RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 GPC5P78333 572 aa14.36□□□□□ -0.11
C9orf78-202ENST00000461349 SETQ01105 290 aaPredicted RBP14.36□□□□□ -0.11
C9orf78-202ENST00000461349 MLF2Q15773 248 aaPredicted RBP14.36□□□□□ -0.11
C9orf78-202ENST00000461349 WWC2Q6AWC2 1192 aa14.36□□□□□ -0.11
C9orf78-202ENST00000461349 CHD1LQ86WJ1 897 aa14.36□□□□□ -0.11
C9orf78-202ENST00000461349 NETO1Q8TDF5 533 aa14.36□□□□□ -0.11
C9orf78-202ENST00000461349 RUFY2Q8WXA3 655 aa14.36□□□□□ -0.11
C9orf78-202ENST00000461349 ZNF707Q96C28 371 aaPredicted RBP14.36□□□□□ -0.11
C9orf78-202ENST00000461349 MTA3Q9BTC8 594 aa14.36□□□□□ -0.11
C9orf78-202ENST00000461349 GLT8D2Q9H1C3 349 aa14.36□□□□□ -0.11
C9orf78-202ENST00000461349 PLEKHA4Q9H4M7 779 aa14.36□□□□□ -0.11
C9orf78-202ENST00000461349 KANSL3Q9P2N6 904 aa14.36□□□□□ -0.11
C9orf78-202ENST00000461349 TAF6LQ9Y6J9 622 aa14.36□□□□□ -0.11
C9orf78-202ENST00000461349 COL4A3Q01955 1670 aa14.36□□□□□ -0.11
C9orf78-202ENST00000461349 DOCK6Q96HP0 2047 aa14.36□□□□□ -0.11
C9orf78-202ENST00000461349 FAM170BA6NMN3 283 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 MEIS3P2A8K0S8 358 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 NRP1O14786 923 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 NCAM2O15394 837 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 PRC1O43663 620 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 LILRB5O75023 590 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 ZNF623O75123 536 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 DDHD2O94830 711 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 SPATA31D3P0C874 917 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 DNM2P50570 870 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 SPATA31D4Q6ZUB0 917 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 TMTC3Q6ZXV5 915 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 DDX23Q9BUQ8 820 aaKnown RBP14.35□□□□□ -0.11
C9orf78-202ENST00000461349 HERC2P3Q9BVR0 1158 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 NT5C3AQ9H0P0 336 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 ZDHHC7Q9NXF8 308 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 SLC12A7Q9Y666 1083 aa14.35□□□□□ -0.11
C9orf78-202ENST00000461349 IGLV3-22A0A075B6J6 115 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 SMCO2A6NFE2 343 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 WDR64B1ANS9 1081 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 hCG_1984214I3L0E3 225 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 B4GALT3O60512 393 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 FSHRP23945 695 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 MCM5P33992 734 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 PFKPQ01813 784 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 PRKCEQ02156 737 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 PTH1RQ03431 593 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 SLC44A4Q53GD3 710 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 ZBTB41Q5SVQ8 909 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 RSPO2Q6UXX9 243 aaPredicted RBP14.34□□□□□ -0.11
C9orf78-202ENST00000461349 MTSS1LQ765P7 747 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 CATSPER4Q7RTX7 472 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 PALB2Q86YC2 1186 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 ZNF713Q8N859 430 aaPredicted RBP14.34□□□□□ -0.11
C9orf78-202ENST00000461349 FANCBQ8NB91 859 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 ST13P5Q8NFI4 369 aaPredicted RBP14.34□□□□□ -0.11
C9orf78-202ENST00000461349 TMEM87BQ96K49 555 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 FAM126AQ9BYI3 521 aaPredicted RBP14.34□□□□□ -0.11
C9orf78-202ENST00000461349 PRKD2Q9BZL6 878 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 RSAD1Q9HA92 442 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 CNTNAP2Q9UHC6 1331 aa14.34□□□□□ -0.11
C9orf78-202ENST00000461349 A0A087WZ62 844 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 SH2B2O14492 632 aaPredicted RBP14.33□□□□□ -0.12
C9orf78-202ENST00000461349 SLC30A4O14863 429 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 GAS2O43903 313 aaKnown RBP14.33□□□□□ -0.12
C9orf78-202ENST00000461349 C1RP00736 705 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 KCNA4P22459 653 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 TGM1P22735 817 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 SPEM2Q0P670 501 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 COL9A3Q14050 684 aaPredicted RBP14.33□□□□□ -0.12
C9orf78-202ENST00000461349 TYW1BQ6NUM6 668 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 ZNF410Q86VK4 478 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 RAB11FIP4Q86YS3 637 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 SMC5Q8IY18 1101 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 NELL1Q92832 810 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 FGF14Q92915 247 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 NELL2Q99435 816 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 FDXACB1Q9BRP7 624 aaPredicted RBP14.33□□□□□ -0.12
C9orf78-202ENST00000461349 RXFP1Q9HBX9 757 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 PARD6AQ9NPB6 346 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 LTB4R2Q9NPC1 389 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 ANGPTL2Q9UKU9 493 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 PRG3Q9Y2Y8 225 aaPredicted RBP14.33□□□□□ -0.12
C9orf78-202ENST00000461349 MTF2Q9Y483 593 aaPredicted RBP14.33□□□□□ -0.12
C9orf78-202ENST00000461349 PCDHB2Q9Y5E7 798 aa14.33□□□□□ -0.12
C9orf78-202ENST00000461349 FAM208BQ5VWN6 2430 aa14.32□□□□□ -0.12
C9orf78-202ENST00000461349 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.32□□□□□ -0.12
C9orf78-202ENST00000461349 NR1I2O75469 434 aa14.32□□□□□ -0.12
C9orf78-202ENST00000461349 PAPLNO95428 1278 aa14.32□□□□□ -0.12
C9orf78-202ENST00000461349 POMCP01189 267 aa14.32□□□□□ -0.12
C9orf78-202ENST00000461349 CYP3A4P08684 503 aa14.32□□□□□ -0.12
C9orf78-202ENST00000461349 LIFRP42702 1097 aa14.32□□□□□ -0.12
C9orf78-202ENST00000461349 OR1G1P47890 313 aa14.32□□□□□ -0.12
C9orf78-202ENST00000461349 CLK2P49760 499 aaKnown RBP14.32□□□□□ -0.12
C9orf78-202ENST00000461349 NRLP54845 237 aa14.32□□□□□ -0.12
C9orf78-202ENST00000461349 COL9A2Q14055 689 aaPredicted RBP14.32□□□□□ -0.12
C9orf78-202ENST00000461349 LAIR1Q6GTX8 287 aa14.32□□□□□ -0.12
C9orf78-202ENST00000461349 TSSK4Q6SA08 328 aa14.32□□□□□ -0.12
C9orf78-202ENST00000461349 PARM1Q6UWI2 310 aa14.32□□□□□ -0.12
C9orf78-202ENST00000461349 SYNE3Q6ZMZ3 975 aa14.32□□□□□ -0.12
C9orf78-202ENST00000461349 MICU3Q86XE3 530 aa14.32□□□□□ -0.12
C9orf78-202ENST00000461349 DDX1Q92499 740 aaKnown RBP14.32□□□□□ -0.12
C9orf78-202ENST00000461349 RPP25Q9BUL9 199 aaKnown RBP14.32□□□□□ -0.12
C9orf78-202ENST00000461349 RWDD1Q9H446 243 aaPredicted RBP14.32□□□□□ -0.12
C9orf78-202ENST00000461349 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms