RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, human

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH23-208	ENST00000461841	PLEKHH3	Q7Z736	793 aa		27.7	■■■□□ 2.02
CDH23-208	ENST00000461841	DEPTOR	Q8TB45	409 aa		27.7	■■■□□ 2.02
CDH23-208	ENST00000461841	BICD1	Q96G01	975 aa		27.7	■■■□□ 2.02
CDH23-208	ENST00000461841	IFIH1	Q9BYX4	1025 aa	Known RBP	27.7	■■■□□ 2.02
CDH23-208	ENST00000461841	SMARCAD1	Q9H4L7	1026 aa		27.7	■■■□□ 2.02
CDH23-208	ENST00000461841	ZNF215	Q9UL58	517 aa	Predicted RBP	27.7	■■■□□ 2.02
CDH23-208	ENST00000461841	PCDHA13	Q9Y5I0	950 aa		27.7	■■■□□ 2.02
CDH23-208	ENST00000461841	RBM47	A0AV96	593 aa	Known RBP	27.69	■■■□□ 2.02
CDH23-208	ENST00000461841	KRT86	O43790	486 aa		27.69	■■■□□ 2.02
CDH23-208	ENST00000461841	GART	P22102	1010 aa		27.69	■■■□□ 2.02
CDH23-208	ENST00000461841	MAPK4	P31152	587 aa		27.69	■■■□□ 2.02
CDH23-208	ENST00000461841	KLHL30	Q0D2K2	578 aa		27.69	■■■□□ 2.02
CDH23-208	ENST00000461841	ASIC2	Q16515	512 aa		27.69	■■■□□ 2.02
CDH23-208	ENST00000461841	RASAL3	Q86YV0	1011 aa		27.69	■■■□□ 2.02
CDH23-208	ENST00000461841	SLC35F6	Q8N357	371 aa		27.69	■■■□□ 2.02
CDH23-208	ENST00000461841	LMO3	Q8TAP4	145 aa		27.69	■■■□□ 2.02
CDH23-208	ENST00000461841	INTS2	Q9H0H0	1204 aa	Known RBP	27.69	■■■□□ 2.02
CDH23-208	ENST00000461841	GCLM	P48507	274 aa		27.68	■■■□□ 2.02
CDH23-208	ENST00000461841	GFPT1	Q06210	699 aa	Predicted RBP	27.68	■■■□□ 2.02
CDH23-208	ENST00000461841	LAMC2	Q13753	1193 aa		27.68	■■■□□ 2.02
CDH23-208	ENST00000461841	PRPF31	Q8WWY3	499 aa	Known RBP	27.68	■■■□□ 2.02
CDH23-208	ENST00000461841	MAML3	Q96JK9	1138 aa		27.68	■■■□□ 2.02
CDH23-208	ENST00000461841	TRPM7	Q96QT4	1865 aa		27.68	■■■□□ 2.02
CDH23-208	ENST00000461841	RBAK-RBAKDN	I3L0D1	243 aa		27.68	■■■□□ 2.02
CDH23-208	ENST00000461841		K7ERI5	159 aa		27.68	■■■□□ 2.02
CDH23-208	ENST00000461841	IGF2BP3	O00425	579 aa	Known RBP eCLIP	27.68	■■■□□ 2.02
CDH23-208	ENST00000461841	SLU7	O95391	586 aa	Known RBP	27.68	■■■□□ 2.02
CDH23-208	ENST00000461841	STRN3	Q13033	797 aa		27.68	■■■□□ 2.02
CDH23-208	ENST00000461841	USP20	Q9Y2K6	914 aa		27.68	■■■□□ 2.02
CDH23-208	ENST00000461841	DUSP10	Q9Y6W6	482 aa		27.68	■■■□□ 2.02
CDH23-208	ENST00000461841	P4HA2	O15460	535 aa		27.67	■■■□□ 2.02
CDH23-208	ENST00000461841	MKRN4P	Q13434	485 aa	Predicted RBP	27.67	■■■□□ 2.02
CDH23-208	ENST00000461841	CAPS	Q13938	189 aa		27.67	■■■□□ 2.02
CDH23-208	ENST00000461841	EHBP1	Q8NDI1	1231 aa		27.67	■■■□□ 2.02
CDH23-208	ENST00000461841	MFSD14A	Q96MC6	490 aa		27.67	■■■□□ 2.02
CDH23-208	ENST00000461841	CPA4	Q9UI42	421 aa		27.67	■■■□□ 2.02
CDH23-208	ENST00000461841	IGKV6-21	A0A0C4DH24	114 aa		27.67	■■■□□ 2.02
CDH23-208	ENST00000461841	N4BP1	O75113	896 aa	Known RBP	27.67	■■■□□ 2.02
CDH23-208	ENST00000461841	ADCYAP1R1	P41586	468 aa		27.67	■■■□□ 2.02
CDH23-208	ENST00000461841	LIG4	P49917	911 aa		27.67	■■■□□ 2.02
CDH23-208	ENST00000461841	KIF5A	Q12840	1032 aa		27.67	■■■□□ 2.02
CDH23-208	ENST00000461841	PARD3B	Q8TEW8	1205 aa		27.67	■■■□□ 2.02
CDH23-208	ENST00000461841	SUGCT	Q9HAC7	445 aa		27.67	■■■□□ 2.02
CDH23-208	ENST00000461841	APEX2	Q9UBZ4	518 aa		27.67	■■■□□ 2.02
CDH23-208	ENST00000461841	GH1	P01241	217 aa		27.66	■■■□□ 2.02
CDH23-208	ENST00000461841	ENOX2	Q16206	610 aa	Known RBP	27.66	■■■□□ 2.02
CDH23-208	ENST00000461841	IER5	Q5VY09	327 aa		27.66	■■■□□ 2.02
CDH23-208	ENST00000461841	SAPCD2	Q86UD0	394 aa		27.66	■■■□□ 2.02
CDH23-208	ENST00000461841	GPD1L	Q8N335	351 aa		27.66	■■■□□ 2.02
CDH23-208	ENST00000461841	STK33	Q9BYT3	514 aa		27.66	■■■□□ 2.02
CDH23-208	ENST00000461841	STYXL1	Q9Y6J8	313 aa		27.66	■■■□□ 2.02
CDH23-208	ENST00000461841	PMM2	O15305	246 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	ADCY3	O60266	1144 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	PTK2	Q05397	1052 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	CETN1	Q12798	172 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	PHLDB3	Q6NSJ2	640 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	EXOC8	Q8IYI6	725 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	CCDC127	Q96BQ5	260 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	TMEM117	Q9H0C3	514 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	DNAJC12	Q9UKB3	198 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	TRPC6	Q9Y210	931 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	BZW2	Q9Y6E2	419 aa	Known RBP	27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	PIGR	P01833	764 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	SLC18A3	Q16572	532 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	EPC2	Q52LR7	807 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	EMID1	Q96A84	441 aa	Predicted RBP	27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	TINF2	Q9BSI4	451 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	TSGA10	Q9BZW7	698 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	RNPEP	Q9H4A4	650 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	TMEM134	Q9H6X4	195 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	ERAP1	Q9NZ08	941 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	ADGRA2	Q96PE1	1338 aa		27.65	■■■□□ 2.02
CDH23-208	ENST00000461841	CTAGE9	A4FU28	777 aa		27.64	■■■□□ 2.02
CDH23-208	ENST00000461841	MANSC4	A6NHS7	340 aa	Predicted RBP	27.64	■■■□□ 2.02
CDH23-208	ENST00000461841	SLC15A5	A6NIM6	579 aa		27.64	■■■□□ 2.02
CDH23-208	ENST00000461841	GAS2	O43903	313 aa	Known RBP	27.64	■■■□□ 2.02
CDH23-208	ENST00000461841	PRKCI	P41743	596 aa		27.64	■■■□□ 2.02
CDH23-208	ENST00000461841	MAGEA1	P43355	309 aa		27.64	■■■□□ 2.02
CDH23-208	ENST00000461841	PPTC7	Q8NI37	304 aa		27.64	■■■□□ 2.02
CDH23-208	ENST00000461841	NPLOC4	Q8TAT6	608 aa		27.64	■■■□□ 2.02
CDH23-208	ENST00000461841	TMC2	Q8TDI7	906 aa		27.64	■■■□□ 2.02
CDH23-208	ENST00000461841	ADAMTS1	Q9UHI8	967 aa		27.64	■■■□□ 2.02
CDH23-208	ENST00000461841		A0A087X0T9	212 aa		27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	HBP1	O60381	514 aa		27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	FAM228B	P0C875	321 aa		27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	CYP24A1	Q07973	514 aa		27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	LRRC71	Q8N4P6	559 aa		27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	TRAPPC12	Q8WVT3	735 aa		27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	TCP11	Q8WWU5	503 aa		27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	POP1	Q99575	1024 aa	Known RBP	27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	FAM213A	Q9BRX8	229 aa		27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	MRFAP1	Q9Y605	127 aa		27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	SI	P14410	1827 aa		27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	LRRIQ3	A6PVS8	624 aa	Predicted RBP	27.63	■■■□□ 2.01
CDH23-208	ENST00000461841		F8VZ95	297 aa		27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	LRRN2	O75325	713 aa		27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	PNMA6A	P0CW24	399 aa	Predicted RBP	27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	MXI1	P50539	228 aa		27.63	■■■□□ 2.01
CDH23-208	ENST00000461841	LAMTOR4	Q0VGL1	99 aa		27.63	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms