RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 EXOC7Q9UPT5 735 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 SIK3Q9Y2K2 1263 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 USP20Q9Y2K6 914 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.57□□□□□ -1.36
SDC4P-201ENST00000453285 CENPFP49454 3210 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 HTTP42858 3142 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 PHLPP2Q6ZVD8 1323 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 SCN1AP35498 2009 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 A0A087WZ62 844 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 SMIM35A0A1B0GVV1 85 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 ABLIM1O14639 778 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 MAPK13O15264 365 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 EXOC3O60645 756 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 GYPCP04921 128 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 ADRB2P07550 413 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 C6orf222P0C671 652 aaPredicted RBP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 IQCF3P0C7M6 154 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 RARBP10826 455 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 EPB41P11171 864 aaKnown RBP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 GARTP22102 1010 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 CST5P28325 142 aaPredicted RBP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 KLK7P49862 253 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 FXR1P51114 621 aaKnown RBP eCLIP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 EFNA5P52803 228 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 GSDMDP57764 484 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 CCZ1BP86790 482 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 CCZ1P86791 482 aaPredicted RBP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 ZNF200P98182 395 aaPredicted RBP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 MAP2K1Q02750 393 aaPredicted RBP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 MBTD1Q05BQ5 628 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 PPP2R3AQ06190 1150 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 RBL2Q08999 1139 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 GOLGA8FQ08AF8 430 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 GOLGA8DPQ0D2H9 430 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 KCNH2Q12809 1159 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 LRMPQ12912 555 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 SYCP1Q15431 976 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 GNASQ5JWF2 1037 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 C1orf220Q5T0J3 134 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 LHX8Q68G74 356 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 NFRKBQ6P4R8 1299 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 ZPBP2Q6X784 338 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 RUFY4Q6ZNE9 571 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 RHPN2Q8IUC4 686 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 FAM186BQ8IYM0 893 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 CCDC155Q8N6L0 562 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 METTL13Q8N6R0 699 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 DNAJC5GQ8N7S2 189 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 TC2NQ8N9U0 490 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 XXYLT1Q8NBI6 393 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 RAET1EQ8TD07 263 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 PLEKHO2Q8TD55 490 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 SLC35C1Q96A29 364 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 TRIM44Q96DX7 344 aaPredicted RBP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 ZNF668Q96K58 619 aaPredicted RBP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 ZBTB45Q96K62 511 aaPredicted RBP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 MFSD14AQ96MC6 490 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 ACO2Q99798 780 aaKnown RBP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 FDXACB1Q9BRP7 624 aaPredicted RBP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 MTG1Q9BT17 334 aaPredicted RBP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 TARS2Q9BW92 718 aaKnown RBP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 NFKBIZQ9BYH8 718 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 TTYH3Q9C0H2 523 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 C2orf40Q9H1Z8 148 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 ADAMTS10Q9H324 1103 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 MINDY3Q9H8M7 445 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 IFT122Q9HBG6 1241 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 WBP1LQ9NX94 342 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 HDAC6Q9UBN7 1215 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 ARMCX3Q9UH62 379 aaPredicted RBP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 DDX20Q9UHI6 824 aaKnown RBP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 TSKSQ9UJT2 592 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 ZKSCAN5Q9Y2L8 839 aa6.56□□□□□ -1.36
SDC4P-201ENST00000453285 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.56□□□□□ -1.36
SDC4P-201ENST00000453285 GRIN2DO15399 1336 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 TET1Q8NFU7 2136 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 TDRD15B5MCY1 1934 aaKnown RBP6.55□□□□□ -1.36
SDC4P-201ENST00000453285 A0A0B4J269 797 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 GOLGA8IPA6NC78 632 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 GOLGA8JA6NMD2 632 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 ACKR2O00590 384 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 HNRNPDLO14979 420 aaKnown RBP6.55□□□□□ -1.36
SDC4P-201ENST00000453285 TREHO43280 583 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 GPR32O75388 356 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 NOL4O94818 638 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 AFPP02771 609 aaKnown RBP6.55□□□□□ -1.36
SDC4P-201ENST00000453285 VTNP04004 478 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 INHAP05111 366 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 PRKCBP05771 671 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 TPM2P07951 284 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 FECHP22830 423 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 PROZP22891 400 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 TMOD1P28289 359 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 CASP14P31944 242 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 GRK4P32298 578 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 LIG4P49917 911 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 GPC3P51654 580 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 ADKP55263 362 aaKnown RBP6.55□□□□□ -1.36
SDC4P-201ENST00000453285 DLG4P78352 724 aa6.55□□□□□ -1.36
SDC4P-201ENST00000453285 BFSP1Q12934 665 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms