RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 DUSP6Q16828 381 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 NOTUMQ6P988 496 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 IFNLR1Q8IU57 520 aaPredicted RBP16.96■□□□□ 0.31
CHD3-205ENST00000449744 MCPH1Q8NEM0 835 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 TMX3Q96JJ7 454 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 GBP3Q9H0R5 595 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 RSAD1Q9HA92 442 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 CD320Q9NPF0 282 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 TBC1D13Q9NVG8 400 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 DBR1Q9UK59 544 aaKnown RBP16.96■□□□□ 0.31
CHD3-205ENST00000449744 REV3LO60673 3130 aa16.96■□□□□ 0.31
CHD3-205ENST00000449744 CNTNAP2Q9UHC6 1331 aa16.96■□□□□ 0.3
CHD3-205ENST00000449744 ARHGEF35A5YM69 484 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 TSPAN1O60635 241 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 ITGA4P13612 1032 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 CCT6AP40227 531 aaKnown RBP16.95■□□□□ 0.3
CHD3-205ENST00000449744 SMC1AQ14683 1233 aaKnown RBP16.95■□□□□ 0.3
CHD3-205ENST00000449744 SMAD2Q15796 467 aaKnown RBP16.95■□□□□ 0.3
CHD3-205ENST00000449744 UBXN11Q5T124 520 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 MCTP1Q6DN14 999 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 POTEGQ6S5H5 508 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 AGMOQ6ZNB7 445 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 MRPL10Q7Z7H8 261 aaKnown RBP16.95■□□□□ 0.3
CHD3-205ENST00000449744 CCDC51Q96ER9 411 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 CPB2Q96IY4 423 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 MSLNLQ96KJ4 702 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 FAM193BQ96PV7 902 aaPredicted RBP16.95■□□□□ 0.3
CHD3-205ENST00000449744 RAB34Q9BZG1 259 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 EPHX3Q9H6B9 360 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 NRDE2Q9H7Z3 1164 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 UBN1Q9NPG3 1134 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 CLEC1BQ9P126 229 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 KANSL3Q9P2N6 904 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 LRWD1Q9UFC0 647 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 BARX2Q9UMQ3 279 aaPredicted RBP16.95■□□□□ 0.3
CHD3-205ENST00000449744 STK24Q9Y6E0 443 aa16.95■□□□□ 0.3
CHD3-205ENST00000449744 BDP1A6H8Y1 2624 aa16.94■□□□□ 0.3
CHD3-205ENST00000449744 LRRIQ4A6NIV6 560 aa16.94■□□□□ 0.3
CHD3-205ENST00000449744 H3BQV1 296 aa16.94■□□□□ 0.3
CHD3-205ENST00000449744 GLP2RO95838 553 aa16.94■□□□□ 0.3
CHD3-205ENST00000449744 NCLP19338 710 aaKnown RBP16.94■□□□□ 0.3
CHD3-205ENST00000449744 MUTP22033 750 aa16.94■□□□□ 0.3
CHD3-205ENST00000449744 FXR2P51116 673 aaKnown RBP eCLIP16.94■□□□□ 0.33e-8■■■■■ 30.8
CHD3-205ENST00000449744 MBTD1Q05BQ5 628 aa16.94■□□□□ 0.3
CHD3-205ENST00000449744 ZBTB8OSQ8IWT0 167 aa16.94■□□□□ 0.3
CHD3-205ENST00000449744 ADHFE1Q8IWW8 467 aa16.94■□□□□ 0.3
CHD3-205ENST00000449744 HACE1Q8IYU2 909 aa16.94■□□□□ 0.3
CHD3-205ENST00000449744 FAM122AQ96E09 287 aa16.94■□□□□ 0.3
CHD3-205ENST00000449744 POP1Q99575 1024 aaKnown RBP16.94■□□□□ 0.3
CHD3-205ENST00000449744 NFKBIZQ9BYH8 718 aa16.94■□□□□ 0.3
CHD3-205ENST00000449744 TRIM6Q9C030 488 aaPredicted RBP16.94■□□□□ 0.3
CHD3-205ENST00000449744 CSRNP2Q9H175 543 aa16.94■□□□□ 0.3
CHD3-205ENST00000449744 GPRC5CQ9NQ84 441 aa16.94■□□□□ 0.3
CHD3-205ENST00000449744 HIDE1A8MVS5 230 aa16.93■□□□□ 0.3
CHD3-205ENST00000449744 GALTP07902 379 aa16.93■□□□□ 0.3
CHD3-205ENST00000449744 GJB2P29033 226 aa16.93■□□□□ 0.3
CHD3-205ENST00000449744 TOB1P50616 345 aaPredicted RBP16.93■□□□□ 0.3
CHD3-205ENST00000449744 ZP2Q05996 745 aa16.93■□□□□ 0.3
CHD3-205ENST00000449744 COASYQ13057 564 aa16.93■□□□□ 0.3
CHD3-205ENST00000449744 PTGDRQ13258 359 aa16.93■□□□□ 0.3
CHD3-205ENST00000449744 PADI6Q6TGC4 694 aa16.93■□□□□ 0.3
CHD3-205ENST00000449744 C4orf32Q8N8J7 132 aa16.93■□□□□ 0.3
CHD3-205ENST00000449744 TMEM87AQ8NBN3 555 aa16.93■□□□□ 0.3
CHD3-205ENST00000449744 EIF2AQ9BY44 585 aaKnown RBP16.93■□□□□ 0.3
CHD3-205ENST00000449744 IPPQ9Y573 584 aa16.93■□□□□ 0.3
CHD3-205ENST00000449744 PCDHB6Q9Y5E3 794 aa16.93■□□□□ 0.3
CHD3-205ENST00000449744 LAD1O00515 517 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 EYA4O95677 639 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 CXCL14O95715 111 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 POMCP01189 267 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 ARF4P18085 180 aaPredicted RBP16.92■□□□□ 0.3
CHD3-205ENST00000449744 CYP11B2P19099 503 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 SLC11A1P49279 550 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 PDIA5Q14554 519 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 RILPL1Q5EBL4 403 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 LLGL2Q6P1M3 1020 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 ZNF280BQ86YH2 543 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 VPS52Q8N1B4 723 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 MRPL43Q8N983 215 aaKnown RBP16.92■□□□□ 0.3
CHD3-205ENST00000449744 SMRP1Q8NCR6 262 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 SMG8Q8ND04 991 aaKnown RBP16.92■□□□□ 0.3
CHD3-205ENST00000449744 SNX29Q8TEQ0 813 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 KHSRPQ92945 711 aaKnown RBP eCLIP16.92■□□□□ 0.3
CHD3-205ENST00000449744 IGSF21Q96ID5 467 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 TBC1D32Q96NH3 1257 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 PRMT7Q9NVM4 692 aaPredicted RBP16.92■□□□□ 0.3
CHD3-205ENST00000449744 DNAJB4Q9UDY4 337 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 SMC3Q9UQE7 1217 aa16.92■□□□□ 0.3
CHD3-205ENST00000449744 PI4K2BG5E9Z4 385 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 B4GALT5O43286 388 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 CD2BP2O95400 341 aaKnown RBP16.91■□□□□ 0.3
CHD3-205ENST00000449744 ALDH2P05091 517 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 ALADP13716 330 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 RBM10P98175 930 aaKnown RBP16.91■□□□□ 0.3
CHD3-205ENST00000449744 PPP2R5AQ15172 486 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 AMHR2Q16671 573 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 TMEM132AQ24JP5 1023 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 TMEM31Q5JXX7 168 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 KRT79Q5XKE5 535 aa16.91■□□□□ 0.3
CHD3-205ENST00000449744 SLC27A1Q6PCB7 646 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms