RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 VPS52Q8N1B4 723 aa13.8□□□□□ -0.2
SMCR2-201ENST00000456090 MRPL43Q8N983 215 aaKnown RBP13.8□□□□□ -0.2
SMCR2-201ENST00000456090 URGCPQ8TCY9 931 aa13.8□□□□□ -0.2
SMCR2-201ENST00000456090 PIGOQ8TEQ8 1089 aa13.8□□□□□ -0.2
SMCR2-201ENST00000456090 LLPHQ9BRT6 129 aaKnown RBP13.8□□□□□ -0.2
SMCR2-201ENST00000456090 NRDE2Q9H7Z3 1164 aa13.8□□□□□ -0.2
SMCR2-201ENST00000456090 RSAD1Q9HA92 442 aa13.8□□□□□ -0.2
SMCR2-201ENST00000456090 DNAJB4Q9UDY4 337 aa13.8□□□□□ -0.2
SMCR2-201ENST00000456090 MUTYHQ9UIF7 546 aa13.8□□□□□ -0.2
SMCR2-201ENST00000456090 MYH11P35749 1972 aa13.8□□□□□ -0.2
SMCR2-201ENST00000456090 A0A087WWV3 80 aa13.79□□□□□ -0.2
SMCR2-201ENST00000456090 GALTP07902 379 aa13.79□□□□□ -0.2
SMCR2-201ENST00000456090 AFF1P51825 1210 aaKnown RBP13.79□□□□□ -0.2
SMCR2-201ENST00000456090 PTENP60484 403 aa13.79□□□□□ -0.2
SMCR2-201ENST00000456090 TFDP1Q14186 410 aa13.79□□□□□ -0.2
SMCR2-201ENST00000456090 BMS1Q14692 1282 aaKnown RBP13.79□□□□□ -0.2
SMCR2-201ENST00000456090 ANKRD54Q6NXT1 300 aa13.79□□□□□ -0.2
SMCR2-201ENST00000456090 MRPL10Q7Z7H8 261 aaKnown RBP13.79□□□□□ -0.2
SMCR2-201ENST00000456090 ZNF280BQ86YH2 543 aa13.79□□□□□ -0.2
SMCR2-201ENST00000456090 ASAP3Q8TDY4 903 aa13.79□□□□□ -0.2
SMCR2-201ENST00000456090 SUSD6Q92537 303 aa13.79□□□□□ -0.2
SMCR2-201ENST00000456090 IGSF21Q96ID5 467 aa13.79□□□□□ -0.2
SMCR2-201ENST00000456090 CPB2Q96IY4 423 aa13.79□□□□□ -0.2
SMCR2-201ENST00000456090 APOL5Q9BWW9 433 aa13.79□□□□□ -0.2
SMCR2-201ENST00000456090 PHF7Q9BWX1 381 aaPredicted RBP13.79□□□□□ -0.2
SMCR2-201ENST00000456090 DMDP11532 3685 aa13.79□□□□□ -0.2
SMCR2-201ENST00000456090 MYO15AQ9UKN7 3530 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 PLXNA3P51805 1871 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 MTCL1Q9Y4B5 1905 aaKnown RBP13.78□□□□□ -0.2
SMCR2-201ENST00000456090 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.78□□□□□ -0.2
SMCR2-201ENST00000456090 CARNS1A5YM72 827 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 LOC730098B7Z3J9 87 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 INO80B-WBP1J3KQ70 363 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 B4GALT3O60512 393 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 TSPAN1O60635 241 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 USO1O60763 962 aaKnown RBP13.78□□□□□ -0.2
SMCR2-201ENST00000456090 CXCL14O95715 111 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 SPATA31C1P0DKV0 1188 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 AXLP30530 894 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 ARL2P36404 184 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 SLC11A1P49279 550 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 MBTD1Q05BQ5 628 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 POU5F1BQ06416 359 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 NCBP1Q09161 790 aaKnown RBP13.78□□□□□ -0.2
SMCR2-201ENST00000456090 CAPSQ13938 189 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 CBX2Q14781 532 aaPredicted RBP13.78□□□□□ -0.2
SMCR2-201ENST00000456090 PCBP1Q15365 356 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMCR2-201ENST00000456090 ZNF174Q15697 407 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 C8orf34Q49A92 452 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 HERC4Q5GLZ8 1057 aaPredicted RBP13.78□□□□□ -0.2
SMCR2-201ENST00000456090 NOTUMQ6P988 496 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 SYCE2Q6PIF2 218 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 DDX53Q86TM3 631 aaKnown RBP13.78□□□□□ -0.2
SMCR2-201ENST00000456090 CATSPER3Q86XQ3 398 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 SMG8Q8ND04 991 aaKnown RBP13.78□□□□□ -0.2
SMCR2-201ENST00000456090 BCL7CQ8WUZ0 217 aaPredicted RBP13.78□□□□□ -0.2
SMCR2-201ENST00000456090 AUTS2Q8WXX7 1259 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 RPGRIP1Q96KN7 1286 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 ZSCAN31Q96LW9 406 aaPredicted RBP13.78□□□□□ -0.2
SMCR2-201ENST00000456090 KIF2CQ99661 725 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 EIF2AQ9BY44 585 aaKnown RBP13.78□□□□□ -0.2
SMCR2-201ENST00000456090 ZBP1Q9H171 429 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 POLR3FQ9H1D9 316 aaPredicted RBP13.78□□□□□ -0.2
SMCR2-201ENST00000456090 S1PR5Q9H228 398 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 FOXP1Q9H334 677 aaPredicted RBP13.78□□□□□ -0.2
SMCR2-201ENST00000456090 HCFC2Q9Y5Z7 792 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 CNTNAP2Q9UHC6 1331 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 ZDBF2Q9HCK1 2354 aa13.78□□□□□ -0.2
SMCR2-201ENST00000456090 CLASP2O75122 1294 aaKnown RBP13.77□□□□□ -0.21
SMCR2-201ENST00000456090 MED24O75448 989 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 DDHD2O94830 711 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 POMCP01189 267 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 XRCC6P12956 609 aaKnown RBP eCLIP13.77□□□□□ -0.21
SMCR2-201ENST00000456090 ITGA4P13612 1032 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 HOXB8P17481 243 aaPredicted RBP13.77□□□□□ -0.21
SMCR2-201ENST00000456090 NCLP19338 710 aaKnown RBP13.77□□□□□ -0.21
SMCR2-201ENST00000456090 GLRA2P23416 452 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 PLA2G5P39877 138 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 RBM25P49756 843 aaKnown RBP13.77□□□□□ -0.21
SMCR2-201ENST00000456090 HMGN5P82970 282 aaKnown RBP13.77□□□□□ -0.21
SMCR2-201ENST00000456090 GNL2Q13823 731 aaKnown RBP13.77□□□□□ -0.21
SMCR2-201ENST00000456090 MAEAQ7L5Y9 396 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 DENND4AQ7Z401 1863 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 IFNLR1Q8IU57 520 aaPredicted RBP13.77□□□□□ -0.21
SMCR2-201ENST00000456090 FAM184AQ8NB25 1140 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 TMEM87AQ8NBN3 555 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 CNNM3Q8NE01 707 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 FBXO18Q8NFZ0 1043 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 CASP10Q92851 521 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 CCDC51Q96ER9 411 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 FAM193BQ96PV7 902 aaPredicted RBP13.77□□□□□ -0.21
SMCR2-201ENST00000456090 NFKBIZQ9BYH8 718 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 TUFT1Q9NNX1 390 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 UBN1Q9NPG3 1134 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 SH2B1Q9NRF2 756 aaPredicted RBP13.77□□□□□ -0.21
SMCR2-201ENST00000456090 KANSL3Q9P2N6 904 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 HES2Q9Y543 173 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 IPPQ9Y573 584 aa13.77□□□□□ -0.21
SMCR2-201ENST00000456090 OR52Z1P0C646 297 aa13.76□□□□□ -0.21
SMCR2-201ENST00000456090 CTSAP10619 480 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms