RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 GIT2Q14161 759 aa15.85■□□□□ 0.13
COL3A1-203ENST00000450867 ADALQ6DHV7 355 aa15.85■□□□□ 0.13
COL3A1-203ENST00000450867 TWF2Q6IBS0 349 aaKnown RBP15.85■□□□□ 0.13
COL3A1-203ENST00000450867 NOTUMQ6P988 496 aa15.85■□□□□ 0.13
COL3A1-203ENST00000450867 Q7L0L9 218 aa15.85■□□□□ 0.13
COL3A1-203ENST00000450867 MRPL10Q7Z7H8 261 aaKnown RBP15.85■□□□□ 0.13
COL3A1-203ENST00000450867 DEPTORQ8TB45 409 aa15.85■□□□□ 0.13
COL3A1-203ENST00000450867 CLP1Q92989 425 aaKnown RBP15.85■□□□□ 0.13
COL3A1-203ENST00000450867 TMEM134Q9H6X4 195 aa15.85■□□□□ 0.13
COL3A1-203ENST00000450867 POLD4Q9HCU8 107 aa15.85■□□□□ 0.13
COL3A1-203ENST00000450867 LARSQ9P2J5 1176 aaKnown RBP15.85■□□□□ 0.13
COL3A1-203ENST00000450867 PCDHB7Q9Y5E2 793 aa15.85■□□□□ 0.13
COL3A1-203ENST00000450867 CITO14578 2027 aa15.85■□□□□ 0.13
COL3A1-203ENST00000450867 NPHP3-ACAD11A0A0J9YXS1 232 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 B4GALT5O43286 388 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 HOXA2O43364 376 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 CMA1P23946 247 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 NCKAP1LP55160 1127 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 PEX3P56589 373 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 NCBP1Q09161 790 aaKnown RBP15.84■□□□□ 0.13
COL3A1-203ENST00000450867 MAPK6Q16659 721 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 CNNM4Q6P4Q7 775 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 SV2BQ7L1I2 683 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 TAS1R3Q7RTX0 852 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 DNAJC19Q96DA6 116 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 GUCD1Q96NT3 240 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 SAMD11Q96NU1 681 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 TNMDQ9H2S6 317 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 MAGEF1Q9HAY2 307 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 FAM105AQ9NUU6 356 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 KBTBD4Q9NVX7 518 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 LRFN2Q9ULH4 789 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 ZMYM2Q9UBW7 1377 aa15.84■□□□□ 0.13
COL3A1-203ENST00000450867 PDCD11Q14690 1871 aaKnown RBP15.83■□□□□ 0.12
COL3A1-203ENST00000450867 A0A1W2PQ27 194 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 A0A1W2PQ64 194 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 A0A1W2PQD8 194 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 MYMKA6NI61 221 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 EDN1P05305 212 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 PRKCBP05771 671 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 NCLP19338 710 aaKnown RBP15.83■□□□□ 0.12
COL3A1-203ENST00000450867 SMTNP53814 917 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 RAD51AP2Q09MP3 1159 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 GRIN2CQ14957 1233 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 SLC27A1Q6PCB7 646 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 PDILTQ8N807 584 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 IQUBQ8NA54 791 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 TMEM161BQ8NDZ6 487 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 CNNM3Q8NE01 707 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 TGS1Q96RS0 853 aaKnown RBP15.83■□□□□ 0.12
COL3A1-203ENST00000450867 FIZ1Q96SL8 496 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 PYM1Q9BRP8 204 aaKnown RBP15.83■□□□□ 0.12
COL3A1-203ENST00000450867 KIFC3Q9BVG8 833 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 TMEM117Q9H0C3 514 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 PARVGQ9HBI0 331 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 KMT5AQ9NQR1 393 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 FAM13BQ9NYF5 915 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 HPSEQ9Y251 543 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 PCDHB2Q9Y5E7 798 aa15.83■□□□□ 0.12
COL3A1-203ENST00000450867 PLXNA4Q9HCM2 1894 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 PRRC2BQ5JSZ5 2229 aaKnown RBP15.82■□□□□ 0.12
COL3A1-203ENST00000450867 FRMD3A2A2Y4 597 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 TTLL13PA6NNM8 815 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 SFI1A8K8P3 1242 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 H0YCG3 227 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 K7ERI5 159 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 INPPL1O15357 1258 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 PRPF4BQ13523 1007 aaKnown RBP15.82■□□□□ 0.12
COL3A1-203ENST00000450867 BTG3Q14201 252 aaPredicted RBP15.82■□□□□ 0.12
COL3A1-203ENST00000450867 DHX8Q14562 1220 aaKnown RBP15.82■□□□□ 0.12
COL3A1-203ENST00000450867 CLLU1OSQ5K130 101 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 SPRED2Q7Z698 418 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 FIBCD1Q8N539 461 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 SMG8Q8ND04 991 aaKnown RBP15.82■□□□□ 0.12
COL3A1-203ENST00000450867 DDX12PQ92771 950 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 CPB2Q96IY4 423 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 PANK2Q9BZ23 570 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 ST6GALNAC4Q9H4F1 302 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 SEL1LQ9UBV2 794 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 RWDD3Q9Y3V2 267 aa15.82■□□□□ 0.12
COL3A1-203ENST00000450867 CCDC169A6NNP5 214 aa15.81■□□□□ 0.12
COL3A1-203ENST00000450867 C5orf67F2Z3F1 127 aa15.81■□□□□ 0.12
COL3A1-203ENST00000450867 N4BP3O15049 544 aa15.81■□□□□ 0.12
COL3A1-203ENST00000450867 SLC16A4O15374 487 aa15.81■□□□□ 0.12
COL3A1-203ENST00000450867 TBCAO75347 108 aaKnown RBP15.81■□□□□ 0.12
COL3A1-203ENST00000450867 FAM13AO94988 1023 aa15.81■□□□□ 0.12
COL3A1-203ENST00000450867 MAPTP10636 758 aaKnown RBP15.81■□□□□ 0.12
COL3A1-203ENST00000450867 FGFR1P11362 822 aa15.81■□□□□ 0.12
COL3A1-203ENST00000450867 POU3F3P20264 500 aaPredicted RBP15.81■□□□□ 0.12
COL3A1-203ENST00000450867 ABCD1P33897 745 aa15.81■□□□□ 0.12
COL3A1-203ENST00000450867 GATMP50440 423 aa15.81■□□□□ 0.12
COL3A1-203ENST00000450867 CACNB1Q02641 598 aaPredicted RBP15.81■□□□□ 0.12
COL3A1-203ENST00000450867 NT5DC1Q5TFE4 455 aa15.81■□□□□ 0.12
COL3A1-203ENST00000450867 SLC17A8Q8NDX2 589 aa15.81■□□□□ 0.12
COL3A1-203ENST00000450867 PGBD4Q96DM1 585 aa15.81■□□□□ 0.12
COL3A1-203ENST00000450867 CASD1Q96PB1 797 aa15.81■□□□□ 0.12
COL3A1-203ENST00000450867 CDX2Q99626 313 aaPredicted RBP15.81■□□□□ 0.12
COL3A1-203ENST00000450867 EIF2AQ9BY44 585 aaKnown RBP15.81■□□□□ 0.12
COL3A1-203ENST00000450867 LRRC27Q9C0I9 530 aa15.81■□□□□ 0.12
COL3A1-203ENST00000450867 PDZD7Q9H5P4 517 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms