RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 MORC2Q9Y6X9 1032 aaPredicted RBP10.55□□□□□ -0.72
PKP4-208ENST00000462335 ARID2Q68CP9 1835 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 MYO9BQ13459 2157 aa10.55□□□□□ -0.72
PKP4-208ENST00000462335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.54□□□□□ -0.72
PKP4-208ENST00000462335 NPHP3-ACAD11A0A0J9YXS1 232 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 C9IYK1 514 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 SLC16A4O15374 487 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 POLR2DO15514 142 aaKnown RBP10.54□□□□□ -0.72
PKP4-208ENST00000462335 MGEA5O60502 916 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 NR1I2O75469 434 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 DGKIO75912 1065 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 PLS3P13797 630 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 SCP2P22307 547 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 CTNNB1P35222 781 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 NPTX2P47972 431 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 MBTD1Q05BQ5 628 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 PTPROQ16827 1216 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 SLC27A1Q6PCB7 646 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 STXBP4Q6ZWJ1 553 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 USP49Q70CQ1 688 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 KCNK18Q7Z418 384 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 FAM178BQ8IXR5 827 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 CCDC65Q8IXS2 484 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 CMTR2Q8IYT2 770 aaKnown RBP10.54□□□□□ -0.72
PKP4-208ENST00000462335 MICALL1Q8N3F8 863 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 TMEM87AQ8NBN3 555 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 CCDC47Q96A33 483 aaKnown RBP10.54□□□□□ -0.72
PKP4-208ENST00000462335 MRPL9Q9BYD2 267 aaKnown RBP10.54□□□□□ -0.72
PKP4-208ENST00000462335 MRPL4Q9BYD3 311 aaKnown RBP10.54□□□□□ -0.72
PKP4-208ENST00000462335 PRDM12Q9H4Q4 367 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 MINDY3Q9H8M7 445 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 PARP2Q9UGN5 583 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 PCDHA7Q9UN72 937 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 ADGRA3Q8IWK6 1321 aa10.54□□□□□ -0.72
PKP4-208ENST00000462335 LCHNA4D1U4 455 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 LINC01553A4QN01 128 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 ACKR2O00590 384 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 TSPAN1O60635 241 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 LPXNO60711 386 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 NPTXRO95502 500 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 FGFR1P11362 822 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 GAP43P17677 238 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 ALDH7A1P49419 539 aaKnown RBP10.53□□□□□ -0.72
PKP4-208ENST00000462335 FAM189BP81408 668 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 HTRA4P83105 476 aaPredicted RBP10.53□□□□□ -0.72
PKP4-208ENST00000462335 CACNB1Q02641 598 aaPredicted RBP10.53□□□□□ -0.72
PKP4-208ENST00000462335 TAP1Q03518 808 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 KRT17Q04695 432 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 DSC3Q14574 896 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 GRIN2CQ14957 1233 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 SKIV2LQ15477 1246 aaKnown RBP10.53□□□□□ -0.72
PKP4-208ENST00000462335 HERC4Q5GLZ8 1057 aaPredicted RBP10.53□□□□□ -0.72
PKP4-208ENST00000462335 IFNLR1Q8IU57 520 aaPredicted RBP10.53□□□□□ -0.72
PKP4-208ENST00000462335 TMEM192Q8IY95 271 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 LEO1Q8WVC0 666 aaPredicted RBP10.53□□□□□ -0.72
PKP4-208ENST00000462335 RSPH1Q8WYR4 309 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 RPS6KC1Q96S38 1066 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 CDX2Q99626 313 aaPredicted RBP10.53□□□□□ -0.72
PKP4-208ENST00000462335 REEP2Q9BRK0 252 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 C11orf84Q9BUA3 381 aaPredicted RBP10.53□□□□□ -0.72
PKP4-208ENST00000462335 KIFC3Q9BVG8 833 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 TMEM117Q9H0C3 514 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 TMEM134Q9H6X4 195 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 MRPL44Q9H9J2 332 aaKnown RBP10.53□□□□□ -0.72
PKP4-208ENST00000462335 MTMR10Q9NXD2 777 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 KANSL3Q9P2N6 904 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 PUF60Q9UHX1 559 aaKnown RBP10.53□□□□□ -0.72
PKP4-208ENST00000462335 KCNH3Q9ULD8 1083 aa10.53□□□□□ -0.72
PKP4-208ENST00000462335 CIZ1Q9ULV3 898 aaPredicted RBP10.53□□□□□ -0.72
PKP4-208ENST00000462335 MYH11P35749 1972 aa10.52□□□□□ -0.72
PKP4-208ENST00000462335 TTC3P53804 2025 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 CARNS1A5YM72 827 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 K7ENM7 598 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 TRAK2O60296 914 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 RB1P06400 928 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 ARF4P18085 180 aaPredicted RBP10.52□□□□□ -0.73
PKP4-208ENST00000462335 CMA1P23946 247 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 SYKP43405 635 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 LIG4P49917 911 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 YARSP54577 528 aaKnown RBP10.52□□□□□ -0.73
PKP4-208ENST00000462335 ERVK-21P61565 698 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 GPM6BQ13491 265 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 FAM187BQ17R55 369 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 DCAF4L1Q3SXM0 396 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 ATF7IP2Q5U623 682 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 ADALQ6DHV7 355 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 THNSL1Q8IYQ7 743 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 SYCP3Q8IZU3 236 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 LRRC43Q8N309 656 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 HELQQ8TDG4 1101 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 MICAL1Q8TDZ2 1067 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 SPIRE2Q8WWL2 714 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 LINC01599Q8WXQ3 324 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 PPM1EQ8WY54 764 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 MYLIPQ8WY64 445 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 BSNDQ8WZ55 320 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 DDX12PQ92771 950 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 CCDC94Q9BW85 323 aaPredicted RBP10.52□□□□□ -0.73
PKP4-208ENST00000462335 GBP3Q9H0R5 595 aa10.52□□□□□ -0.73
PKP4-208ENST00000462335 TTYH1Q9H313 450 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms