RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 STAG3L1P0CL83 205 aa16.21■□□□□ 0.19
CLCN1-203ENST00000455478 ATF7P17544 494 aaPredicted RBP16.21■□□□□ 0.19
CLCN1-203ENST00000455478 IBSPP21815 317 aaPredicted RBP16.21■□□□□ 0.19
CLCN1-203ENST00000455478 AXLP30530 894 aa16.21■□□□□ 0.19
CLCN1-203ENST00000455478 MAPK6Q16659 721 aa16.21■□□□□ 0.19
CLCN1-203ENST00000455478 TWF2Q6IBS0 349 aaKnown RBP16.21■□□□□ 0.19
CLCN1-203ENST00000455478 TAS1R3Q7RTX0 852 aa16.21■□□□□ 0.19
CLCN1-203ENST00000455478 ZNF598Q86UK7 904 aaKnown RBP16.21■□□□□ 0.19
CLCN1-203ENST00000455478 SP7Q8TDD2 431 aaPredicted RBP16.21■□□□□ 0.19
CLCN1-203ENST00000455478 PRIMPOLQ96LW4 560 aa16.21■□□□□ 0.19
CLCN1-203ENST00000455478 TTYH1Q9H313 450 aaPredicted RBP16.21■□□□□ 0.19
CLCN1-203ENST00000455478 TMEM134Q9H6X4 195 aa16.21■□□□□ 0.19
CLCN1-203ENST00000455478 TMEM161AQ9NX61 479 aa16.21■□□□□ 0.19
CLCN1-203ENST00000455478 LARSQ9P2J5 1176 aaKnown RBP16.21■□□□□ 0.19
CLCN1-203ENST00000455478 KCNG1Q9UIX4 513 aa16.21■□□□□ 0.19
CLCN1-203ENST00000455478 LRFN2Q9ULH4 789 aa16.21■□□□□ 0.19
CLCN1-203ENST00000455478 USP20Q9Y2K6 914 aa16.21■□□□□ 0.19
CLCN1-203ENST00000455478 COL4A6Q14031 1691 aa16.21■□□□□ 0.18
CLCN1-203ENST00000455478 A0A1B0GUA9 196 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 K7ERI5 159 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 FAM13AO94988 1023 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 PRKCBP05771 671 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 LIG1P18858 919 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 GATMP50440 423 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 NCBP1Q09161 790 aaKnown RBP16.2■□□□□ 0.18
CLCN1-203ENST00000455478 MYCT1Q8N699 235 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 TMEM161BQ8NDZ6 487 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 FIZ1Q96SL8 496 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 YME1L1Q96TA2 773 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 TNMDQ9H2S6 317 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 SEMA6BQ9H3T3 888 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 SLC28A3Q9HAS3 691 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 PARVGQ9HBI0 331 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 FAM105AQ9NUU6 356 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 RNF19AQ9NV58 838 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 RNF216Q9NWF9 866 aaPredicted RBP16.2■□□□□ 0.18
CLCN1-203ENST00000455478 CHD7Q9P2D1 2997 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 PCDHB2Q9Y5E7 798 aa16.2■□□□□ 0.18
CLCN1-203ENST00000455478 TMEM265A0A087WTH1 108 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 ACTN4O43707 911 aaKnown RBP16.19■□□□□ 0.18
CLCN1-203ENST00000455478 EOMESO95936 686 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 MAPTP10636 758 aaKnown RBP16.19■□□□□ 0.18
CLCN1-203ENST00000455478 NDUFA8P51970 172 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 SMTNP53814 917 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 NCKAP1LP55160 1127 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 TAP1Q03518 808 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 PRPF4BQ13523 1007 aaKnown RBP16.19■□□□□ 0.18
CLCN1-203ENST00000455478 TPRNQ4KMQ1 711 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 NT5DC1Q5TFE4 455 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 NOTUMQ6P988 496 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 Q7L0L9 218 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 SPRED2Q7Z698 418 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 MRPL10Q7Z7H8 261 aaKnown RBP16.19■□□□□ 0.18
CLCN1-203ENST00000455478 CDR2LQ86X02 465 aaPredicted RBP16.19■□□□□ 0.18
CLCN1-203ENST00000455478 FSIP1Q8NA03 581 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 KCNN1Q92952 543 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 CCDC51Q96ER9 411 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 PYM1Q9BRP8 204 aaKnown RBP16.19■□□□□ 0.18
CLCN1-203ENST00000455478 EIF2AQ9BY44 585 aaKnown RBP16.19■□□□□ 0.18
CLCN1-203ENST00000455478 GOLPH3LQ9H4A5 285 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 ZHX3Q9H4I2 956 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 ZNF576Q9H609 170 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 SERTAD1Q9UHV2 236 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 CNTNAP2Q9UHC6 1331 aa16.19■□□□□ 0.18
CLCN1-203ENST00000455478 FNDC1Q4ZHG4 1894 aaPredicted RBP16.18■□□□□ 0.18
CLCN1-203ENST00000455478 FRMD3A2A2Y4 597 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 LINC01553A4QN01 128 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 TRAK2O60296 914 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 TBCAO75347 108 aaKnown RBP16.18■□□□□ 0.18
CLCN1-203ENST00000455478 SLFN14P0C7P3 912 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 FGFR1P11362 822 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 SKIP12755 728 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 RAB27AP51159 221 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 LONRF3Q496Y0 759 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 CNNM4Q6P4Q7 775 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 HAUS6Q7Z4H7 955 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 RNF169Q8NCN4 708 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 SMG8Q8ND04 991 aaKnown RBP16.18■□□□□ 0.18
CLCN1-203ENST00000455478 MRPS27Q92552 414 aaKnown RBP16.18■□□□□ 0.18
CLCN1-203ENST00000455478 C7orf25Q9BPX7 421 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 TRIM9Q9C026 710 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 LRRC27Q9C0I9 530 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 PDZD7Q9H5P4 517 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 MAGEF1Q9HAY2 307 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 PHLPP2Q6ZVD8 1323 aa16.18■□□□□ 0.18
CLCN1-203ENST00000455478 MEIS3P2A8K0S8 358 aa16.17■□□□□ 0.18
CLCN1-203ENST00000455478 NMT1P30419 496 aaKnown RBP16.17■□□□□ 0.18
CLCN1-203ENST00000455478 SYKP43405 635 aa16.17■□□□□ 0.18
CLCN1-203ENST00000455478 AMPD3Q01432 767 aa16.17■□□□□ 0.18
CLCN1-203ENST00000455478 CLLU1OSQ5K130 101 aa16.17■□□□□ 0.18
CLCN1-203ENST00000455478 ZNF697Q5TEC3 545 aa16.17■□□□□ 0.18
CLCN1-203ENST00000455478 EEF1DP3Q658K8 133 aa16.17■□□□□ 0.18
CLCN1-203ENST00000455478 PPP2R2DQ66LE6 453 aa16.17■□□□□ 0.18
CLCN1-203ENST00000455478 SLC27A1Q6PCB7 646 aa16.17■□□□□ 0.18
CLCN1-203ENST00000455478 SFR1Q86XK3 245 aa16.17■□□□□ 0.18
CLCN1-203ENST00000455478 CMTR2Q8IYT2 770 aaKnown RBP16.17■□□□□ 0.18
CLCN1-203ENST00000455478 DEFB123Q8N688 67 aa16.17■□□□□ 0.18
CLCN1-203ENST00000455478 LPPQ93052 612 aa16.17■□□□□ 0.18
CLCN1-203ENST00000455478 CASD1Q96PB1 797 aa16.17■□□□□ 0.18
CLCN1-203ENST00000455478 ACO2Q99798 780 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms