RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 PIGRP01833 764 aa15.43■□□□□ 0.06
SHMT2-203ENST00000449049 EDN1P05305 212 aa15.43■□□□□ 0.06
SHMT2-203ENST00000449049 PRKCBP05771 671 aa15.43■□□□□ 0.06
SHMT2-203ENST00000449049 DARSP14868 501 aaKnown RBP15.43■□□□□ 0.06
SHMT2-203ENST00000449049 THPOP40225 353 aa15.43■□□□□ 0.06
SHMT2-203ENST00000449049 MYL5Q02045 173 aa15.43■□□□□ 0.06
SHMT2-203ENST00000449049 MAPK6Q16659 721 aa15.43■□□□□ 0.06
SHMT2-203ENST00000449049 FAM26DQ5JW98 314 aa15.43■□□□□ 0.06
SHMT2-203ENST00000449049 ANKRD40Q6AI12 368 aa15.43■□□□□ 0.06
SHMT2-203ENST00000449049 AOPEPQ8N6M6 819 aa15.43■□□□□ 0.06
SHMT2-203ENST00000449049 OSMRQ99650 979 aa15.43■□□□□ 0.06
SHMT2-203ENST00000449049 GBP3Q9H0R5 595 aa15.43■□□□□ 0.06
SHMT2-203ENST00000449049 PRMT7Q9NVM4 692 aaPredicted RBP15.43■□□□□ 0.06
SHMT2-203ENST00000449049 INO80B-WBP1J3KQ70 363 aa15.42■□□□□ 0.06
SHMT2-203ENST00000449049 CHRNA1P02708 482 aa15.42■□□□□ 0.06
SHMT2-203ENST00000449049 IQCF3P0C7M6 154 aa15.42■□□□□ 0.06
SHMT2-203ENST00000449049 EIF4BP23588 611 aaKnown RBP15.42■□□□□ 0.06
SHMT2-203ENST00000449049 SNRPFP62306 86 aaKnown RBP15.42■□□□□ 0.06
SHMT2-203ENST00000449049 NCAPHQ15003 741 aa15.42■□□□□ 0.06
SHMT2-203ENST00000449049 NFIL3Q16649 462 aa15.42■□□□□ 0.06
SHMT2-203ENST00000449049 EDRF1Q3B7T1 1238 aa15.42■□□□□ 0.06
SHMT2-203ENST00000449049 TRIM60Q495X7 471 aa15.42■□□□□ 0.06
SHMT2-203ENST00000449049 SYCP3Q8IZU3 236 aa15.42■□□□□ 0.06
SHMT2-203ENST00000449049 PRIMPOLQ96LW4 560 aa15.42■□□□□ 0.06
SHMT2-203ENST00000449049 TSG101Q99816 390 aa15.42■□□□□ 0.06
SHMT2-203ENST00000449049 DUSP9Q99956 384 aaKnown RBP15.42■□□□□ 0.06
SHMT2-203ENST00000449049 INO80BQ9C086 356 aaPredicted RBP15.42■□□□□ 0.06
SHMT2-203ENST00000449049 RBSNQ9H1K0 784 aa15.42■□□□□ 0.06
SHMT2-203ENST00000449049 IKZF4Q9H2S9 585 aa15.42■□□□□ 0.06
SHMT2-203ENST00000449049 CGNQ9P2M7 1197 aaKnown RBP15.42■□□□□ 0.06
SHMT2-203ENST00000449049 ACKR2O00590 384 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 CALUO43852 315 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-203ENST00000449049 PQBP1O60828 265 aaKnown RBP15.41■□□□□ 0.06
SHMT2-203ENST00000449049 EN2P19622 333 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-203ENST00000449049 PCBP1Q15365 356 aaKnown RBP eCLIP15.41■□□□□ 0.06
SHMT2-203ENST00000449049 AMHR2Q16671 573 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 SPATA1Q5VX52 437 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 LUZP1Q86V48 1076 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 GOLGA5Q8TBA6 731 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 CAGE1Q8TC20 777 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 TMEM174Q8WUU8 243 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 TMEM40Q8WWA1 233 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 GINS2Q9Y248 185 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 SMTNL1A8MU46 457 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 CTSHP09668 335 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 CKBP12277 381 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 SLC39A4Q6P5W5 647 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 TRAF7Q6Q0C0 670 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 ZPBP2Q6X784 338 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 HS2ST1Q7LGA3 356 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 ZC3H3Q8IXZ2 948 aaKnown RBP15.41■□□□□ 0.06
SHMT2-203ENST00000449049 CCDC155Q8N6L0 562 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 MRPL4Q9BYD3 311 aaKnown RBP15.41■□□□□ 0.06
SHMT2-203ENST00000449049 AGPAT3Q9NRZ7 376 aa15.41■□□□□ 0.06
SHMT2-203ENST00000449049 CNTNAP2Q9UHC6 1331 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 DCDC2CA8MYV0 355 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 HNRNPDLO14979 420 aaKnown RBP15.4■□□□□ 0.06
SHMT2-203ENST00000449049 CSDE1O75534 798 aaKnown RBP15.4■□□□□ 0.06
SHMT2-203ENST00000449049 TLE2Q04725 743 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 FAAP100Q0VG06 881 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 LRRC26Q2I0M4 334 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 ZNF618Q5T7W0 954 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 C12orf56Q8IXR9 622 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 RNF214Q8ND24 703 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 NFE2L3Q9Y4A8 694 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 TTLL13PA6NNM8 815 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 BECN2A8MW95 431 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 ANKRD63C9JTQ0 380 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 LIG4P49917 911 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 BFSP2Q13515 415 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 PRPF4BQ13523 1007 aaKnown RBP15.4■□□□□ 0.06
SHMT2-203ENST00000449049 COL13A1Q5TAT6 717 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-203ENST00000449049 LRRC55Q6ZSA7 311 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 BICD1Q96G01 975 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 ACO2Q99798 780 aaKnown RBP15.4■□□□□ 0.06
SHMT2-203ENST00000449049 TARS2Q9BW92 718 aaKnown RBP15.4■□□□□ 0.06
SHMT2-203ENST00000449049 STYXL1Q9Y6J8 313 aa15.4■□□□□ 0.06
SHMT2-203ENST00000449049 TISP43B9A030 160 aa15.39■□□□□ 0.05
SHMT2-203ENST00000449049 PITPNM1O00562 1244 aa15.39■□□□□ 0.05
SHMT2-203ENST00000449049 B4GALT5O43286 388 aa15.39■□□□□ 0.05
SHMT2-203ENST00000449049 TSPAN1O60635 241 aa15.39■□□□□ 0.05
SHMT2-203ENST00000449049 NR3C1P04150 777 aa15.39■□□□□ 0.05
SHMT2-203ENST00000449049 SFPQP23246 707 aaKnown RBP eCLIP15.39■□□□□ 0.05
SHMT2-203ENST00000449049 FKBP3Q00688 224 aaKnown RBP15.39■□□□□ 0.05
SHMT2-203ENST00000449049 MYBPC2Q14324 1141 aa15.39■□□□□ 0.05
SHMT2-203ENST00000449049 TSHZ1Q6ZSZ6 1077 aa15.39■□□□□ 0.05
SHMT2-203ENST00000449049 SLC9A9Q8IVB4 645 aa15.39■□□□□ 0.05
SHMT2-203ENST00000449049 CSGALNACT2Q8N6G5 542 aa15.39■□□□□ 0.05
SHMT2-203ENST00000449049 HSD3B7Q9H2F3 369 aa15.39■□□□□ 0.05
SHMT2-203ENST00000449049 USP20Q9Y2K6 914 aa15.39■□□□□ 0.05
SHMT2-203ENST00000449049 SQORQ9Y6N5 450 aa15.39■□□□□ 0.05
SHMT2-203ENST00000449049 TANC1Q9C0D5 1861 aa15.39■□□□□ 0.05
SHMT2-203ENST00000449049 ERLIN2O94905 339 aa15.38■□□□□ 0.05
SHMT2-203ENST00000449049 PROZP22891 400 aa15.38■□□□□ 0.05
SHMT2-203ENST00000449049 ADSSP30520 456 aa15.38■□□□□ 0.05
SHMT2-203ENST00000449049 FBXO47Q5MNV8 452 aa15.38■□□□□ 0.05
SHMT2-203ENST00000449049 NOC3LQ8WTT2 800 aaKnown RBP15.38■□□□□ 0.05
SHMT2-203ENST00000449049 PTPRHQ9HD43 1115 aa15.38■□□□□ 0.05
SHMT2-203ENST00000449049 DMAC2Q9NW81 257 aa15.38■□□□□ 0.05
SHMT2-203ENST00000449049 ATP11BQ9Y2G3 1177 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms