RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 LRRC53A6NM62 1247 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 CACNB2Q08289 660 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 KYAT1Q16773 422 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 TAS2R42Q7RTR8 314 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 SIRT2Q8IXJ6 389 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 ARMC2Q8NEN0 867 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 ZNF564Q8TBZ8 553 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 THEGQ9P2T0 379 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 IP6K2Q9UHH9 426 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 PIN4Q9Y237 131 aaKnown RBP14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 MBD5Q9P267 1494 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 GRIK1P39086 918 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 KCNJ6P48051 423 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 CLCN6P51797 869 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 GFPT1Q06210 699 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 CAPRIN1Q14444 709 aaKnown RBP14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 KCNV1Q6PIU1 500 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 ZNF467Q7Z7K2 595 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 RNF25Q96BH1 459 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 ULK4Q96C45 1275 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 ZNF560Q96MR9 790 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 YIPF3Q9GZM5 350 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 TRPC7Q9HCX4 862 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 ZNF212Q9UDV6 495 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 SCOCQ9UIL1 159 aa14.89□□□□□ -0.03
RAPGEF3-205ENST00000449771 DFFAO00273 331 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 ATP1A3P13637 1013 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 KCNA1Q09470 495 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 ANO4Q32M45 955 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 LDHDQ86WU2 507 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 ZNF579Q8NAF0 562 aaKnown RBP14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 CALR3Q96L12 384 aaKnown RBP14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 SPON1Q9HCB6 807 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 ANLNQ9NQW6 1124 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 A0A0G2JLW4 131 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 TMPRSS15P98073 1019 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 PTK2BQ14289 1009 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 PBXIP1Q96AQ6 731 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 SIK2Q9H0K1 926 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 VPS11Q9H270 941 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 NFU1Q9UMS0 254 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 MIF4GDA9UHW6 222 aaKnown RBP14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 AKR1B1P15121 316 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 GUCY2CP25092 1073 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 SSTR3P32745 418 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 PRCPP42785 496 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 ORC2Q13416 577 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 TBCCQ15814 346 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 HEATR6Q6AI08 1181 aaKnown RBP14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 PVALEFA0A1B0GWK0 134 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 ESRRAP11474 423 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 TAF1CQ15572 869 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 NAALADL2Q58DX5 795 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 TTC39CQ8N584 583 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 KCNA4P22459 653 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 ZNF157P51786 506 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 LBRQ14739 615 aaKnown RBP14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 HSP90AA5PQ58FG0 334 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 SPATA2LQ8IUW3 424 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 EGFL8Q99944 293 aa14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 UPF3AQ9H1J1 476 aaKnown RBP14.88□□□□□ -0.03
RAPGEF3-205ENST00000449771 ABCA8O94911 1581 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 CPSF1Q10570 1443 aaKnown RBP14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 ALS2CLQ60I27 953 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 ACTR5Q9H9F9 607 aaPredicted RBP14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 JPH1Q9HDC5 661 aaPredicted RBP14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 SEL1LQ9UBV2 794 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 AGO2Q9UKV8 859 aaKnown RBP14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 INTUQ9ULD6 942 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 COPS2P61201 443 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 RBM46Q8TBY0 533 aaKnown RBP14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 KLHL29Q96CT2 875 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 PCDHA10Q9Y5I2 948 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 ZCCHC11Q5TAX3 1644 aaKnown RBP14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 LGALS16A8MUM7 142 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 KPNA7A9QM74 516 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 H3BRJ5 948 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 DNAJC8O75937 253 aaPredicted RBP14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 TDP2O95551 362 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 SMARCA1P28370 1054 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 FAM102AQ5T9C2 384 aaPredicted RBP14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 ITPRIPL1Q6GPH6 555 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 NUDT18Q6ZVK8 323 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 DDX53Q86TM3 631 aaKnown RBP14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 TRIM59Q8IWR1 403 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 NDFIP2Q9NV92 336 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 ZNRF3Q9ULT6 936 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 SNX24Q9Y343 169 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 WDR19Q8NEZ3 1342 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 KRT38O76015 456 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 MYBL1P10243 752 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 RAD51Q06609 339 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 DHX35Q9H5Z1 703 aaKnown RBP14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 CNOT7Q9UIV1 285 aaKnown RBP14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 HACL1Q9UJ83 578 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 CHUKO15111 745 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 YWHABP31946 246 aaKnown RBP14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 ROR1Q01973 937 aa14.87□□□□□ -0.03
RAPGEF3-205ENST00000449771 RBBP7Q16576 425 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms