RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 VN1R3Q9BXE9 311 aa16.43■□□□□ 0.22
SMPD4-216ENST00000461187 GBP3Q9H0R5 595 aa16.43■□□□□ 0.22
SMPD4-216ENST00000461187 BMP2KQ9NSY1 1161 aaPredicted RBP16.43■□□□□ 0.22
SMPD4-216ENST00000461187 ORC3Q9UBD5 711 aaPredicted RBP16.43■□□□□ 0.22
SMPD4-216ENST00000461187 NR2E1Q9Y466 385 aa16.43■□□□□ 0.22
SMPD4-216ENST00000461187 USP34Q70CQ2 3546 aa16.42■□□□□ 0.22
SMPD4-216ENST00000461187 GAS2O43903 313 aaKnown RBP16.42■□□□□ 0.22
SMPD4-216ENST00000461187 DDHD2O94830 711 aa16.42■□□□□ 0.22
SMPD4-216ENST00000461187 FDPSP14324 419 aaKnown RBP16.42■□□□□ 0.22
SMPD4-216ENST00000461187 EPCAMP16422 314 aa16.42■□□□□ 0.22
SMPD4-216ENST00000461187 AFF1P51825 1210 aaKnown RBP16.42■□□□□ 0.22
SMPD4-216ENST00000461187 NR5A1Q13285 461 aa16.42■□□□□ 0.22
SMPD4-216ENST00000461187 GIT2Q14161 759 aa16.42■□□□□ 0.22
SMPD4-216ENST00000461187 CTTNQ14247 550 aaKnown RBP16.42■□□□□ 0.22
SMPD4-216ENST00000461187 EMC2Q15006 297 aa16.42■□□□□ 0.22
SMPD4-216ENST00000461187 UBXN11Q5T124 520 aa16.42■□□□□ 0.22
SMPD4-216ENST00000461187 OTUD6AQ7L8S5 288 aa16.42■□□□□ 0.22
SMPD4-216ENST00000461187 FERMT3Q86UX7 667 aa16.42■□□□□ 0.22
SMPD4-216ENST00000461187 SUGP1Q8IWZ8 645 aaKnown RBP16.42■□□□□ 0.22
SMPD4-216ENST00000461187 C12orf76Q8N812 135 aaPredicted RBP16.42■□□□□ 0.22
SMPD4-216ENST00000461187 SLC22A17Q8WUG5 538 aa16.42■□□□□ 0.22
SMPD4-216ENST00000461187 TCP11Q8WWU5 503 aa16.42■□□□□ 0.22
SMPD4-216ENST00000461187 TNFRSF25Q93038 417 aa16.42■□□□□ 0.22
SMPD4-216ENST00000461187 NECTIN4Q96NY8 510 aa16.42■□□□□ 0.22
SMPD4-216ENST00000461187 TSHZ2Q9NRE2 1034 aa16.42■□□□□ 0.22
SMPD4-216ENST00000461187 C2CD4DB7Z1M9 353 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 ASAP2O43150 1006 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 MARCH6O60337 910 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 WEE2P0C1S8 567 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 MTHFRP42898 656 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 AK2P54819 239 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 CYP4A11Q02928 519 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 XKR9Q5GH70 373 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 RARS2Q5T160 578 aaKnown RBP16.41■□□□□ 0.22
SMPD4-216ENST00000461187 KANK3Q6NY19 840 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 SLFN12Q8IYM2 578 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 RNF149Q8NC42 400 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 URGCPQ8TCY9 931 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 WASF1Q92558 559 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 ZSWIM4Q9H7M6 989 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 RSAD1Q9HA92 442 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 DZANK1Q9NVP4 752 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 CNTNAP2Q9UHC6 1331 aa16.41■□□□□ 0.22
SMPD4-216ENST00000461187 SLITRK3O94933 977 aa16.4■□□□□ 0.22
SMPD4-216ENST00000461187 BAG4O95429 457 aaKnown RBP16.4■□□□□ 0.22
SMPD4-216ENST00000461187 NCLP19338 710 aaKnown RBP16.4■□□□□ 0.22
SMPD4-216ENST00000461187 KRT2P35908 639 aa16.4■□□□□ 0.22
SMPD4-216ENST00000461187 ANAPC15P60006 121 aa16.4■□□□□ 0.22
SMPD4-216ENST00000461187 PTPN14Q15678 1187 aa16.4■□□□□ 0.22
SMPD4-216ENST00000461187 KIAA1841Q6NSI8 718 aa16.4■□□□□ 0.22
SMPD4-216ENST00000461187 TMEM87AQ8NBN3 555 aa16.4■□□□□ 0.22
SMPD4-216ENST00000461187 KREMEN2Q8NCW0 462 aa16.4■□□□□ 0.22
SMPD4-216ENST00000461187 RIPOR3Q96MK2 946 aa16.4■□□□□ 0.22
SMPD4-216ENST00000461187 MTRQ99707 1265 aa16.4■□□□□ 0.22
SMPD4-216ENST00000461187 XPNPEP1Q9NQW7 623 aa16.4■□□□□ 0.22
SMPD4-216ENST00000461187 VWA8A3KMH1 1905 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 MYH11P35749 1972 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 LARGE1O95461 756 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 ALDH2P05091 517 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 PTPN5P54829 565 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 VCPP55072 806 aaKnown RBP16.39■□□□□ 0.21
SMPD4-216ENST00000461187 TCF15Q12870 199 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 ANKRD1Q15327 319 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 ZBTB33Q86T24 672 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 TPH2Q8IWU9 490 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 NECAB1Q8N987 351 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 SMG8Q8ND04 991 aaKnown RBP16.39■□□□□ 0.21
SMPD4-216ENST00000461187 FEZF2Q8TBJ5 459 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 PHOX2BQ99453 314 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 PRRX2Q99811 253 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 EIF2AK1Q9BQI3 630 aaKnown RBP16.39■□□□□ 0.21
SMPD4-216ENST00000461187 TMEM175Q9BSA9 504 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 KANSL3Q9P2N6 904 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 FAN1Q9Y2M0 1017 aa16.39■□□□□ 0.21
SMPD4-216ENST00000461187 NRP1O14786 923 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 TSPAN1O60635 241 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 LILRB3O75022 631 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 ERLIN2O94905 339 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 POMCP01189 267 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 PTENP60484 403 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 MXD4Q14582 209 aaPredicted RBP16.38■□□□□ 0.21
SMPD4-216ENST00000461187 ME3Q16798 604 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 ATAT1Q5SQI0 421 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 PPFIBP1Q86W92 1011 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 IFNLR1Q8IU57 520 aaPredicted RBP16.38■□□□□ 0.21
SMPD4-216ENST00000461187 CNNM3Q8NE01 707 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 GTF3C6Q969F1 213 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 KLHL5Q96PQ7 755 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 FAM193BQ96PV7 902 aaPredicted RBP16.38■□□□□ 0.21
SMPD4-216ENST00000461187 HSD17B14Q9BPX1 270 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 EIF2AQ9BY44 585 aaKnown RBP16.38■□□□□ 0.21
SMPD4-216ENST00000461187 BRMS1Q9HCU9 246 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 STK39Q9UEW8 545 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 PCDHA12Q9UN75 941 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 SORCS3Q9UPU3 1222 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 IPPQ9Y573 584 aa16.38■□□□□ 0.21
SMPD4-216ENST00000461187 CITO14578 2027 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 WNT7AO00755 349 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 INPPL1O15357 1258 aa16.37■□□□□ 0.21
SMPD4-216ENST00000461187 LYPLA2O95372 231 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms