RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 ALDH5A1P51649 535 aaPredicted RBP5.31□□□□□ -1.56
PCDH9-203ENST00000456367 CENPCQ03188 943 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 PPIDQ08752 370 aaKnown RBP5.31□□□□□ -1.56
PCDH9-203ENST00000456367 TFDP2Q14188 446 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 GIMAP8Q8ND71 665 aaPredicted RBP5.31□□□□□ -1.56
PCDH9-203ENST00000456367 ZNF398Q8TD17 642 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 C17orf50Q8WW18 174 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 CCDC127Q96BQ5 260 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 ZNF594Q96JF6 807 aaPredicted RBP5.31□□□□□ -1.56
PCDH9-203ENST00000456367 AIFM3Q96NN9 605 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 FRMD8Q9BZ67 464 aaPredicted RBP5.31□□□□□ -1.56
PCDH9-203ENST00000456367 KLC2Q9H0B6 622 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 PSTPIP2Q9H939 334 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 CYP26B1Q9NR63 512 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 DNAJC12Q9UKB3 198 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 UGGT1Q9NYU2 1555 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.31□□□□□ -1.56
PCDH9-203ENST00000456367 hCG_1642624A0A1W2PR95 340 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 DYTNA2CJ06 578 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 PPP1R3GB7ZBB8 358 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 KIF28PB7ZC32 967 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 USP17L12C9JPN9 530 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 USP17L21D6R901 530 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 RTN3O95197 1032 aaPredicted RBP5.31□□□□□ -1.56
PCDH9-203ENST00000456367 KRT16P08779 473 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 CCDC166P0CW27 439 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 CDC25AP30304 524 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 HIBADHP31937 336 aaKnown RBP5.31□□□□□ -1.56
PCDH9-203ENST00000456367 PPP2R5CQ13362 524 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 PFKFB3Q16875 520 aaPredicted RBP5.31□□□□□ -1.56
PCDH9-203ENST00000456367 NT5DC1Q5TFE4 455 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 RNF43Q68DV7 783 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 TRIM72Q6ZMU5 477 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 ENOSF1Q7L5Y1 443 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 NLRP9Q7RTR0 991 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 DGKHQ86XP1 1220 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 RFX6Q8HWS3 928 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 SCUBE1Q8IWY4 988 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 LRRN4CLQ8ND94 238 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 HIPK4Q8NE63 616 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 OR2W6PQ8NHA6 318 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 AGAP11Q8TF27 550 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 MS4A14Q96JA4 679 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 CNBD2Q96M20 576 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 BRIP1Q9BX63 1249 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 DDX56Q9NY93 547 aaKnown RBP5.31□□□□□ -1.56
PCDH9-203ENST00000456367 IPO11Q9UI26 975 aaKnown RBP5.31□□□□□ -1.56
PCDH9-203ENST00000456367 ZMYND8Q9ULU4 1186 aaPredicted RBP5.31□□□□□ -1.56
PCDH9-203ENST00000456367 PHTF1Q9UMS5 762 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 F8VZ95 297 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 PFDN6O15212 129 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 PLA2G4BP0C869 781 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 HSPA1AP0DMV8 641 aaKnown RBP5.31□□□□□ -1.56
PCDH9-203ENST00000456367 HSPA1BP0DMV9 641 aaKnown RBP5.31□□□□□ -1.56
PCDH9-203ENST00000456367 GJA8P48165 433 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 IGBP1P78318 339 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 KRT17Q04695 432 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 SLC29A2Q14542 456 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 KAZNQ674X7 775 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 LRRC74BQ6ZQY2 392 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 KRT28Q7Z3Y7 464 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 ZNF554Q86TJ5 538 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 TMPRSS6Q8IU80 811 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 RHOT1Q8IXI2 618 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 FBXL16Q8N461 479 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 STKLD1Q8NE28 680 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 SH3TC2Q8TF17 1288 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 GJA10Q969M2 543 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 PAWRQ96IZ0 340 aaKnown RBP5.31□□□□□ -1.56
PCDH9-203ENST00000456367 THTPAQ9BU02 230 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 LGR6Q9HBX8 967 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 NPHS2Q9NP85 383 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 TIMMDC1Q9NPL8 285 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 WHRNQ9P202 907 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 SH3GLB1Q9Y371 365 aa5.31□□□□□ -1.56
PCDH9-203ENST00000456367 OVOS2A0A0G2JMS6 1433 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 NCAPD2Q15021 1401 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 AREL1O15033 823 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 GAS7O60861 476 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 SRGAP2BP0DMP2 458 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 FGFR4P22455 802 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 SOX5P35711 763 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 PPARGP37231 505 aaPredicted RBP5.3□□□□□ -1.56
PCDH9-203ENST00000456367 MXI1P50539 228 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 ARHGDIAP52565 204 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 BASP1P80723 227 aaKnown RBP5.3□□□□□ -1.56
PCDH9-203ENST00000456367 MAPK7Q13164 816 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 MORF4L2Q15014 288 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 CYTH1Q15438 398 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 TTBK2Q6IQ55 1244 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 KIAA0825Q8IV33 1275 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.3□□□□□ -1.56
PCDH9-203ENST00000456367 GALNT15Q8N3T1 639 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 DEPDC1BQ8WUY9 529 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 EME1Q96AY2 570 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 CFAP36Q96G28 342 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 MPP4Q96JB8 637 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 PLGRKTQ9HBL7 147 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 CD209Q9NNX6 404 aa5.3□□□□□ -1.56
PCDH9-203ENST00000456367 MLXIPLQ9NP71 852 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms