RNA–Protein interactions for RNA: ENST00000462429.1

VPS41-210, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 3

Gene VPS41, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-210ENST00000462429 DNM3Q9UQ16 869 aa5.48□□□□□ -1.53
VPS41-210ENST00000462429 RPTORQ8N122 1335 aa5.48□□□□□ -1.53
VPS41-210ENST00000462429 C2orf78A6NCI8 922 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 MTSS1O43312 755 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 TSPAN6O43657 245 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 B4GALT3O60512 393 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 PHF2O75151 1096 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 ALDH1A2O94788 518 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 SCGB1D2O95969 90 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 U2AF1L5P0DN76 240 aaPredicted RBP5.47□□□□□ -1.53
VPS41-210ENST00000462429 BMP7P18075 431 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 CTSSP25774 331 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 MCAMP43121 646 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 KIR2DL3P43628 341 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 WNT3AP56704 352 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 RAC3P60763 192 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 U2AF1Q01081 240 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS41-210ENST00000462429 KIF23Q02241 960 aaPredicted RBP5.47□□□□□ -1.53
VPS41-210ENST00000462429 C19orf54Q5BKX5 351 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 KRT40Q6A162 431 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 ARHGEF18Q6ZSZ5 1173 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 FMNL3Q8IVF7 1028 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 OR14K1Q8NGZ2 314 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 CHPF2Q9P2E5 772 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 PUF60Q9UHX1 559 aaKnown RBP5.47□□□□□ -1.53
VPS41-210ENST00000462429 SCOCQ9UIL1 159 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 TUBD1Q9UJT1 453 aa5.47□□□□□ -1.53
VPS41-210ENST00000462429 FAM171A2A8MVW0 826 aa5.46□□□□□ -1.54
VPS41-210ENST00000462429 TMEM127O75204 238 aa5.46□□□□□ -1.54
VPS41-210ENST00000462429 ZRANB2O95218 330 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS41-210ENST00000462429 JUNP05412 331 aaKnown RBP5.46□□□□□ -1.54
VPS41-210ENST00000462429 VSIG10L2P0DP72 767 aa5.46□□□□□ -1.54
VPS41-210ENST00000462429 GSPT1P15170 499 aaKnown RBP5.46□□□□□ -1.54
VPS41-210ENST00000462429 BPIFB4P59827 614 aa5.46□□□□□ -1.54
VPS41-210ENST00000462429 PPP2CBP62714 309 aa5.46□□□□□ -1.54
VPS41-210ENST00000462429 PPP2CAP67775 309 aa5.46□□□□□ -1.54
VPS41-210ENST00000462429 ATP2C1P98194 919 aaPredicted RBP5.46□□□□□ -1.54
VPS41-210ENST00000462429 UBE3CQ15386 1083 aa5.46□□□□□ -1.54
VPS41-210ENST00000462429 TBR1Q16650 682 aa5.46□□□□□ -1.54
VPS41-210ENST00000462429 RNF151Q2KHN1 245 aa5.46□□□□□ -1.54
VPS41-210ENST00000462429 UAP1L1Q3KQV9 507 aa5.46□□□□□ -1.54
VPS41-210ENST00000462429 GAGE13Q4V321 117 aa5.46□□□□□ -1.54
VPS41-210ENST00000462429 ANKRD53Q8N9V6 530 aa5.46□□□□□ -1.54
VPS41-210ENST00000462429 SYT8Q8NBV8 401 aa5.46□□□□□ -1.54
VPS41-210ENST00000462429 SNX33Q8WV41 574 aa5.46□□□□□ -1.54
VPS41-210ENST00000462429 RIN2Q8WYP3 895 aaPredicted RBP5.46□□□□□ -1.54
VPS41-210ENST00000462429 MSL2Q9HCI7 577 aa5.46□□□□□ -1.54
VPS41-210ENST00000462429 PMS2P1A4D2B8 440 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 NRP1O14786 923 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 AKR1B10O60218 316 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 TOX4O94842 621 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 AKAP5P24588 427 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 CYP2C19P33261 490 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 WASP42768 502 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 ADCY7P51828 1080 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 HGFACQ04756 655 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 MGAT2Q10469 447 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 NOMO1Q15155 1222 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 LRRC41Q15345 812 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 FAM102BQ5T8I3 360 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 CXorf57Q6NSI4 855 aaKnown RBP5.45□□□□□ -1.54
VPS41-210ENST00000462429 ABHD15Q6UXT9 468 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 LCNL1Q6ZST4 164 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 NOL8Q76FK4 1167 aaKnown RBP5.45□□□□□ -1.54
VPS41-210ENST00000462429 FEZF2Q8TBJ5 459 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 ZNF480Q8WV37 535 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 NRG4Q8WWG1 115 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 HDAC10Q969S8 669 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 COA7Q96BR5 231 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 KCNC2Q96PR1 638 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 ZCCHC4Q9H5U6 513 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 SEC61A2Q9H9S3 476 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 DMRT3Q9NQL9 472 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 TLR9Q9NR96 1032 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 ING3Q9NXR8 418 aa5.45□□□□□ -1.54
VPS41-210ENST00000462429 SLC26A4O43511 780 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 DTNBO60941 627 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 ENDOD1O94919 500 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 CNOT4O95628 575 aaKnown RBP5.44□□□□□ -1.54
VPS41-210ENST00000462429 GYPEP15421 78 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 ECHS1P30084 290 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 ADSLP30566 484 aaPredicted RBP5.44□□□□□ -1.54
VPS41-210ENST00000462429 EPHB4P54760 987 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 DUSP2Q05923 314 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 PPP3CAQ08209 521 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 GTF2H3Q13889 308 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 RRP12Q5JTH9 1297 aaKnown RBP5.44□□□□□ -1.54
VPS41-210ENST00000462429 NXNQ6DKJ4 435 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 MIGA2Q7L4E1 593 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 WDR75Q8IWA0 830 aaKnown RBP5.44□□□□□ -1.54
VPS41-210ENST00000462429 TCEAL8Q8IYN2 117 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 MYO1HQ8N1T3 1032 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 MSL3Q8N5Y2 521 aaKnown RBP5.44□□□□□ -1.54
VPS41-210ENST00000462429 RABGGTAQ92696 567 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 NEIL1Q96FI4 390 aaPredicted RBP5.44□□□□□ -1.54
VPS41-210ENST00000462429 RPL10LQ96L21 214 aaKnown RBP5.44□□□□□ -1.54
VPS41-210ENST00000462429 LMF1Q96S06 567 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 C7orf25Q9BPX7 421 aa5.44□□□□□ -1.54
VPS41-210ENST00000462429 C12orf65Q9H3J6 166 aaKnown RBP5.44□□□□□ -1.54
VPS41-210ENST00000462429 INTUQ9ULD6 942 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms