RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ACAD9Q9H845 621 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 RBM12Q9NTZ6 932 aaKnown RBP15.77■□□□□ 0.11
PTPRU-205ENST00000460170 HSPBP1Q9NZL4 362 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 GUCY2CP25092 1073 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 PKN1Q16512 942 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 RAPH1Q70E73 1250 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 NLRP14Q86W24 1093 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 SLC35G2Q8TBE7 412 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 TUBB6Q9BUF5 446 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 RBAKQ9NYW8 714 aaPredicted RBP15.77■□□□□ 0.11
PTPRU-205ENST00000460170 AGO2Q9UKV8 859 aaKnown RBP15.77■□□□□ 0.11
PTPRU-205ENST00000460170 JCADQ9P266 1359 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 LUC7L3O95232 432 aaKnown RBP15.76■□□□□ 0.11
PTPRU-205ENST00000460170 SYN2Q92777 582 aaPredicted RBP15.76■□□□□ 0.11
PTPRU-205ENST00000460170 TTC25Q96NG3 672 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 MAPK13O15264 365 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 ZNF18P17022 549 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 BEND6Q5SZJ8 279 aaPredicted RBP15.76■□□□□ 0.11
PTPRU-205ENST00000460170 ILDR1Q86SU0 546 aaPredicted RBP15.76■□□□□ 0.11
PTPRU-205ENST00000460170 CFAP36Q96G28 342 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 DNAJC7Q99615 494 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 UBE4BO95155 1302 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 SLC37A4O43826 429 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 SRGAP2BP0DMP2 458 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 GRB10Q13322 594 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 CDKAL1Q5VV42 579 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 RSRC2Q7L4I2 434 aaKnown RBP15.76■□□□□ 0.11
PTPRU-205ENST00000460170 TBC1D1Q86TI0 1168 aaPredicted RBP15.76■□□□□ 0.11
PTPRU-205ENST00000460170 RSPH3Q86UC2 560 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 KCTD17Q8N5Z5 321 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 HNRNPLLQ8WVV9 542 aaKnown RBP15.76■□□□□ 0.11
PTPRU-205ENST00000460170 GBP5Q96PP8 586 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 IP6K2Q9UHH9 426 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 SALL1Q9NSC2 1324 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 CHRNA5P30532 468 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 SIX6OS1Q8N1H7 587 aa15.76■□□□□ 0.11
PTPRU-205ENST00000460170 TTC7AQ9ULT0 858 aaPredicted RBP15.76■□□□□ 0.11
PTPRU-205ENST00000460170 KRT37O76014 449 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 RPSAP08865 295 aaKnown RBP15.75■□□□□ 0.11
PTPRU-205ENST00000460170 ARMCX2Q7L311 632 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 PCGF5Q86SE9 256 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 PDCD7Q8N8D1 485 aaKnown RBP15.75■□□□□ 0.11
PTPRU-205ENST00000460170 FAF2Q96CS3 445 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 SH2D3AQ9BRG2 576 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 TFR2Q9UP52 801 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 GPC3P51654 580 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 PPP6R3Q5H9R7 873 aaPredicted RBP15.75■□□□□ 0.11
PTPRU-205ENST00000460170 TTI2Q6NXR4 508 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 OR6B3Q8NGW1 331 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 C1orf54Q8WWF1 131 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 FAM193BQ96PV7 902 aaPredicted RBP15.75■□□□□ 0.11
PTPRU-205ENST00000460170 ASNSD1Q9NWL6 643 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 GPC4O75487 556 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 GSTA1P08263 222 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 GSTA2P09210 222 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 SCP2P22307 547 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 HDLBPQ00341 1268 aaKnown RBP15.75■□□□□ 0.11
PTPRU-205ENST00000460170 TNFAIP2Q03169 654 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 CYFIP1Q7L576 1253 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 NCAPGQ9BPX3 1015 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 MKNK1Q9BUB5 465 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 C2orf40Q9H1Z8 148 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 CCDC68Q9H2F9 335 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 RPAP3Q9H6T3 665 aaPredicted RBP15.75■□□□□ 0.11
PTPRU-205ENST00000460170 SMYD2Q9NRG4 433 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 SMARCAL1Q9NZC9 954 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 SLC9A2Q9UBY0 812 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 HPCAL4Q9UM19 191 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 BRAFP15056 766 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 KLRC1P26715 233 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 PHKA2P46019 1235 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 Q3C1V9 767 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 ZC2HC1CQ53FD0 456 aaPredicted RBP15.75■□□□□ 0.11
PTPRU-205ENST00000460170 CATSPER4Q7RTX7 472 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 IL17RAQ96F46 866 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 KLC2Q9H0B6 622 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 VCPKMTQ9H867 229 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 GPR162Q16538 588 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 BZW1Q7L1Q6 419 aaKnown RBP15.75■□□□□ 0.11
PTPRU-205ENST00000460170 EPM2AIP1Q7L775 607 aaPredicted RBP15.75■□□□□ 0.11
PTPRU-205ENST00000460170 CATSPER3Q86XQ3 398 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 MMGT1Q8N4V1 131 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 ANKS1AQ92625 1134 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 SNF8Q96H20 258 aa15.75■□□□□ 0.11
PTPRU-205ENST00000460170 MRPL4Q9BYD3 311 aaKnown RBP15.75■□□□□ 0.11
PTPRU-205ENST00000460170 EIF3DO15371 548 aaKnown RBP eCLIP15.74■□□□□ 0.11
PTPRU-205ENST00000460170 TTI1O43156 1089 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 KIAA1755Q5JYT7 1200 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 KLHDC7AQ5VTJ3 777 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 FAM47EQ6ZV65 393 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 ZNF526Q8TF50 670 aaPredicted RBP15.74■□□□□ 0.11
PTPRU-205ENST00000460170 LPAR1Q92633 364 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.74■□□□□ 0.11
PTPRU-205ENST00000460170 IPO11Q9UI26 975 aaKnown RBP15.74■□□□□ 0.11
PTPRU-205ENST00000460170 CASQ2O14958 399 aaPredicted RBP15.74■□□□□ 0.11
PTPRU-205ENST00000460170 WDR46O15213 610 aaKnown RBP15.74■□□□□ 0.11
PTPRU-205ENST00000460170 PPP1R37O75864 691 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 GUCY1A3Q02108 690 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 ZNF449Q6P9G9 518 aa15.74■□□□□ 0.11
PTPRU-205ENST00000460170 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms