RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 SRGAP2CP0DJJ0 459 aa13.06□□□□□ -0.32
GARNL3-210ENST00000453030 AFF1P51825 1210 aaKnown RBP13.06□□□□□ -0.32
GARNL3-210ENST00000453030 SCRN1Q12765 414 aa13.06□□□□□ -0.32
GARNL3-210ENST00000453030 NCAPH2Q6IBW4 605 aa13.06□□□□□ -0.32
GARNL3-210ENST00000453030 AGMOQ6ZNB7 445 aa13.06□□□□□ -0.32
GARNL3-210ENST00000453030 CABP7Q86V35 215 aa13.06□□□□□ -0.32
GARNL3-210ENST00000453030 PGBD4Q96DM1 585 aa13.06□□□□□ -0.32
GARNL3-210ENST00000453030 PHF20Q9BVI0 1012 aa13.06□□□□□ -0.32
GARNL3-210ENST00000453030 MINDY3Q9H8M7 445 aa13.06□□□□□ -0.32
GARNL3-210ENST00000453030 RSAD1Q9HA92 442 aa13.06□□□□□ -0.32
GARNL3-210ENST00000453030 KCNMB3Q9NPA1 279 aa13.06□□□□□ -0.32
GARNL3-210ENST00000453030 GJB4Q9NTQ9 266 aa13.06□□□□□ -0.32
GARNL3-210ENST00000453030 PDRG1Q9NUG6 133 aa13.06□□□□□ -0.32
GARNL3-210ENST00000453030 IRAK3Q9Y616 596 aa13.06□□□□□ -0.32
GARNL3-210ENST00000453030 RIF1Q5UIP0 2472 aaKnown RBP13.06□□□□□ -0.32
GARNL3-210ENST00000453030 FAM186AA6NE01 2351 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 CARNS1A5YM72 827 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 MARCH6O60337 910 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 DKC1O60832 514 aaKnown RBP eCLIP13.05□□□□□ -0.328e-6■□□□□ 10.8
GARNL3-210ENST00000453030 ZNF623O75123 536 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 CDKL5O76039 1030 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 DDHD2O94830 711 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 POMCP01189 267 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 P4HBP07237 508 aaKnown RBP13.05□□□□□ -0.32
GARNL3-210ENST00000453030 CYP4A11Q02928 519 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 LAMTOR4Q0VGL1 99 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 GIT2Q14161 759 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 EMC2Q15006 297 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 PIK3AP1Q6ZUJ8 805 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 UBALD2Q8IYN6 164 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 FAM177A1Q8N128 213 aaPredicted RBP13.05□□□□□ -0.32
GARNL3-210ENST00000453030 RNF149Q8NC42 400 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 OXER1Q8TDS5 423 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 SLC22A17Q8WUG5 538 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 PRPF31Q8WWY3 499 aaKnown RBP13.05□□□□□ -0.32
GARNL3-210ENST00000453030 ATOH1Q92858 354 aaPredicted RBP13.05□□□□□ -0.32
GARNL3-210ENST00000453030 FAM20AQ96MK3 541 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 FAM193BQ96PV7 902 aaPredicted RBP13.05□□□□□ -0.32
GARNL3-210ENST00000453030 TM6SF1Q9BZW5 370 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 DHX33Q9H6R0 707 aaKnown RBP13.05□□□□□ -0.32
GARNL3-210ENST00000453030 SFXN1Q9H9B4 322 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 RGL1Q9NZL6 768 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 PRG3Q9Y2Y8 225 aaPredicted RBP13.05□□□□□ -0.32
GARNL3-210ENST00000453030 PTPRZ1P23471 2315 aaPredicted RBP13.05□□□□□ -0.32
GARNL3-210ENST00000453030 DOCK6Q96HP0 2047 aa13.05□□□□□ -0.32
GARNL3-210ENST00000453030 FAM205CA6NFA0 338 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 H0Y858 1186 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 C2CD2LO14523 706 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 ERLIN2O94905 339 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 GCFC2P16383 781 aaKnown RBP13.04□□□□□ -0.32
GARNL3-210ENST00000453030 YWHABP31946 246 aaKnown RBP13.04□□□□□ -0.32
GARNL3-210ENST00000453030 RFC5P40937 340 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 CTTNQ14247 550 aaKnown RBP13.04□□□□□ -0.32
GARNL3-210ENST00000453030 XKR9Q5GH70 373 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 ATAT1Q5SQI0 421 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 UBXN11Q5T124 520 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 PPP4R3AQ6IN85 833 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 SRGAP1Q7Z6B7 1085 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 HAS1Q92839 578 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 DYDC2Q96IM9 177 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 EMILIN2Q9BXX0 1053 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 LIMD1Q9UGP4 676 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 STK36Q9NRP7 1315 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 CNTNAP2Q9UHC6 1331 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 WDR87Q6ZQQ6 2873 aa13.04□□□□□ -0.32
GARNL3-210ENST00000453030 ZBTB39O15060 712 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 EPB41L2O43491 1005 aaKnown RBP13.03□□□□□ -0.32
GARNL3-210ENST00000453030 GFRA3O60609 400 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 CNPP09543 421 aaKnown RBP13.03□□□□□ -0.32
GARNL3-210ENST00000453030 XBP1P17861 261 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 KLRC2P26717 231 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 HOXA11P31270 313 aaPredicted RBP13.03□□□□□ -0.32
GARNL3-210ENST00000453030 MLH1P40692 756 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 CLCN4P51793 760 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 EARS2Q5JPH6 523 aaKnown RBP13.03□□□□□ -0.32
GARNL3-210ENST00000453030 CCDC149Q6ZUS6 474 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 FERMT3Q86UX7 667 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 PPFIBP1Q86W92 1011 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 C4orf19Q8IY42 314 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 EXOC8Q8IYI6 725 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 ZDHHC14Q8IZN3 488 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 TMEM105Q8N8V8 129 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 TCP11Q8WWU5 503 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 CPB2Q96IY4 423 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 KLHL5Q96PQ7 755 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 MTRQ99707 1265 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 MFSD1Q9H3U5 465 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 FAN1Q9Y2M0 1017 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 PPME1Q9Y570 386 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 TRIP11Q15643 1979 aa13.03□□□□□ -0.32
GARNL3-210ENST00000453030 NRP1O14786 923 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 GAS2O43903 313 aaKnown RBP13.02□□□□□ -0.33
GARNL3-210ENST00000453030 TSPAN1O60635 241 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 URODP06132 367 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 MYBP10242 640 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 ITGA4P13612 1032 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 OR1G1P47890 313 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 AK2P54819 239 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 NR5A1Q13285 461 aa13.02□□□□□ -0.33
GARNL3-210ENST00000453030 EPHA7Q15375 998 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms