RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 NMT2O60551 498 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 ZRANB2O95218 330 aaKnown RBP eCLIP10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 HNRNPCP07910 306 aaKnown RBP eCLIP10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 VIL1P09327 827 aaKnown RBP10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 CDC27P30260 824 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 ZBTB17Q13105 803 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 TC2NQ8N9U0 490 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 TRIM55Q9BYV6 548 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 GINM1Q9NU53 330 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 HOXA13P31271 388 aaPredicted RBP10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 PMS2P54278 862 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 TMPRSS15P98073 1019 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 RAPH1Q70E73 1250 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 TRMT10CQ7L0Y3 403 aaKnown RBP10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 AMIGO3Q86WK7 504 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 NME8Q8N427 588 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 GPRC5AQ8NFJ5 357 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 NEDD1Q8NHV4 660 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 DEPTORQ8TB45 409 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 DCAF4Q8WV16 495 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 SH3GL3Q99963 347 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 EPN3Q9H201 632 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 L2HGDHQ9H9P8 463 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 SAYSD1Q9NPB0 183 aa10.42□□□□□ -0.74
MSC-AS1-201ENST00000457356 DCTN3O75935 186 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 YARSP54577 528 aaKnown RBP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 MKRN4PQ13434 485 aaPredicted RBP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 TAF12Q16514 161 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 LRRC36Q1X8D7 754 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 KIF2BQ8N4N8 673 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 LPAR1Q92633 364 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 CDKL2Q92772 493 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 SGSM3Q96HU1 749 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 FAM161BQ96MY7 647 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 RMDN3Q96TC7 470 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 IL25Q9H293 177 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 AGPAT5Q9NUQ2 364 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 CPA4Q9UI42 421 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 PODXLO00592 558 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 HNRNPDLO14979 420 aaKnown RBP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 PRPF3O43395 683 aaKnown RBP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 LPXNO60711 386 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 STAM2O75886 525 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 DNAJC8O75937 253 aaPredicted RBP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 KITP10721 976 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 PLS3P13797 630 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 CARSP49589 748 aaKnown RBP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 MFAP3P55082 362 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 FCGRTP55899 365 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 C1orf146Q5VVC0 180 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 EPM2AIP1Q7L775 607 aaPredicted RBP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 RSPH3Q86UC2 560 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 PDIK1LQ8N165 341 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 ZNF513Q8N8E2 541 aaPredicted RBP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 CCDC124Q96CT7 223 aaKnown RBP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 CDHR1Q96JP9 859 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 NUDT12Q9BQG2 462 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 TEX13BQ9BXU2 312 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 ACAD9Q9H845 621 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 KIF9Q9HAQ2 790 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 EPS15L1Q9UBC2 864 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 SNX12Q9UMY4 172 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 FZD1Q9UP38 647 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 FAM205AQ6ZU69 1335 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 RASSF10A6NK89 507 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 GOLGA8MH3BSY2 632 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 POLR2BP30876 1174 aaKnown RBP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 RWDD2BP57060 319 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 RGMBQ6NW40 437 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 SLC30A9Q6PML9 568 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 DDX42Q86XP3 938 aaKnown RBP eCLIP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 SLFN12Q8IYM2 578 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 ZC3H15Q8WU90 426 aaKnown RBP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 HDAC11Q96DB2 347 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 TGS1Q96RS0 853 aaKnown RBP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 TUBB6Q9BUF5 446 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 ALG13Q9NP73 1137 aaKnown RBP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 PRDM5Q9NQX1 630 aaPredicted RBP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 ZFP69BQ9UJL9 534 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 STK24Q9Y6E0 443 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 LAD1O00515 517 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 SPAG7O75391 227 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 TOMM70O94826 608 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 CDC25CP30307 473 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 SPDYE2Q495Y8 402 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 RABGAP1LQ5R372 815 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 CYB5R4Q7L1T6 521 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 FAM83AQ86UY5 434 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 TRIM50Q86XT4 487 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 RFX6Q8HWS3 928 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 GABPB2Q8TAK5 448 aaPredicted RBP10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 TRIM17Q9Y577 477 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 PCDHB4Q9Y5E5 795 aa10.41□□□□□ -0.74
MSC-AS1-201ENST00000457356 ABCC6O95255 1503 aa10.4□□□□□ -0.74
MSC-AS1-201ENST00000457356 TCP11X1B4DZS4 312 aa10.4□□□□□ -0.74
MSC-AS1-201ENST00000457356 WDR46O15213 610 aaKnown RBP10.4□□□□□ -0.74
MSC-AS1-201ENST00000457356 TTC4O95801 387 aa10.4□□□□□ -0.74
MSC-AS1-201ENST00000457356 MYL1P05976 194 aa10.4□□□□□ -0.74
MSC-AS1-201ENST00000457356 PLA2G4BP0C869 781 aa10.4□□□□□ -0.74
MSC-AS1-201ENST00000457356 FDX1P10109 184 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms