RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SUPT3HO75486 399 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 DCTN3O75935 186 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 T-ENOLP0DO92 83 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 FCER1AP12319 257 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 ZFXP17010 805 aaPredicted RBP9.25□□□□□ -0.93
LSM5-208ENST00000450169 COL9A1P20849 921 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 ARID5AQ03989 594 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 NPY5RQ15761 445 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 CERKLQ49MI3 558 aaPredicted RBP9.25□□□□□ -0.93
LSM5-208ENST00000450169 CCDC92Q53HC0 331 aaPredicted RBP9.25□□□□□ -0.93
LSM5-208ENST00000450169 C1orf141Q5JVX7 400 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 FAM83BQ5T0W9 1011 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 KLC3Q6P597 504 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 RFWD3Q6PCD5 774 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 ZDHHC24Q6UX98 284 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 PIK3AP1Q6ZUJ8 805 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 NUDT18Q6ZVK8 323 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 LRRC43Q8N309 656 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 TMTC2Q8N394 836 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 NME8Q8N427 588 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 ABTB1Q969K4 478 aaPredicted RBP9.25□□□□□ -0.93
LSM5-208ENST00000450169 ZNF594Q96JF6 807 aaPredicted RBP9.25□□□□□ -0.93
LSM5-208ENST00000450169 MAGEB18Q96M61 343 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 PLIN2Q99541 437 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 CORO1BQ9BR76 489 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 PITPNM3Q9BZ71 974 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 SEMA6BQ9H3T3 888 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 TLE6Q9H808 572 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 METTL14Q9HCE5 456 aaKnown RBP9.25□□□□□ -0.93
LSM5-208ENST00000450169 DDX43Q9NXZ2 648 aaKnown RBP9.25□□□□□ -0.93
LSM5-208ENST00000450169 CEP126Q9P2H0 1117 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 TBC1D30Q9Y2I9 924 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 MYH4Q9Y623 1939 aa9.25□□□□□ -0.93
LSM5-208ENST00000450169 PITPNM2Q9BZ72 1349 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 C1orf167Q5SNV9 1468 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 SOCS7O14512 581 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 KRT36O76013 467 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 CIAO1O76071 339 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 CBX6O95503 412 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 FGGP02679 453 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 VAV1P15498 845 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 CREB1P16220 341 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 FUT4P22083 530 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 YY1P25490 414 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 SERPINB3P29508 390 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 ATP5DP30049 168 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 KLHL30Q0D2K2 578 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 WDR72Q3MJ13 1102 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 TCERG1LQ5VWI1 586 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 DAB2IPQ5VWQ8 1189 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 DUS1LQ6P1R4 473 aaKnown RBP9.24□□□□□ -0.93
LSM5-208ENST00000450169 MFSD6Q6ZSS7 791 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 C3orf67Q6ZVT6 689 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 KBTBD2Q8IY47 623 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 ST13P4Q8IZP2 240 aaPredicted RBP9.24□□□□□ -0.93
LSM5-208ENST00000450169 ESR2Q92731 530 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 HAUS1Q96CS2 278 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 ROPN1BQ9BZX4 212 aaPredicted RBP9.24□□□□□ -0.93
LSM5-208ENST00000450169 TANGO6Q9C0B7 1094 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 NT5C3AQ9H0P0 336 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 ROPN1Q9HAT0 212 aaPredicted RBP9.24□□□□□ -0.93
LSM5-208ENST00000450169 SNX24Q9Y343 169 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 FAM187AA6NFU0 413 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 PP2D1A8MPX8 630 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 KIAA0391O15091 583 aaKnown RBP9.24□□□□□ -0.93
LSM5-208ENST00000450169 TBX10O75333 385 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 PABPC4LP0CB38 370 aaKnown RBP9.24□□□□□ -0.93
LSM5-208ENST00000450169 PTPN4P29074 926 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 UBA7P41226 1012 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 POLR2FP61218 127 aaKnown RBP9.24□□□□□ -0.93
LSM5-208ENST00000450169 ASIC1P78348 528 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 CDR2Q01850 454 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 RAPGEF1Q13905 1077 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 PPP2R5EQ16537 467 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 KBTBD12Q3ZCT8 623 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 KIAA1755Q5JYT7 1200 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 C10orf76Q5T2E6 689 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 CENPPQ6IPU0 288 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 DSTYKQ6XUX3 929 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 RINLQ6ZS11 566 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 CCDC80Q76M96 950 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 NELFCDQ8IXH7 590 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 RIBC1Q8N443 379 aaPredicted RBP9.24□□□□□ -0.93
LSM5-208ENST00000450169 ARL10Q8N8L6 244 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 TPCN2Q8NHX9 752 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 GLG1Q92896 1179 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 DYDC2Q96IM9 177 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 MPP4Q96JB8 637 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 CRAMP1Q96RY5 1269 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 OXCT2Q9BYC2 517 aaPredicted RBP9.24□□□□□ -0.93
LSM5-208ENST00000450169 NAPBQ9H115 298 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 UNC45AQ9H3U1 944 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.24□□□□□ -0.93
LSM5-208ENST00000450169 SUCLA2Q9P2R7 463 aaPredicted RBP9.24□□□□□ -0.93
LSM5-208ENST00000450169 STX18Q9P2W9 335 aaKnown RBP9.24□□□□□ -0.93
LSM5-208ENST00000450169 MTRF1LQ9UGC7 380 aaKnown RBP9.24□□□□□ -0.93
LSM5-208ENST00000450169 NR2E1Q9Y466 385 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 TACC3Q9Y6A5 838 aa9.24□□□□□ -0.93
LSM5-208ENST00000450169 V9GY48 417 aaPredicted RBP9.24□□□□□ -0.93
LSM5-208ENST00000450169 PHRF1Q9P1Y6 1649 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms