RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 DARSP14868 501 aaKnown RBP11.71□□□□□ -0.53
RTF1-202ENST00000462276 SFPQP23246 707 aaKnown RBP eCLIP11.71□□□□□ -0.53
RTF1-202ENST00000462276 AXLP30530 894 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 MLLT1Q03111 559 aaPredicted RBP11.71□□□□□ -0.53
RTF1-202ENST00000462276 IQCB1Q15051 598 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 KYAT1Q16773 422 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 TPD52L1Q16890 204 aaPredicted RBP11.71□□□□□ -0.53
RTF1-202ENST00000462276 ZCWPW2Q504Y3 356 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 ZC2HC1CQ53FD0 456 aaPredicted RBP11.71□□□□□ -0.53
RTF1-202ENST00000462276 TTI2Q6NXR4 508 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 C11orf57Q6ZUT1 292 aaPredicted RBP11.71□□□□□ -0.53
RTF1-202ENST00000462276 KSR1Q8IVT5 923 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 FAM114A1Q8IWE2 563 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 FAM126BQ8IXS8 530 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 CTAGE1Q96RT6 745 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 FDXACB1Q9BRP7 624 aaPredicted RBP11.71□□□□□ -0.53
RTF1-202ENST00000462276 CCDC113Q9H0I3 377 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 SEMA6BQ9H3T3 888 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 CBX8Q9HC52 389 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 KIAA1586Q9HCI6 787 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 TRMT13Q9NUP7 481 aaKnown RBP11.71□□□□□ -0.53
RTF1-202ENST00000462276 TRPV2Q9Y5S1 764 aa11.71□□□□□ -0.53
RTF1-202ENST00000462276 ADGRA3Q8IWK6 1321 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 PITPNM1O00562 1244 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 HNRNPDLO14979 420 aaKnown RBP11.7□□□□□ -0.54
RTF1-202ENST00000462276 B4GALT4O60513 344 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 TOM1L1O75674 476 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 PRKCBP05771 671 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 GARTP22102 1010 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 HOXD13P35453 343 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 THPOP40225 353 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 LIG4P49917 911 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 POU5F1Q01860 360 aaKnown RBP11.7□□□□□ -0.54
RTF1-202ENST00000462276 MBTD1Q05BQ5 628 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 C1QBPQ07021 282 aaKnown RBP11.7□□□□□ -0.54
RTF1-202ENST00000462276 SPAG1Q07617 926 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 KIZQ2M2Z5 673 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 TRIM71Q2Q1W2 868 aaKnown RBP11.7□□□□□ -0.54
RTF1-202ENST00000462276 ANKRD40Q6AI12 368 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 TSHZ1Q6ZSZ6 1077 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 NELFCDQ8IXH7 590 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 ZC3H3Q8IXZ2 948 aaKnown RBP11.7□□□□□ -0.54
RTF1-202ENST00000462276 CSGALNACT2Q8N6G5 542 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 GLIS3Q8NEA6 775 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 ANKRD20A12PQ8NF67 263 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 ZBTB10Q96DT7 871 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 CCDC51Q96ER9 411 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 BICD1Q96G01 975 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 MKNK1Q9BUB5 465 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 KIFC3Q9BVG8 833 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 FGFBP2Q9BYJ0 223 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 TRPV6Q9H1D0 765 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 THAP9Q9H5L6 903 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 AGPAT3Q9NRZ7 376 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 CTNND2Q9UQB3 1225 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 NFE2L3Q9Y4A8 694 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 STYXL1Q9Y6J8 313 aa11.7□□□□□ -0.54
RTF1-202ENST00000462276 GOLGA6L3A6NEY3 463 aa11.69□□□□□ -0.54
RTF1-202ENST00000462276 GPR182O15218 404 aa11.69□□□□□ -0.54
RTF1-202ENST00000462276 MAPK13O15264 365 aa11.69□□□□□ -0.54
RTF1-202ENST00000462276 TGFB1I1O43294 461 aa11.69□□□□□ -0.54
RTF1-202ENST00000462276 ERLIN2O94905 339 aa11.69□□□□□ -0.54
RTF1-202ENST00000462276 LDHAP00338 332 aaKnown RBP11.69□□□□□ -0.54
RTF1-202ENST00000462276 ENPEPQ07075 957 aa11.69□□□□□ -0.54
RTF1-202ENST00000462276 ADAM9Q13443 819 aa11.69□□□□□ -0.54
RTF1-202ENST00000462276 PRPF4BQ13523 1007 aaKnown RBP11.69□□□□□ -0.54
RTF1-202ENST00000462276 GSE1Q14687 1217 aa11.69□□□□□ -0.54
RTF1-202ENST00000462276 TAS1R3Q7RTX0 852 aa11.69□□□□□ -0.54
RTF1-202ENST00000462276 FILIP1Q7Z7B0 1213 aa11.69□□□□□ -0.54
RTF1-202ENST00000462276 GAS2L3Q86XJ1 694 aa11.69□□□□□ -0.54
RTF1-202ENST00000462276 DHX40Q8IX18 779 aaKnown RBP11.69□□□□□ -0.54
RTF1-202ENST00000462276 PAWRQ96IZ0 340 aaKnown RBP11.69□□□□□ -0.54
RTF1-202ENST00000462276 METTL14Q9HCE5 456 aaKnown RBP11.69□□□□□ -0.54
RTF1-202ENST00000462276 CHST12Q9NRB3 414 aa11.69□□□□□ -0.54
RTF1-202ENST00000462276 DMAC2Q9NW81 257 aa11.69□□□□□ -0.54
RTF1-202ENST00000462276 MAGEC2Q9UBF1 373 aaPredicted RBP11.69□□□□□ -0.54
RTF1-202ENST00000462276 TNFSF13BQ9Y275 285 aa11.69□□□□□ -0.54
RTF1-202ENST00000462276 CDY2AQ9Y6F7 541 aa11.69□□□□□ -0.54
RTF1-202ENST00000462276 KIAA0100Q14667 2235 aaKnown RBP11.69□□□□□ -0.54
RTF1-202ENST00000462276 DOCK5Q9H7D0 1870 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 CNTNAP2Q9UHC6 1331 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 A0A1B0GUA9 196 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 FSD2A1L4K1 749 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 LRRC10BA6NIK2 292 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 SLC16A3O15427 465 aaKnown RBP11.68□□□□□ -0.54
RTF1-202ENST00000462276 CLDN3O15551 220 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 CHRNA1P02708 482 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 NR3C1P04150 777 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 CKBP12277 381 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 SELPP16109 830 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 EEF1GP26641 437 aaKnown RBP11.68□□□□□ -0.54
RTF1-202ENST00000462276 STX17P56962 302 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 TLE2Q04725 743 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 MGAT3Q09327 533 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 KCNA1Q09470 495 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 NCAPHQ15003 741 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 CATSPER4Q7RTX7 472 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 UBE2Q1Q7Z7E8 422 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 USP37Q86T82 979 aa11.68□□□□□ -0.54
RTF1-202ENST00000462276 AOPEPQ8N6M6 819 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms