FGF18O76093 207 aa20.46■□□□□ 0.87
CDKN1A-206ENST00000462537 RAD51AP2Q09MP3 1159 aa20.46■□□□□ 0.87
CDKN1A-206ENST00000462537 MAPK6Q16659 721 aa20.46■□□□□ 0.87
CDKN1A-206ENST00000462537 CDR2LQ86X02 465 aaPredicted RBP20.46■□□□□ 0.87
CDKN1A-206ENST00000462537 CNNM3Q8NE01 707 aa20.46■□□□□ 0.87
CDKN1A-206ENST00000462537 URGCPQ8TCY9 931 aa20.46■□□□□ 0.87
CDKN1A-206ENST00000462537 PRIMPOLQ96LW4 560 aa20.46■□□□□ 0.87
CDKN1A-206ENST00000462537 KIFC3Q9BVG8 833 aa20.46■□□□□ 0.87
CDKN1A-206ENST00000462537 APOL6Q9BWW8 343 aa20.46■□□□□ 0.87
CDKN1A-206ENST00000462537 NSUN3Q9H649 340 aaKnown RBP20.46■□□□□ 0.87
CDKN1A-206ENST00000462537 RSAD1Q9HA92 442 aa20.46■□□□□ 0.87
CDKN1A-206ENST00000462537 IPPQ9Y573 584 aa20.46■□□□□ 0.87
CDKN1A-206ENST00000462537 CNTNAP2Q9UHC6 1331 aa20.46■□□□□ 0.87
CDKN1A-206ENST00000462537 UNC80Q8N2C7 3258 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 CCDC169A6NNP5 214 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 NPTXRO95502 500 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 PRKCBP05771 671 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 PLA2G4BP0C869 781 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 ITGA4P13612 1032 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 NCLP19338 710 aaKnown RBP20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 PBX3P40426 434 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 PEX3P56589 373 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 RNASELQ05823 741 aaKnown RBP20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 PRPF4BQ13523 1007 aaKnown RBP20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 KARSQ15046 597 aaKnown RBP20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 NOMO2Q5JPE7 1267 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 SLC27A1Q6PCB7 646 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 KCNT2Q6UVM3 1135 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 PPP4R3CPQ6ZMV5 832 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 AGMOQ6ZNB7 445 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 C1orf186Q6ZWK4 172 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 MRPL10Q7Z7H8 261 aaKnown RBP20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 SYT2Q8N9I0 419 aaPredicted RBP20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 SPPL3Q8TCT6 385 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 POF1BQ8WVV4 589 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 RSPH1Q8WYR4 309 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 HLA-CQ95604 372 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 USP28Q96RU2 1077 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 GBP3Q9H0R5 595 aa20.45■□□□□ 0.86
CDKN1A-206ENST00000462537 ZC3H11AO75152 810 aaKnown RBP eCLIP20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 OFD1O75665 1012 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 PDIA4P13667 645 aaKnown RBP20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 DNAJB1P25685 340 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 EFNA5P52803 228 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 SLC12A3P55017 1021 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 MRPS5P82675 430 aaKnown RBP20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 DMP1Q13316 513 aaPredicted RBP20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 DHX8Q14562 1220 aaKnown RBP20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 FAM187BQ17R55 369 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 TCEAL5Q5H9L2 206 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 SPECC1Q5M775 1068 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 HACE1Q8IYU2 909 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 DAW1Q8N136 415 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 SMG8Q8ND04 991 aaKnown RBP20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 ATXN2LQ8WWM7 1075 aaKnown RBP20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 TIPINQ9BVW5 301 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 FZD8Q9H461 694 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 UBN1Q9NPG3 1134 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 TBC1D13Q9NVG8 400 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 FBXO2Q9UK22 296 aaPredicted RBP20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 COG5Q9UP83 839 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 HES2Q9Y543 173 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 SRPRBQ9Y5M8 271 aaKnown RBP20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 MYH11P35749 1972 aa20.44■□□□□ 0.86
CDKN1A-206ENST00000462537 A0A1B0GUA9 196 aa20.43■□□□□ 0.86
CDKN1A-206ENST00000462537 PLCG1P19174 1290 aa20.43■□□□□ 0.86
CDKN1A-206ENST00000462537 GUCY2CP25092 1073 aa20.43■□□□□ 0.86
CDKN1A-206ENST00000462537 PPM1AP35813 382 aa20.43■□□□□ 0.86
CDKN1A-206ENST00000462537 TFF2Q03403 129 aa20.43■□□□□ 0.86
CDKN1A-206ENST00000462537 STK38Q15208 465 aa20.43■□□□□ 0.86
CDKN1A-206ENST00000462537 EPSTI1Q96J88 318 aa20.43■□□□□ 0.86
CDKN1A-206ENST00000462537 ZNF396Q96N95 335 aaPredicted RBP20.43■□□□□ 0.86
CDKN1A-206ENST00000462537 CLIC6Q96NY7 704 aa20.43■□□□□ 0.86
CDKN1A-206ENST00000462537 CCDC113Q9H0I3 377 aa20.43■□□□□ 0.86
CDKN1A-206ENST00000462537 NXF3Q9H4D5 531 aaKnown RBP20.43■□□□□ 0.86
CDKN1A-206ENST00000462537 KMT5AQ9NQR1 393 aa20.43■□□□□ 0.86
CDKN1A-206ENST00000462537 SPG21Q9NZD8 308 aa20.43■□□□□ 0.86
CDKN1A-206ENST00000462537 SFI1A8K8P3 1242 aa20.42■□□□□ 0.86
CDKN1A-206ENST00000462537 ACKR2O00590 384 aa20.42■□□□□ 0.86
CDKN1A-206ENST00000462537 N4BP3O15049 544 aa20.42■□□□□ 0.86
CDKN1A-206ENST00000462537 ZSCAN22P10073 491 aaPredicted RBP20.42■□□□□ 0.86
CDKN1A-206ENST00000462537 TXLNAP40222 546 aa20.42■□□□□ 0.86
CDKN1A-206ENST00000462537 NPTX2P47972 431 aa20.42■□□□□ 0.86
CDKN1A-206ENST00000462537 ALDH7A1P49419 539 aaKnown RBP20.42■□□□□ 0.86
CDKN1A-206ENST00000462537 UBE3AQ05086 875 aa20.42■□□□□ 0.86
CDKN1A-206ENST00000462537 MAPK7Q13164 816 aa20.42■□□□□ 0.86
CDKN1A-206ENST00000462537 CAMK1Q14012 370 aa20.42■□□□□ 0.86
CDKN1A-206ENST00000462537 SLC39A14Q15043 492 aa20.42■□□□□ 0.86
CDKN1A-206ENST00000462537 FOXD4L6Q3SYB3 417 aaPredicted RBP20.42■□□□□ 0.86
CDKN1A-206ENST00000462537 FOXD4L3Q6VB84 417 aaPredicted RBP20.42■□□□□ 0.86
CDKN1A-206ENST00000462537 EP400NLQ6ZTU2 488 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms