RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SLITRK6Q9H5Y7 841 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 FAM204AQ9H8W3 233 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 OBP2AQ9NY56 170 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 SAE1Q9UBE0 346 aaPredicted RBP3.91□□□□□ -1.78
HDAC6-212ENST00000461608 GABBR1Q9UBS5 961 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 Q9UFV3 132 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 DPP7Q9UHL4 492 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 TMPRSS11EQ9UL52 423 aa3.91□□□□□ -1.78
HDAC6-212ENST00000461608 FAM227AF5H4B4 570 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 PHF2O75151 1096 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 ENDOD1O94919 500 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 PHKG2P15735 406 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 C5AR1P21730 350 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 KIF23Q02241 960 aaPredicted RBP3.9□□□□□ -1.79
HDAC6-212ENST00000461608 MGAT2Q10469 447 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 ADAM9Q13443 819 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 TRIM25Q14258 630 aaKnown RBP3.9□□□□□ -1.79
HDAC6-212ENST00000461608 NOLC1Q14978 699 aaKnown RBP eCLIP3.9□□□□□ -1.79
HDAC6-212ENST00000461608 ADRM1Q16186 407 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 UAP1L1Q3KQV9 507 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 WDR72Q3MJ13 1102 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 ATAT1Q5SQI0 421 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 THEMIS2Q5TEJ8 643 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 BTNL9Q6UXG8 535 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 OTOP2Q7RTS6 562 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 SRGAP1Q7Z6B7 1085 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 PPP1R14CQ8TAE6 165 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 HDAC10Q969S8 669 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 GFM2Q969S9 779 aaKnown RBP3.9□□□□□ -1.79
HDAC6-212ENST00000461608 RUNDC1Q96C34 613 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 DYDC2Q96IM9 177 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 TACO1Q9BSH4 297 aaKnown RBP3.9□□□□□ -1.79
HDAC6-212ENST00000461608 MRIQ9BWK5 157 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 SLC12A5Q9H2X9 1139 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 BCAS3Q9H6U6 928 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 GREM2Q9H772 168 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 ARNT2Q9HBZ2 717 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 SMPD4Q9NXE4 827 aa3.9□□□□□ -1.79
HDAC6-212ENST00000461608 SLC16A6O15403 523 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 SGTAO43765 313 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 POU2F2P09086 479 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 TRIM27P14373 513 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 TNFRSF1AP19438 455 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 POLD1P28340 1107 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 MC3RP41968 323 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 ETV4P43268 484 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 WNT3AP56704 352 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 FOXO4P98177 505 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 CDK17Q00537 523 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 OS9Q13438 667 aaPredicted RBP3.89□□□□□ -1.79
HDAC6-212ENST00000461608 UBE4AQ14139 1066 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 ARHGAP29Q52LW3 1261 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 ZFYVE27Q5T4F4 411 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 SLC4A10Q6U841 1118 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 LRSAM1Q6UWE0 723 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 UNQ6494/PRO21346Q6UXR6 183 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 USP45Q70EL2 814 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 ADGRG2Q8IZP9 1017 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 FAM26EQ8N5C1 309 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 SAMD3Q8N6K7 520 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 GLB1L3Q8NCI6 653 aaPredicted RBP3.89□□□□□ -1.79
HDAC6-212ENST00000461608 SLC35G2Q8TBE7 412 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 DIS3LQ8TF46 1054 aaKnown RBP3.89□□□□□ -1.79
HDAC6-212ENST00000461608 HPS3Q969F9 1004 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 COA7Q96BR5 231 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 C1GALT1C1Q96EU7 318 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 TAAR9Q96RI9 348 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 GORASP1Q9BQQ3 440 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 KMT5AQ9NQR1 393 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 MAN1C1Q9NR34 630 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 RBM12Q9NTZ6 932 aaKnown RBP3.89□□□□□ -1.79
HDAC6-212ENST00000461608 EVLQ9UI08 416 aaPredicted RBP3.89□□□□□ -1.79
HDAC6-212ENST00000461608 SCOCQ9UIL1 159 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 TUBD1Q9UJT1 453 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 USP18Q9UMW8 372 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 CFAP20Q9Y6A4 193 aaKnown RBP3.89□□□□□ -1.79
HDAC6-212ENST00000461608 PMF1-BGLAPU3KQ54 211 aa3.89□□□□□ -1.79
HDAC6-212ENST00000461608 H3BML4 177 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 CYR61O00622 381 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 FFAR3O14843 346 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 PRPF3O43395 683 aaKnown RBP3.88□□□□□ -1.79
HDAC6-212ENST00000461608 IL18BPO95998 194 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 KNG1P01042 644 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 PLA2G1BP04054 148 aaKnown RBP3.88□□□□□ -1.79
HDAC6-212ENST00000461608 HRGP04196 525 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 ATF2P15336 505 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 THBS2P35442 1172 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 MCAMP43121 646 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 LIMS1P48059 325 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 GLRBP48167 497 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 CD83Q01151 205 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 EIF4HQ15056 248 aaKnown RBP3.88□□□□□ -1.79
HDAC6-212ENST00000461608 BRD3Q15059 726 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 PGS1Q32NB8 556 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 LONRF3Q496Y0 759 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 B3GNT9Q6UX72 402 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 CATIPQ7Z7H3 387 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 LYSMD2Q8IV50 215 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 DENND1CQ8IV53 801 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 FAM43AQ8N2R8 423 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms