RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 ASCC2Q9H1I8 757 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-205ENST00000461221 WNT8AQ9H1J5 351 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 ADNPQ9H2P0 1102 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 ETNK1Q9HBU6 452 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 DYRK4Q9NR20 520 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 DCTN4Q9UJW0 460 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 IMPDH2P12268 514 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 MAPK6Q16659 721 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 HIF1AQ16665 826 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 SLFNL1Q499Z3 407 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 CAPRIN2Q6IMN6 1127 aaKnown RBP9.53□□□□□ -0.88
BRCA1-205ENST00000461221 PKN3Q6P5Z2 889 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 NUDT18Q6ZVK8 323 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 SCN4BQ8IWT1 228 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 PPHLN1Q8NEY8 458 aaKnown RBP9.53□□□□□ -0.88
BRCA1-205ENST00000461221 ZNF564Q8TBZ8 553 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-205ENST00000461221 DCAF4Q8WV16 495 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 BTN2A2Q8WVV5 523 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 RUBCNQ92622 972 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 SH3GL2Q99962 352 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 SH3GL3Q99963 347 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 C2orf40Q9H1Z8 148 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 TMEM245Q9H330 911 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 TBC1D23Q9NUY8 699 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 TMEM161AQ9NX61 479 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 UGGT2Q9NYU1 1516 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 UBA6A0AVT1 1052 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-205ENST00000461221 PSMD3O43242 534 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 KIF1CO43896 1103 aaKnown RBP9.53□□□□□ -0.88
BRCA1-205ENST00000461221 PYGMP11217 842 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 PDIA2Q13087 525 aaKnown RBP9.53□□□□□ -0.88
BRCA1-205ENST00000461221 BTNL9Q6UXG8 535 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 LUZP2Q86TE4 346 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 TRIM69Q86WT6 500 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 MFN1Q8IWA4 741 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 XXYLT1Q8NBI6 393 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 APPL2Q8NEU8 664 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 HEMGNQ9BXL5 484 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 CYP4F11Q9HBI6 524 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 MAD2L2Q9UI95 211 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 PLXNC1O60486 1568 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 PHKG2P15735 406 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 TYK2P29597 1187 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 MEI1Q5TIA1 1274 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 BBS7Q8IWZ6 715 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 THNSL1Q8IYQ7 743 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 ASAP3Q8TDY4 903 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 CNBD2Q96M20 576 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 SRPK1Q96SB4 655 aaKnown RBP9.53□□□□□ -0.88
BRCA1-205ENST00000461221 PPP1R16BQ96T49 567 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 GREM2Q9H772 168 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 AFF4Q9UHB7 1163 aaKnown RBP9.53□□□□□ -0.88
BRCA1-205ENST00000461221 M0QYV0 167 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 CSPG5O95196 566 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 KRT14P02533 472 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 HMOX2P30519 316 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 CAPZA2P47755 286 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 DCAF4L1Q3SXM0 396 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 CEP78Q5JTW2 689 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 DCUN1D1Q96GG9 259 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 FOPNLQ96NB1 174 aa9.53□□□□□ -0.88
BRCA1-205ENST00000461221 H2AFY2Q9P0M6 372 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-205ENST00000461221 GUCA1CO95843 209 aa9.52□□□□□ -0.88
BRCA1-205ENST00000461221 PRELPP51888 382 aa9.52□□□□□ -0.88
BRCA1-205ENST00000461221 UBE3AQ05086 875 aa9.52□□□□□ -0.88
BRCA1-205ENST00000461221 GTF2H3Q13889 308 aa9.52□□□□□ -0.88
BRCA1-205ENST00000461221 UBE2SQ16763 222 aa9.52□□□□□ -0.88
BRCA1-205ENST00000461221 KYAT1Q16773 422 aa9.52□□□□□ -0.88
BRCA1-205ENST00000461221 FBXO38Q6PIJ6 1188 aa9.52□□□□□ -0.88
BRCA1-205ENST00000461221 ENOSF1Q7L5Y1 443 aa9.52□□□□□ -0.88
BRCA1-205ENST00000461221 ARMC2Q8NEN0 867 aa9.52□□□□□ -0.88
BRCA1-205ENST00000461221 CMTM5Q96DZ9 223 aa9.52□□□□□ -0.88
BRCA1-205ENST00000461221 PLEKHA8Q96JA3 519 aa9.52□□□□□ -0.88
BRCA1-205ENST00000461221 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.52□□□□□ -0.886e-6■■□□□ 12.9
BRCA1-205ENST00000461221 NUP85Q9BW27 656 aa9.52□□□□□ -0.88
BRCA1-205ENST00000461221 NDEL1Q9GZM8 345 aa9.52□□□□□ -0.88
BRCA1-205ENST00000461221 FBXO40Q9UH90 709 aa9.52□□□□□ -0.88
BRCA1-205ENST00000461221 AURKCQ9UQB9 309 aa9.52□□□□□ -0.88
BRCA1-205ENST00000461221 LGALS16A8MUM7 142 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 GOLGA8RI6L899 631 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 BBOX1O75936 387 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 GGCXP38435 758 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 DNAL1Q4LDG9 190 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 CENPPQ6IPU0 288 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 SARM1Q6SZW1 724 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 RHOT1Q8IXI2 618 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 AFG1LQ8WV93 481 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 FAM167BQ9BTA0 163 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 OSBPL10Q9BXB5 764 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 FAM49AQ9H0Q0 323 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-205ENST00000461221 BHMT2Q9H2M3 363 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 SLC24A3Q9HC58 644 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 PFASO15067 1338 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 AP3M2P53677 418 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 BCAR1P56945 870 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 GPS1Q13098 491 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 ZNF235Q14590 738 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 CNGA3Q16281 694 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 SLC27A3Q5K4L6 730 aa9.52□□□□□ -0.89
BRCA1-205ENST00000461221 SEPT3Q9UH03 358 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms