RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 DAXXQ9UER7 740 aaPredicted RBP16.32■□□□□ 0.2
DNMT3A-207ENST00000461228 COL4A3BPQ9Y5P4 624 aa16.32■□□□□ 0.2
DNMT3A-207ENST00000461228 TBX3O15119 743 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 DEXIO95424 95 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 SOD2P04179 222 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 FGFR4P22455 802 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 SP100P23497 879 aaPredicted RBP16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 PSMA5P28066 241 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 SLC11A1P49279 550 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 RNASELQ05823 741 aaKnown RBP16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 LETM2Q2VYF4 491 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 ASCL5Q7RTU5 278 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 CATSPER4Q7RTX7 472 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 STAMQ92783 540 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 NKD2Q969F2 451 aaPredicted RBP16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 FAM20AQ96MK3 541 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 JAKMIP1Q96N16 626 aaKnown RBP16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 SLC26A6Q9BXS9 759 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 SEMA4AQ9H3S1 761 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 RSAD1Q9HA92 442 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 KCNMB3Q9NPA1 279 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 MRPL17Q9NRX2 175 aaKnown RBP16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 SUCLA2Q9P2R7 463 aaPredicted RBP16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 EPS15L1Q9UBC2 864 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 PCDHB2Q9Y5E7 798 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 SNX14Q9Y5W7 946 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 MIA3Q5JRA6 1907 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 PATJQ8NI35 1801 aa16.31■□□□□ 0.2
DNMT3A-207ENST00000461228 NT5C1B-RDH14C9J2C7 533 aa16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 URODP06132 367 aa16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 ASGR2P07307 311 aa16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 ADH1AP07327 375 aa16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 NCLP19338 710 aaKnown RBP16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 AXLP30530 894 aa16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 QARSP47897 775 aaKnown RBP16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 NONOQ15233 471 aaKnown RBP eCLIP16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 NPY5RQ15761 445 aa16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 PPP4R3AQ6IN85 833 aa16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 AGMOQ6ZNB7 445 aa16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 TRMT1LQ7Z2T5 733 aaKnown RBP16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 IFNLR1Q8IU57 520 aaPredicted RBP16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 RHPN2Q8IUC4 686 aa16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 PSPC1Q8WXF1 523 aaKnown RBP16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 NAP1L4Q99733 375 aaKnown RBP16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 DNAJB4Q9UDY4 337 aa16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 VAV3Q9UKW4 847 aa16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 NAP1L2Q9ULW6 460 aaPredicted RBP16.3■□□□□ 0.2
DNMT3A-207ENST00000461228 CEP250Q9BV73 2442 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 B4GALT3O60512 393 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 TDP2O95551 362 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 CNPP09543 421 aaKnown RBP16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 PDIA3P30101 505 aaKnown RBP16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 NLRP5P59047 1200 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 CREMQ03060 361 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 POU5F1BQ06416 359 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 DSC1Q08554 894 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 TMC5Q6UXY8 1006 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 KRT25Q7Z3Z0 450 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 BLIDQ8IZY5 108 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 TCP11Q8WWU5 503 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 LPPQ93052 612 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 NLRP4Q96MN2 994 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 KLHL5Q96PQ7 755 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 RPS6KC1Q96S38 1066 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 NFKBIZQ9BYH8 718 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 RXFP1Q9HBX9 757 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 WDR6Q9NNW5 1121 aaKnown RBP16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 WNT16Q9UBV4 365 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 DDX25Q9UHL0 483 aaKnown RBP16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 MYH15Q9Y2K3 1946 aa16.29■□□□□ 0.2
DNMT3A-207ENST00000461228 CLUHO75153 1309 aa16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 STK36Q9NRP7 1315 aa16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 MEIS3P2A8K0S8 358 aa16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 ASAP2O43150 1006 aa16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 REC8O95072 547 aa16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 NPR3P17342 541 aa16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 HOXA11P31270 313 aaPredicted RBP16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 C4orf19Q8IY42 314 aa16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 AUTS2Q8WXX7 1259 aa16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 ZNF668Q96K58 619 aaPredicted RBP16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 SMOC2Q9H3U7 446 aa16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 PLEKHA4Q9H4M7 779 aa16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 KCNK12Q9HB15 430 aa16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 MARCH5Q9NX47 278 aa16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 ZDHHC7Q9NXF8 308 aa16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 LIMD1Q9UGP4 676 aa16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 INPP5FQ9Y2H2 1132 aa16.28■□□□□ 0.2
DNMT3A-207ENST00000461228 CSDE1O75534 798 aaKnown RBP16.27■□□□□ 0.2
DNMT3A-207ENST00000461228 GLUD1P00367 558 aa16.27■□□□□ 0.2
DNMT3A-207ENST00000461228 P4HBP07237 508 aaKnown RBP16.27■□□□□ 0.2
DNMT3A-207ENST00000461228 CA8P35219 290 aa16.27■□□□□ 0.2
DNMT3A-207ENST00000461228 GLUD2P49448 558 aa16.27■□□□□ 0.2
DNMT3A-207ENST00000461228 UBXN11Q5T124 520 aa16.27■□□□□ 0.2
DNMT3A-207ENST00000461228 C12orf76Q8N812 135 aaPredicted RBP16.27■□□□□ 0.2
DNMT3A-207ENST00000461228 ZNF274Q96GC6 653 aaPredicted RBP16.27■□□□□ 0.2
DNMT3A-207ENST00000461228 MAN1C1Q9NR34 630 aa16.27■□□□□ 0.2
DNMT3A-207ENST00000461228 ZFP37Q9Y6Q3 630 aaPredicted RBP16.27■□□□□ 0.2
DNMT3A-207ENST00000461228 TMEM150BA6NC51 233 aa16.26■□□□□ 0.19
DNMT3A-207ENST00000461228 NRP1O14786 923 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms