RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 RBM10P98175 930 aaKnown RBP17.29■□□□□ 0.36
SDF4-204ENST00000459994 SPOUT1Q5T280 376 aaKnown RBP17.29■□□□□ 0.36
SDF4-204ENST00000459994 C4orf19Q8IY42 314 aa17.29■□□□□ 0.36
SDF4-204ENST00000459994 LPPQ93052 612 aa17.29■□□□□ 0.36
SDF4-204ENST00000459994 CALML4Q96GE6 196 aa17.29■□□□□ 0.36
SDF4-204ENST00000459994 CEP170P1Q96L14 293 aa17.29■□□□□ 0.36
SDF4-204ENST00000459994 PYM1Q9BRP8 204 aaKnown RBP17.29■□□□□ 0.36
SDF4-204ENST00000459994 EPHX3Q9H6B9 360 aa17.29■□□□□ 0.36
SDF4-204ENST00000459994 DHX33Q9H6R0 707 aaKnown RBP17.29■□□□□ 0.36
SDF4-204ENST00000459994 MINDY3Q9H8M7 445 aa17.29■□□□□ 0.36
SDF4-204ENST00000459994 IFT122Q9HBG6 1241 aa17.29■□□□□ 0.36
SDF4-204ENST00000459994 CCDC39Q9UFE4 941 aa17.29■□□□□ 0.36
SDF4-204ENST00000459994 KCNH3Q9ULD8 1083 aa17.29■□□□□ 0.36
SDF4-204ENST00000459994 A0A1B0GVL5 298 aa17.28■□□□□ 0.36
SDF4-204ENST00000459994 DKC1O60832 514 aaKnown RBP eCLIP17.28■□□□□ 0.36
SDF4-204ENST00000459994 MED24O75448 989 aa17.28■□□□□ 0.36
SDF4-204ENST00000459994 LYPLA2O95372 231 aa17.28■□□□□ 0.36
SDF4-204ENST00000459994 PFKFB1P16118 471 aa17.28■□□□□ 0.36
SDF4-204ENST00000459994 ZSCAN20P17040 1043 aaPredicted RBP17.28■□□□□ 0.36
SDF4-204ENST00000459994 YWHABP31946 246 aaKnown RBP17.28■□□□□ 0.36
SDF4-204ENST00000459994 ERVFC1P60507 584 aa17.28■□□□□ 0.36
SDF4-204ENST00000459994 CCDC73Q6ZRK6 1079 aa17.28■□□□□ 0.36
SDF4-204ENST00000459994 RBM23Q86U06 439 aaKnown RBP17.28■□□□□ 0.36
SDF4-204ENST00000459994 CATSPER3Q86XQ3 398 aa17.28■□□□□ 0.36
SDF4-204ENST00000459994 FAM178BQ8IXR5 827 aa17.28■□□□□ 0.36
SDF4-204ENST00000459994 HELQQ8TDG4 1101 aa17.28■□□□□ 0.36
SDF4-204ENST00000459994 PNMA5Q96PV4 448 aa17.28■□□□□ 0.36
SDF4-204ENST00000459994 GCOM2Q9BZD3 368 aaPredicted RBP17.28■□□□□ 0.36
SDF4-204ENST00000459994 TMEM117Q9H0C3 514 aa17.28■□□□□ 0.36
SDF4-204ENST00000459994 NT5C3AQ9H0P0 336 aa17.28■□□□□ 0.36
SDF4-204ENST00000459994 XPNPEP1Q9NQW7 623 aa17.28■□□□□ 0.36
SDF4-204ENST00000459994 RAPGEFL1Q9UHV5 662 aa17.28■□□□□ 0.36
SDF4-204ENST00000459994 A0A0U1RQF3 1178 aa17.27■□□□□ 0.36
SDF4-204ENST00000459994 FGF18O76093 207 aa17.27■□□□□ 0.36
SDF4-204ENST00000459994 GLP2RO95838 553 aa17.27■□□□□ 0.36
SDF4-204ENST00000459994 NDUFA8P51970 172 aa17.27■□□□□ 0.36
SDF4-204ENST00000459994 FAM160A1Q05DH4 1040 aa17.27■□□□□ 0.36
SDF4-204ENST00000459994 KARSQ15046 597 aaKnown RBP17.27■□□□□ 0.36
SDF4-204ENST00000459994 TMEM119Q4V9L6 283 aa17.27■□□□□ 0.36
SDF4-204ENST00000459994 NAALADL2Q58DX5 795 aa17.27■□□□□ 0.36
SDF4-204ENST00000459994 TPH2Q8IWU9 490 aa17.27■□□□□ 0.36
SDF4-204ENST00000459994 ENGASEQ8NFI3 743 aa17.27■□□□□ 0.36
SDF4-204ENST00000459994 PRPF31Q8WWY3 499 aaKnown RBP17.27■□□□□ 0.36
SDF4-204ENST00000459994 CDK5RAP3Q96JB5 506 aa17.27■□□□□ 0.36
SDF4-204ENST00000459994 GOLPH3LQ9H4A5 285 aa17.27■□□□□ 0.36
SDF4-204ENST00000459994 ZSWIM4Q9H7M6 989 aa17.27■□□□□ 0.36
SDF4-204ENST00000459994 COL4A3BPQ9Y5P4 624 aa17.27■□□□□ 0.36
SDF4-204ENST00000459994 MBD3O95983 291 aa17.26■□□□□ 0.35
SDF4-204ENST00000459994 SRGAP2CP0DJJ0 459 aa17.26■□□□□ 0.35
SDF4-204ENST00000459994 XRCC6P12956 609 aaKnown RBP eCLIP17.26■□□□□ 0.35
SDF4-204ENST00000459994 SYKP43405 635 aa17.26■□□□□ 0.35
SDF4-204ENST00000459994 NRIP1P48552 1158 aa17.26■□□□□ 0.35
SDF4-204ENST00000459994 DNM2P50570 870 aa17.26■□□□□ 0.35
SDF4-204ENST00000459994 POLGP54098 1239 aaPredicted RBP17.26■□□□□ 0.35
SDF4-204ENST00000459994 ADAM15Q13444 863 aa17.26■□□□□ 0.35
SDF4-204ENST00000459994 EMC2Q15006 297 aa17.26■□□□□ 0.35
SDF4-204ENST00000459994 NFKBIBQ15653 356 aa17.26■□□□□ 0.35
SDF4-204ENST00000459994 ECM1Q16610 540 aa17.26■□□□□ 0.35
SDF4-204ENST00000459994 XKR9Q5GH70 373 aa17.26■□□□□ 0.35
SDF4-204ENST00000459994 ZNF410Q86VK4 478 aa17.26■□□□□ 0.35
SDF4-204ENST00000459994 THNSL1Q8IYQ7 743 aa17.26■□□□□ 0.35
SDF4-204ENST00000459994 FMR1NBQ8N0W7 255 aaPredicted RBP17.26■□□□□ 0.35
SDF4-204ENST00000459994 USP25Q9UHP3 1055 aa17.26■□□□□ 0.35
SDF4-204ENST00000459994 PIN4Q9Y237 131 aaKnown RBP17.26■□□□□ 0.35
SDF4-204ENST00000459994 A0A087X0B3 334 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 NT5C1B-RDH14C9J2C7 533 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 FSCN2O14926 492 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 PER2O15055 1255 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 B4GALT3O60512 393 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 LIG1P18858 919 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 PHKA2P46019 1235 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 LAMTOR4Q0VGL1 99 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 SNW1Q13573 536 aaKnown RBP17.25■□□□□ 0.35
SDF4-204ENST00000459994 E2F4Q16254 413 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 TPRNQ4KMQ1 711 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 RRAGBQ5VZM2 374 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 ZNF710Q8N1W2 664 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 IQUBQ8NA54 791 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 VN1R2Q8NFZ6 395 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 RASSF8Q8NHQ8 419 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 NACC1Q96RE7 527 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 CLEC1BQ9P126 229 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 STK17AQ9UEE5 414 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 KIAA1024Q9UPX6 916 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 PCDHB12Q9Y5F1 795 aa17.25■□□□□ 0.35
SDF4-204ENST00000459994 POLR2DO15514 142 aaKnown RBP17.24■□□□□ 0.35
SDF4-204ENST00000459994 MBTPS2O43462 519 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 ZNF202O95125 648 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 LAG3P18627 525 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 PLCG1P19174 1290 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 SFPQP23246 707 aaKnown RBP eCLIP17.24■□□□□ 0.35
SDF4-204ENST00000459994 RFC5P40937 340 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 ZRSR1Q15695 479 aaKnown RBP17.24■□□□□ 0.35
SDF4-204ENST00000459994 UBXN11Q5T124 520 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 TWF2Q6IBS0 349 aaKnown RBP17.24■□□□□ 0.35
SDF4-204ENST00000459994 KCNT2Q6UVM3 1135 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 FAM43BQ6ZT52 329 aaPredicted RBP17.24■□□□□ 0.35
SDF4-204ENST00000459994 CATSPER4Q7RTX7 472 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 PDILTQ8N807 584 aa17.24■□□□□ 0.35
SDF4-204ENST00000459994 ASAP3Q8TDY4 903 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms