RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 TTLL13PA6NNM8 815 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 ACKR2O00590 384 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 POLR2DO15514 142 aaKnown RBP13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 B4GALT5O43286 388 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 ZNF623O75123 536 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 UPP2O95045 317 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 CA3P07451 260 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 LINC00271P0C7V0 271 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 PFKFB1P16118 471 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 ARF4P18085 180 aaPredicted RBP13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 NCKAP1LP55160 1127 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 FAM117BQ6P1L5 589 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 CNNM4Q6P4Q7 775 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 DDX12PQ92771 950 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 DHX58Q96C10 678 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 NKX2-4Q9H2Z4 354 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 TMEM134Q9H6X4 195 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 PARVGQ9HBI0 331 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 PHLPP2Q6ZVD8 1323 aa13.38□□□□□ -0.27
ERGIC3-211ENST00000461043 A0A1B0GVL5 298 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 LINC01553A4QN01 128 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 ACTN4O43707 911 aaKnown RBP13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 ERLIN2O94905 339 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 EOMESO95936 686 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 PRKCBP05771 671 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 STAG3L1P0CL83 205 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 MAPTP10636 758 aaKnown RBP13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 TAP1Q03518 808 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 MAPK6Q16659 721 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 NT5DC1Q5TFE4 455 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 TWF2Q6IBS0 349 aaKnown RBP13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 NOTUMQ6P988 496 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 MRPL10Q7Z7H8 261 aaKnown RBP13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 CPB2Q96IY4 423 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 IPO9Q96P70 1041 aaKnown RBP13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 PYM1Q9BRP8 204 aaKnown RBP13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 ZBED2Q9BTP6 218 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 MAGEF1Q9HAY2 307 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 KMT5AQ9NQR1 393 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 FAM105AQ9NUU6 356 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 RNF216Q9NWF9 866 aaPredicted RBP13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 LARSQ9P2J5 1176 aaKnown RBP13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 KCNG1Q9UIX4 513 aa13.37□□□□□ -0.27
ERGIC3-211ENST00000461043 CCDC169A6NNP5 214 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 SLC16A4O15374 487 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 FAM13AO94988 1023 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 KRT18P05783 430 aaKnown RBP13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 SLFN14P0C7P3 912 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 SKIP12755 728 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 SCP2P22307 547 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 RAB27AP51159 221 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 NDUFA8P51970 172 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 PPP2R2DQ66LE6 453 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 DYMQ7RTS9 669 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 SPRED2Q7Z698 418 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 SMG8Q8ND04 991 aaKnown RBP13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 YME1L1Q96TA2 773 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 C7orf25Q9BPX7 421 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 EIF2AQ9BY44 585 aaKnown RBP13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 TRIM9Q9C026 710 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 SEMA6BQ9H3T3 888 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 GOLPH3LQ9H4A5 285 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 ST6GALNAC4Q9H4F1 302 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 PDZD7Q9H5P4 517 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 PCDHB7Q9Y5E2 793 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 PCDHB2Q9Y5E7 798 aa13.36□□□□□ -0.27
ERGIC3-211ENST00000461043 MEIS3P2A8K0S8 358 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 K7ERI5 159 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 TBCAO75347 108 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 FGFR1P11362 822 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 GATMP50440 423 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 SMTNP53814 917 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 NCBP1Q09161 790 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 PRPF4BQ13523 1007 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 LONRF3Q496Y0 759 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 CLLU1OSQ5K130 101 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 ZNF697Q5TEC3 545 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 SLC27A1Q6PCB7 646 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 Q7L0L9 218 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 CMTR2Q8IYT2 770 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 MYCT1Q8N699 235 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 FSIP1Q8NA03 581 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 TMEM87AQ8NBN3 555 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 MRPS27Q92552 414 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 STAMQ92783 540 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 CLP1Q92989 425 aaKnown RBP13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 CASD1Q96PB1 797 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 STRA6Q9BX79 667 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 LRRC27Q9C0I9 530 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 ZNF576Q9H609 170 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 SLC28A3Q9HAS3 691 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 PTPRHQ9HD43 1115 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 LRFN2Q9ULH4 789 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 USP20Q9Y2K6 914 aa13.35□□□□□ -0.27
ERGIC3-211ENST00000461043 H0YCG3 227 aa13.34□□□□□ -0.27
ERGIC3-211ENST00000461043 ABLIM1O14639 778 aa13.34□□□□□ -0.27
ERGIC3-211ENST00000461043 N4BP3O15049 544 aa13.34□□□□□ -0.27
ERGIC3-211ENST00000461043 INPPL1O15357 1258 aa13.34□□□□□ -0.27
ERGIC3-211ENST00000461043 HOXA2O43364 376 aa13.34□□□□□ -0.27
ERGIC3-211ENST00000461043 TRAK2O60296 914 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms