RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 NAMPTP43490 491 aa20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 ALDH7A1P49419 539 aaKnown RBP20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 KCNQ1P51787 676 aa20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 PLCB3Q01970 1234 aa20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 RNASELQ05823 741 aaKnown RBP20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 CDCA2Q69YH5 1023 aaPredicted RBP20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 AGMOQ6ZNB7 445 aa20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 KCTD17Q8N5Z5 321 aa20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 DEPTORQ8TB45 409 aa20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 PRIMPOLQ96LW4 560 aa20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 AK8Q96MA6 479 aa20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 PLIN2Q99541 437 aa20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 TRIM6Q9C030 488 aaPredicted RBP20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 IPPQ9Y573 584 aa20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 KIAA1671Q9BY89 1806 aa20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 CNTNAP2Q9UHC6 1331 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 ITGA4P13612 1032 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 LIG1P18858 919 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 KCNA5P22460 613 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 KRT17Q04695 432 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 TMEM132AQ24JP5 1023 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 HYIQ5T013 277 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 PPP4R3CPQ6ZMV5 832 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 KCNK18Q7Z418 384 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 SMG8Q8ND04 991 aaKnown RBP20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 URGCPQ8TCY9 931 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 MRPS27Q92552 414 aaKnown RBP20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 PNMA5Q96PV4 448 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 IGFLR1Q9H665 355 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 UBN1Q9NPG3 1134 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 TLR9Q9NR96 1032 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 TBC1D13Q9NVG8 400 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 CLDND1Q9NY35 253 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 SPG21Q9NZD8 308 aa20.88■□□□□ 0.93
SLC6A1-204ENST00000462473 EYSQ5T1H1 3165 aa20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 A0A1B0GUA9 196 aa20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 STX6O43752 255 aa20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 ZC3H11AO75152 810 aaKnown RBP eCLIP20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 SSBP05455 408 aaKnown RBP eCLIP20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 UBA7P41226 1012 aa20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 BCAR1P56945 870 aa20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 RESTQ13127 1097 aa20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 MAPK6Q16659 721 aa20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 RINT1Q6NUQ1 792 aa20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 SLC27A1Q6PCB7 646 aa20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 CABP7Q86V35 215 aa20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 CDR2LQ86X02 465 aaPredicted RBP20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 PABPC5Q96DU9 382 aaKnown RBP20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 GBP3Q9H0R5 595 aa20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 FZD8Q9H461 694 aa20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 KANSL3Q9P2N6 904 aa20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 MTMR6Q9Y217 621 aa20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 LZTS1Q9Y250 596 aa20.87■□□□□ 0.93
SLC6A1-204ENST00000462473 NT5C1B-RDH14C9J2C7 533 aa20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 NPTXRO95502 500 aa20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 HSP90AA1P07900 732 aaKnown RBP20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 BMP1P13497 986 aa20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 LONP1P36776 959 aaKnown RBP20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 HYAL1Q12794 435 aa20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 FAM187BQ17R55 369 aa20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 C1orf186Q6ZWK4 172 aa20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 HACE1Q8IYU2 909 aa20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 SLC39A11Q8N1S5 342 aa20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 ADAMTS19Q8TE59 1207 aa20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 CALML4Q96GE6 196 aa20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 FAM193BQ96PV7 902 aaPredicted RBP20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 RUSC1Q9BVN2 902 aa20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 APOL6Q9BWW8 343 aa20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 NRDE2Q9H7Z3 1164 aa20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 HES2Q9Y543 173 aa20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 CLIC4Q9Y696 253 aa20.86■□□□□ 0.93
SLC6A1-204ENST00000462473 CARNS1A5YM72 827 aa20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 CCDC169A6NNP5 214 aa20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 SLC26A4O43511 780 aa20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 HIP1RO75146 1068 aa20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 PRKCBP05771 671 aa20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 GTF2F1P35269 517 aaKnown RBP eCLIP20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 ERVFC1P60507 584 aa20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 PRPF4BQ13523 1007 aaKnown RBP20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 PDE12Q6L8Q7 609 aaKnown RBP20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 FAM173BQ6P4H8 233 aa20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 ADGRD2Q7Z7M1 963 aa20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 RBM23Q86U06 439 aaKnown RBP20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 SYT2Q8N9I0 419 aaPredicted RBP20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 RASSF8Q8NHQ8 419 aa20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 DRC1Q96MC2 740 aa20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 KIFC3Q9BVG8 833 aa20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 RNF39Q9H2S5 420 aa20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 ZSCAN16Q9H4T2 348 aaPredicted RBP20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 PCDHGC5Q9Y5F6 944 aa20.85■□□□□ 0.93
SLC6A1-204ENST00000462473 MYO7AQ13402 2215 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 H3BQ06 376 aaPredicted RBP20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 ACKR2O00590 384 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 N4BP3O15049 544 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 POMCP01189 267 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 PLA2G4BP0C869 781 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 NRIP1P48552 1158 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 EFNA5P52803 228 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 PEX3P56589 373 aa20.84■□□□□ 0.93
SLC6A1-204ENST00000462473 CEBPZQ03701 1054 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms