RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 CNPY4Q8N129 248 aa12.17□□□□□ -0.46
COPS7B-217ENST00000461350 RNF10Q8N5U6 811 aaKnown RBP12.17□□□□□ -0.46
COPS7B-217ENST00000461350 CABS1Q96KC9 395 aa12.17□□□□□ -0.46
COPS7B-217ENST00000461350 EPN3Q9H201 632 aa12.17□□□□□ -0.46
COPS7B-217ENST00000461350 GDF3Q9NR23 364 aa12.17□□□□□ -0.46
COPS7B-217ENST00000461350 PPP1R37O75864 691 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 STXBP2Q15833 593 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 CCDC40Q4G0X9 1142 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 ZC2HC1CQ53FD0 456 aaPredicted RBP12.16□□□□□ -0.46
COPS7B-217ENST00000461350 TSG101Q99816 390 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 PORCNQ9H237 461 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 FBXO40Q9UH90 709 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 MCM3APO60318 1980 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 PFASO15067 1338 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 E7EVH7 732 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 YWHABP31946 246 aaKnown RBP12.16□□□□□ -0.46
COPS7B-217ENST00000461350 HOXD13P35453 343 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 KRT76Q01546 638 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 TRADDQ15628 312 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 ZCWPW2Q504Y3 356 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 SFMBT2Q5VUG0 894 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 PADI6Q6TGC4 694 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 LRRC55Q6ZSA7 311 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 SPATS2Q86XZ4 545 aaKnown RBP12.16□□□□□ -0.46
COPS7B-217ENST00000461350 ZNF473Q8WTR7 871 aaKnown RBP12.16□□□□□ -0.46
COPS7B-217ENST00000461350 CASKIN2Q8WXE0 1202 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 ATP6V1G3Q96LB4 118 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 KCTD10Q9H3F6 313 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 RNF14Q9UBS8 474 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 COL4A3BPQ9Y5P4 624 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 WDR81Q562E7 1941 aa12.16□□□□□ -0.46
COPS7B-217ENST00000461350 CCL15-CCL14A0A0B4J2E2 113 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 LRRC63Q05C16 580 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 IFT88Q13099 833 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 CCL15Q16663 113 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 CYFIP1Q7L576 1253 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 NEK9Q8TD19 979 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 MS4A4AQ96JQ5 239 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 PPANQ9NQ55 473 aaKnown RBP12.15□□□□□ -0.46
COPS7B-217ENST00000461350 GABBR1Q9UBS5 961 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 PLAAQ9Y263 795 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 SSU72P8A0A1W2PR75 194 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 SPATA31C2B4DYI2 1134 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 BTBD19C9JJ37 291 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 PDHXO00330 501 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 HIP1RO75146 1068 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 RARRES1P49788 294 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 POLR2FP61218 127 aaKnown RBP12.15□□□□□ -0.46
COPS7B-217ENST00000461350 PTGISQ16647 500 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 GNPTABQ3T906 1256 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 DNERQ8NFT8 737 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 BRI3BPQ8WY22 251 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 TAF4BQ92750 862 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 CCT8L2Q96SF2 557 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 JPH1Q9HDC5 661 aaPredicted RBP12.15□□□□□ -0.46
COPS7B-217ENST00000461350 BACH1O14867 736 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 KLRC1P26715 233 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 MAP2K2P36507 400 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 MDH1P40925 334 aaKnown RBP12.15□□□□□ -0.46
COPS7B-217ENST00000461350 ERVK-9P63128 1117 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 TNNC1P63316 161 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 RAPGEF1Q13905 1077 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 KIAA0753Q2KHM9 967 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 SWSAP1Q6NVH7 229 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 NLRP14Q86W24 1093 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 DAW1Q8N136 415 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 FAM133AQ8N9E0 248 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 WHAMMQ8TF30 809 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 IWS1Q96ST2 819 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 PARVGQ9HBI0 331 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 GPRC5CQ9NQ84 441 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 SLC9A2Q9UBY0 812 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 PCDHA10Q9Y5I2 948 aa12.15□□□□□ -0.46
COPS7B-217ENST00000461350 ZNF862O60290 1169 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 MUTP22033 750 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 JAK3P52333 1124 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 ACTR2P61160 394 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 PSMC5P62195 406 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 ASTE1Q2TB18 679 aaPredicted RBP12.14□□□□□ -0.47
COPS7B-217ENST00000461350 ODR4Q5SWX8 454 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 HGSNATQ68CP4 663 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 C2orf69Q8N8R5 385 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 MYCBPAPQ8TBZ2 947 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 LSM14BQ9BX40 385 aaKnown RBP12.14□□□□□ -0.47
COPS7B-217ENST00000461350 ZNFX1Q9P2E3 1918 aaKnown RBP12.14□□□□□ -0.47
COPS7B-217ENST00000461350 RAD51CO43502 376 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 FSBPO95073 299 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 SERPING1P05155 500 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 MAPK7Q13164 816 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 XKR9Q5GH70 373 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 CST9Q5W186 159 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 ZNF746Q6NUN9 644 aaPredicted RBP12.14□□□□□ -0.47
COPS7B-217ENST00000461350 EPM2AIP1Q7L775 607 aaPredicted RBP12.14□□□□□ -0.47
COPS7B-217ENST00000461350 CCDC60Q8IWA6 550 aaPredicted RBP12.14□□□□□ -0.47
COPS7B-217ENST00000461350 PIK3R5Q8WYR1 880 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 MMP19Q99542 508 aa12.14□□□□□ -0.47
COPS7B-217ENST00000461350 JPH2Q9BR39 696 aaPredicted RBP12.14□□□□□ -0.47
COPS7B-217ENST00000461350 BCCIPQ9P287 314 aaKnown RBP eCLIP12.14□□□□□ -0.47
COPS7B-217ENST00000461350 HMGB1P1B2RPK0 211 aaPredicted RBP12.13□□□□□ -0.47
COPS7B-217ENST00000461350 CLIC2O15247 247 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms