RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 MEIS3P2A8K0S8 358 aa19.36■□□□□ 0.69
TOP3A-202ENST00000461127 SOD2P04179 222 aa19.36■□□□□ 0.69
TOP3A-202ENST00000461127 LAMP2P13473 410 aa19.36■□□□□ 0.69
TOP3A-202ENST00000461127 RTN1Q16799 776 aa19.36■□□□□ 0.69
TOP3A-202ENST00000461127 ZNF410Q86VK4 478 aa19.36■□□□□ 0.69
TOP3A-202ENST00000461127 HDAC7Q8WUI4 952 aa19.36■□□□□ 0.69
TOP3A-202ENST00000461127 PHKBQ93100 1093 aa19.36■□□□□ 0.69
TOP3A-202ENST00000461127 FDXACB1Q9BRP7 624 aaPredicted RBP19.36■□□□□ 0.69
TOP3A-202ENST00000461127 BCO2Q9BYV7 579 aa19.36■□□□□ 0.69
TOP3A-202ENST00000461127 FOXQ1Q9C009 403 aa19.36■□□□□ 0.69
TOP3A-202ENST00000461127 CDV3Q9UKY7 258 aaKnown RBP19.36■□□□□ 0.69
TOP3A-202ENST00000461127 PRR5-ARHGAP8B1AHC4 643 aa19.35■□□□□ 0.69
TOP3A-202ENST00000461127 TEX28O15482 410 aa19.35■□□□□ 0.69
TOP3A-202ENST00000461127 LAMTOR5O43504 91 aa19.35■□□□□ 0.69
TOP3A-202ENST00000461127 RFPL2O75678 378 aa19.35■□□□□ 0.69
TOP3A-202ENST00000461127 SFNP31947 248 aa19.35■□□□□ 0.69
TOP3A-202ENST00000461127 ARHGAP8P85298 464 aa19.35■□□□□ 0.69
TOP3A-202ENST00000461127 APOA5Q6Q788 366 aa19.35■□□□□ 0.69
TOP3A-202ENST00000461127 GET4Q7L5D6 327 aaPredicted RBP19.35■□□□□ 0.69
TOP3A-202ENST00000461127 ATRIPQ8WXE1 791 aa19.35■□□□□ 0.69
TOP3A-202ENST00000461127 HERC2P3Q9BVR0 1158 aa19.35■□□□□ 0.69
TOP3A-202ENST00000461127 PLEKHA4Q9H4M7 779 aa19.35■□□□□ 0.69
TOP3A-202ENST00000461127 RSAD1Q9HA92 442 aa19.35■□□□□ 0.69
TOP3A-202ENST00000461127 SPATA6Q9NWH7 488 aaPredicted RBP19.35■□□□□ 0.69
TOP3A-202ENST00000461127 FBXO4Q9UKT5 387 aa19.35■□□□□ 0.69
TOP3A-202ENST00000461127 PCDHB2Q9Y5E7 798 aa19.35■□□□□ 0.69
TOP3A-202ENST00000461127 CNTNAP2Q9UHC6 1331 aa19.34■□□□□ 0.69
TOP3A-202ENST00000461127 MIA3Q5JRA6 1907 aa19.34■□□□□ 0.69
TOP3A-202ENST00000461127 POTEMA6NI47 508 aa19.34■□□□□ 0.69
TOP3A-202ENST00000461127 NRP1O14786 923 aa19.34■□□□□ 0.69
TOP3A-202ENST00000461127 B4GALT3O60512 393 aa19.34■□□□□ 0.69
TOP3A-202ENST00000461127 DDHD2O94830 711 aa19.34■□□□□ 0.69
TOP3A-202ENST00000461127 GLUD2P49448 558 aa19.34■□□□□ 0.69
TOP3A-202ENST00000461127 ATXN1P54253 815 aaKnown RBP19.34■□□□□ 0.69
TOP3A-202ENST00000461127 STARD6P59095 220 aa19.34■□□□□ 0.69
TOP3A-202ENST00000461127 LMNB2Q03252 620 aa19.34■□□□□ 0.69
TOP3A-202ENST00000461127 DRP2Q13474 957 aa19.34■□□□□ 0.69
TOP3A-202ENST00000461127 HTR4Q13639 388 aa19.34■□□□□ 0.69
TOP3A-202ENST00000461127 POTEGQ6S5H5 508 aa19.34■□□□□ 0.69
TOP3A-202ENST00000461127 RHPN2Q8IUC4 686 aa19.34■□□□□ 0.69
TOP3A-202ENST00000461127 REXO1Q8N1G1 1221 aaKnown RBP19.34■□□□□ 0.69
TOP3A-202ENST00000461127 SEPT9Q9UHD8 586 aaPredicted RBP19.34■□□□□ 0.69
TOP3A-202ENST00000461127 PCDHGA2Q9Y5H1 932 aa19.34■□□□□ 0.69
TOP3A-202ENST00000461127 ZFP37Q9Y6Q3 630 aaPredicted RBP19.34■□□□□ 0.69
TOP3A-202ENST00000461127 CACNA1GO43497 2377 aa19.33■□□□□ 0.69
TOP3A-202ENST00000461127 ANHXE9PGG2 379 aa19.33■□□□□ 0.68
TOP3A-202ENST00000461127 ZBTB43O43298 467 aa19.33■□□□□ 0.68
TOP3A-202ENST00000461127 CHMP2AO43633 222 aa19.33■□□□□ 0.68
TOP3A-202ENST00000461127 MYBP10242 640 aa19.33■□□□□ 0.68
TOP3A-202ENST00000461127 GLULP15104 373 aa19.33■□□□□ 0.68
TOP3A-202ENST00000461127 JAK3P52333 1124 aa19.33■□□□□ 0.68
TOP3A-202ENST00000461127 FUT2Q10981 343 aa19.33■□□□□ 0.68
TOP3A-202ENST00000461127 TARBP2Q15633 366 aaKnown RBP19.33■□□□□ 0.68
TOP3A-202ENST00000461127 MTERF2Q49AM1 385 aa19.33■□□□□ 0.68
TOP3A-202ENST00000461127 AGMOQ6ZNB7 445 aa19.33■□□□□ 0.68
TOP3A-202ENST00000461127 CCDC12Q8WUD4 166 aaPredicted RBP19.33■□□□□ 0.68
TOP3A-202ENST00000461127 C6orf50Q9HD87 102 aa19.33■□□□□ 0.68
TOP3A-202ENST00000461127 ZDHHC7Q9NXF8 308 aa19.33■□□□□ 0.68
TOP3A-202ENST00000461127 SUCLA2Q9P2R7 463 aaPredicted RBP19.33■□□□□ 0.68
TOP3A-202ENST00000461127 PRG3Q9Y2Y8 225 aaPredicted RBP19.33■□□□□ 0.68
TOP3A-202ENST00000461127 NUMBLQ9Y6R0 609 aa19.33■□□□□ 0.68
TOP3A-202ENST00000461127 KANSL1LA0AUZ9 987 aa19.32■□□□□ 0.68
TOP3A-202ENST00000461127 SLC27A2O14975 620 aa19.32■□□□□ 0.68
TOP3A-202ENST00000461127 GAS7O60861 476 aa19.32■□□□□ 0.68
TOP3A-202ENST00000461127 C1RP00736 705 aa19.32■□□□□ 0.68
TOP3A-202ENST00000461127 POMCP01189 267 aa19.32■□□□□ 0.68
TOP3A-202ENST00000461127 UGCGQ16739 394 aa19.32■□□□□ 0.68
TOP3A-202ENST00000461127 XKR3Q5GH77 459 aa19.32■□□□□ 0.68
TOP3A-202ENST00000461127 MAML2Q8IZL2 1156 aaPredicted RBP19.32■□□□□ 0.68
TOP3A-202ENST00000461127 ZNF707Q96C28 371 aaPredicted RBP19.32■□□□□ 0.68
TOP3A-202ENST00000461127 NLRP4Q96MN2 994 aa19.32■□□□□ 0.68
TOP3A-202ENST00000461127 RIT2Q99578 217 aa19.32■□□□□ 0.68
TOP3A-202ENST00000461127 NT5C3AQ9H0P0 336 aa19.32■□□□□ 0.68
TOP3A-202ENST00000461127 RXFP1Q9HBX9 757 aa19.32■□□□□ 0.68
TOP3A-202ENST00000461127 AGPAT5Q9NUQ2 364 aa19.32■□□□□ 0.68
TOP3A-202ENST00000461127 ESYT2A0FGR8 921 aa19.31■□□□□ 0.68
TOP3A-202ENST00000461127 GAS2O43903 313 aaKnown RBP19.31■□□□□ 0.68
TOP3A-202ENST00000461127 NR1I2O75469 434 aa19.31■□□□□ 0.68
TOP3A-202ENST00000461127 SPATA31D3P0C874 917 aa19.31■□□□□ 0.68
TOP3A-202ENST00000461127 CIITAP33076 1130 aa19.31■□□□□ 0.68
TOP3A-202ENST00000461127 MAGEA9P43362 315 aa19.31■□□□□ 0.68
TOP3A-202ENST00000461127 COL9A3Q14050 684 aaPredicted RBP19.31■□□□□ 0.68
TOP3A-202ENST00000461127 ST3GAL2Q16842 350 aa19.31■□□□□ 0.68
TOP3A-202ENST00000461127 SPATA31D4Q6ZUB0 917 aa19.31■□□□□ 0.68
TOP3A-202ENST00000461127 MRPL10Q7Z7H8 261 aaKnown RBP19.31■□□□□ 0.68
TOP3A-202ENST00000461127 JPH2Q9BR39 696 aaPredicted RBP19.31■□□□□ 0.68
TOP3A-202ENST00000461127 RTKNQ9BST9 563 aa19.31■□□□□ 0.68
TOP3A-202ENST00000461127 TEKT3Q9BXF9 490 aa19.31■□□□□ 0.68
TOP3A-202ENST00000461127 NIFKQ9BYG3 293 aaKnown RBP19.31■□□□□ 0.68
TOP3A-202ENST00000461127 PRKD2Q9BZL6 878 aa19.31■□□□□ 0.68
TOP3A-202ENST00000461127 ZMYND12Q9H0C1 365 aa19.31■□□□□ 0.68
TOP3A-202ENST00000461127 UBN1Q9NPG3 1134 aa19.31■□□□□ 0.68
TOP3A-202ENST00000461127 MAP1BP46821 2468 aaKnown RBP19.3■□□□□ 0.68
TOP3A-202ENST00000461127 IGKV6-21A0A0C4DH24 114 aa19.3■□□□□ 0.68
TOP3A-202ENST00000461127 GOLGA8AA7E2F4 631 aa19.3■□□□□ 0.68
TOP3A-202ENST00000461127 GOLGA8BA8MQT2 603 aa19.3■□□□□ 0.68
TOP3A-202ENST00000461127 LRRN2O75325 713 aa19.3■□□□□ 0.68
TOP3A-202ENST00000461127 PAPLNO95428 1278 aa19.3■□□□□ 0.68
TOP3A-202ENST00000461127 GNA11P29992 359 aa19.3■□□□□ 0.68
TOP3A-202ENST00000461127 OR1G1P47890 313 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms