RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SPIRE2Q8WWL2 714 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 ANKZF1Q9H8Y5 726 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 DDX20Q9UHI6 824 aaKnown RBP17.32■□□□□ 0.36
SNX17-204ENST00000453453 L1RE1Q9UN81 338 aa17.32■□□□□ 0.36
SNX17-204ENST00000453453 CTAGE9A4FU28 777 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 ZBTB42B2RXF5 422 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 H3BQF6 201 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 MYBP10242 640 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 SCP2P22307 547 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 IGBP1P78318 339 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 NKX3-2P78367 333 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 LRRC63Q05C16 580 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 BMT2Q1RMZ1 405 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 KIAA0753Q2KHM9 967 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 CENPPQ6IPU0 288 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 EPM2AIP1Q7L775 607 aaPredicted RBP17.31■□□□□ 0.36
SNX17-204ENST00000453453 ZNF720Q7Z2F6 126 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 NOC3LQ8WTT2 800 aaKnown RBP17.31■□□□□ 0.36
SNX17-204ENST00000453453 SCFD1Q8WVM8 642 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 TMEM143Q96AN5 459 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 MTG1Q9BT17 334 aaPredicted RBP17.31■□□□□ 0.36
SNX17-204ENST00000453453 SUGCTQ9HAC7 445 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 KMT5AQ9NQR1 393 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 PTPN22Q9Y2R2 807 aa17.31■□□□□ 0.36
SNX17-204ENST00000453453 FGFR1OPO95684 399 aaKnown RBP17.3■□□□□ 0.36
SNX17-204ENST00000453453 PGK1P00558 417 aa17.3■□□□□ 0.36
SNX17-204ENST00000453453 LMAN1P49257 510 aa17.3■□□□□ 0.36
SNX17-204ENST00000453453 GRIK4Q16099 956 aa17.3■□□□□ 0.36
SNX17-204ENST00000453453 WDR93Q6P2C0 686 aa17.3■□□□□ 0.36
SNX17-204ENST00000453453 FOXR2Q6PJQ5 311 aa17.3■□□□□ 0.36
SNX17-204ENST00000453453 PPP4R3CPQ6ZMV5 832 aa17.3■□□□□ 0.36
SNX17-204ENST00000453453 TMTC1Q8IUR5 882 aa17.3■□□□□ 0.36
SNX17-204ENST00000453453 NELFCDQ8IXH7 590 aa17.3■□□□□ 0.36
SNX17-204ENST00000453453 PCSK9Q8NBP7 692 aaKnown RBP17.3■□□□□ 0.36
SNX17-204ENST00000453453 GLIS3Q8NEA6 775 aa17.3■□□□□ 0.36
SNX17-204ENST00000453453 ZNF507Q8TCN5 953 aa17.3■□□□□ 0.36
SNX17-204ENST00000453453 TRAPPC12Q8WVT3 735 aa17.3■□□□□ 0.36
SNX17-204ENST00000453453 PSPC1Q8WXF1 523 aaKnown RBP17.3■□□□□ 0.36
SNX17-204ENST00000453453 HVCN1Q96D96 273 aa17.3■□□□□ 0.36
SNX17-204ENST00000453453 FGFBP2Q9BYJ0 223 aa17.3■□□□□ 0.36
SNX17-204ENST00000453453 ST6GALNAC4Q9H4F1 302 aa17.3■□□□□ 0.36
SNX17-204ENST00000453453 RRP15Q9Y3B9 282 aaKnown RBP17.3■□□□□ 0.36
SNX17-204ENST00000453453 IGKV6-21A0A0C4DH24 114 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 MFAP3LO75121 409 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 PRPF6O94906 941 aaKnown RBP17.29■□□□□ 0.36
SNX17-204ENST00000453453 C22orf31O95567 290 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 TMOD1P28289 359 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 ARL2P36404 184 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 NPTX2P47972 431 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 CASP5P51878 434 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 NCKAP1LP55160 1127 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 ADKP55263 362 aaKnown RBP17.29■□□□□ 0.36
SNX17-204ENST00000453453 SOX10P56693 466 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 PURAQ00577 322 aaKnown RBP17.29■□□□□ 0.36
SNX17-204ENST00000453453 MXD4Q14582 209 aaPredicted RBP17.29■□□□□ 0.36
SNX17-204ENST00000453453 KNOP1Q1ED39 458 aaKnown RBP17.29■□□□□ 0.36
SNX17-204ENST00000453453 CDKAL1Q5VV42 579 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 HAUS6Q7Z4H7 955 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 RNF180Q86T96 592 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 METTL13Q8N6R0 699 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 KAT2BQ92831 832 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 NRCAMQ92823 1304 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 EVPLQ92817 2033 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 TRIM49BA6NDI0 452 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 MYADML2A6NDP7 307 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 SLC16A4O15374 487 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 CALUO43852 315 aaPredicted RBP17.29■□□□□ 0.36
SNX17-204ENST00000453453 ADAMTS4O75173 837 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 MYCNP04198 464 aaPredicted RBP17.29■□□□□ 0.36
SNX17-204ENST00000453453 CST5P28325 142 aaPredicted RBP17.29■□□□□ 0.36
SNX17-204ENST00000453453 NAMPTP43490 491 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 SPAG1Q07617 926 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 GOLGA8FQ08AF8 430 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 GOLGA8DPQ0D2H9 430 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 HSP90B2PQ58FF3 399 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 EFCAB12Q6NXP0 572 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 TTI2Q6NXR4 508 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 APTXQ7Z2E3 356 aaKnown RBP17.29■□□□□ 0.36
SNX17-204ENST00000453453 FAM114A1Q8IWE2 563 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 SYCP3Q8IZU3 236 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 CSGALNACT2Q8N6G5 542 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 ANKRD20A12PQ8NF67 263 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 ACCSQ96QU6 501 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 FIZ1Q96SL8 496 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 NAPGQ99747 312 aaPredicted RBP17.29■□□□□ 0.36
SNX17-204ENST00000453453 NTPCRQ9BSD7 190 aaKnown RBP17.29■□□□□ 0.36
SNX17-204ENST00000453453 SEMA6BQ9H3T3 888 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 TMEM206Q9H813 350 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 EXOC7Q9UPT5 735 aa17.29■□□□□ 0.36
SNX17-204ENST00000453453 FRMPD3Q5JV73 1810 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 CTAGE15A4D2H0 777 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 LRRIQ4A6NIV6 560 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 HAS3O00219 553 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 PDXKO00764 312 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 ASAP2O43150 1006 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 CTAGE8P0CG41 777 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 SMIM10L2AP0DMW4 78 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 SMIM10L2BP0DMW5 78 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 GNAT1P11488 350 aa17.28■□□□□ 0.36
SNX17-204ENST00000453453 GLRA2P23416 452 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms