RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 ERLIN2O94905 339 aa14.85□□□□□ -0.03
HMGB3-204ENST00000448905 SLC11A1P49279 550 aa14.85□□□□□ -0.03
HMGB3-204ENST00000448905 VCPP55072 806 aaKnown RBP14.85□□□□□ -0.03
HMGB3-204ENST00000448905 NPEPPSP55786 919 aa14.85□□□□□ -0.03
HMGB3-204ENST00000448905 LAMTOR4Q0VGL1 99 aa14.85□□□□□ -0.03
HMGB3-204ENST00000448905 MXD4Q14582 209 aaPredicted RBP14.85□□□□□ -0.03
HMGB3-204ENST00000448905 PLA2G4FQ68DD2 849 aa14.85□□□□□ -0.03
HMGB3-204ENST00000448905 C4orf19Q8IY42 314 aa14.85□□□□□ -0.03
HMGB3-204ENST00000448905 SLFN12Q8IYM2 578 aa14.85□□□□□ -0.03
HMGB3-204ENST00000448905 WASF1Q92558 559 aa14.85□□□□□ -0.03
HMGB3-204ENST00000448905 TMEM143Q96AN5 459 aa14.85□□□□□ -0.03
HMGB3-204ENST00000448905 ZSWIM4Q9H7M6 989 aa14.85□□□□□ -0.03
HMGB3-204ENST00000448905 SFXN1Q9H9B4 322 aa14.85□□□□□ -0.03
HMGB3-204ENST00000448905 RSAD1Q9HA92 442 aa14.85□□□□□ -0.03
HMGB3-204ENST00000448905 ZNF318Q5VUA4 2279 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 EML1O00423 815 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 BRD1O95696 1058 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 WEE2P0C1S8 567 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 ITGA4P13612 1032 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 EPCAMP16422 314 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 AXLP30530 894 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 YWHABP31946 246 aaKnown RBP14.84□□□□□ -0.03
HMGB3-204ENST00000448905 TFDP1Q14186 410 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 TMC5Q6UXY8 1006 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 GPR149Q86SP6 731 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 ZNF280BQ86YH2 543 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 HACE1Q8IYU2 909 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 KLHL5Q96PQ7 755 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 LARP6Q9BRS8 491 aaKnown RBP14.84□□□□□ -0.03
HMGB3-204ENST00000448905 PHF20Q9BVI0 1012 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 DHX33Q9H6R0 707 aaKnown RBP14.84□□□□□ -0.03
HMGB3-204ENST00000448905 KCNMB3Q9NPA1 279 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 DNAJB4Q9UDY4 337 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 KCNJ14Q9UNX9 436 aa14.84□□□□□ -0.03
HMGB3-204ENST00000448905 FNDC1Q4ZHG4 1894 aaPredicted RBP14.84□□□□□ -0.03
HMGB3-204ENST00000448905 EVPLQ92817 2033 aa14.83□□□□□ -0.03
HMGB3-204ENST00000448905 H0Y858 1186 aa14.83□□□□□ -0.04
HMGB3-204ENST00000448905 NRP1O14786 923 aa14.83□□□□□ -0.04
HMGB3-204ENST00000448905 GALR2O43603 387 aaPredicted RBP14.83□□□□□ -0.04
HMGB3-204ENST00000448905 SLC37A4O43826 429 aa14.83□□□□□ -0.04
HMGB3-204ENST00000448905 GFRA3O60609 400 aa14.83□□□□□ -0.04
HMGB3-204ENST00000448905 CLCN5P51795 746 aa14.83□□□□□ -0.04
HMGB3-204ENST00000448905 PTPN14Q15678 1187 aa14.83□□□□□ -0.04
HMGB3-204ENST00000448905 XKR9Q5GH70 373 aa14.83□□□□□ -0.04
HMGB3-204ENST00000448905 ASTLQ6HA08 431 aaPredicted RBP14.83□□□□□ -0.04
HMGB3-204ENST00000448905 CYP26C1Q6V0L0 522 aa14.83□□□□□ -0.04
HMGB3-204ENST00000448905 AGMOQ6ZNB7 445 aa14.83□□□□□ -0.04
HMGB3-204ENST00000448905 C15orf39Q6ZRI6 1047 aa14.83□□□□□ -0.04
HMGB3-204ENST00000448905 CCDC149Q6ZUS6 474 aa14.83□□□□□ -0.04
HMGB3-204ENST00000448905 TMEM173Q86WV6 379 aaPredicted RBP14.83□□□□□ -0.04
HMGB3-204ENST00000448905 RNF149Q8NC42 400 aa14.83□□□□□ -0.04
HMGB3-204ENST00000448905 BRMS1Q9HCU9 246 aa14.83□□□□□ -0.04
HMGB3-204ENST00000448905 MEIS3P2A8K0S8 358 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 DDHD2O94830 711 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 POMCP01189 267 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 SSBP05455 408 aaKnown RBP eCLIP14.82□□□□□ -0.04
HMGB3-204ENST00000448905 URODP06132 367 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 CNPP09543 421 aaKnown RBP14.82□□□□□ -0.04
HMGB3-204ENST00000448905 NCLP19338 710 aaKnown RBP14.82□□□□□ -0.04
HMGB3-204ENST00000448905 HOXA11P31270 313 aaPredicted RBP14.82□□□□□ -0.04
HMGB3-204ENST00000448905 CLCN4P51793 760 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 AK2P54819 239 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 POU5F1BQ06416 359 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 TDGQ13569 410 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 ANKRD1Q15327 319 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 NPY5RQ15761 445 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 NCAPH2Q6IBW4 605 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 KANK3Q6NY19 840 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 NOTUMQ6P988 496 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 PIK3AP1Q6ZUJ8 805 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 TPH2Q8IWU9 490 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 ZNF579Q8NAF0 562 aaKnown RBP14.82□□□□□ -0.04
HMGB3-204ENST00000448905 CCDC51Q96ER9 411 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 AIFM3Q96NN9 605 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 MTRQ99707 1265 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 LXNQ9BS40 222 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 COLEC11Q9BWP8 271 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 TRIM6Q9C030 488 aaPredicted RBP14.82□□□□□ -0.04
HMGB3-204ENST00000448905 FAM86C1Q9NVL1 165 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 CDH22Q9UJ99 828 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 VAV3Q9UKW4 847 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 PCDHA12Q9UN75 941 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 PIEZO1Q92508 2521 aa14.82□□□□□ -0.04
HMGB3-204ENST00000448905 PDGFBP01127 241 aaPredicted RBP14.81□□□□□ -0.04
HMGB3-204ENST00000448905 SOD2P04179 222 aa14.81□□□□□ -0.04
HMGB3-204ENST00000448905 ASGR2P07307 311 aa14.81□□□□□ -0.04
HMGB3-204ENST00000448905 ADH1AP07327 375 aa14.81□□□□□ -0.04
HMGB3-204ENST00000448905 OR1G1P47890 313 aa14.81□□□□□ -0.04
HMGB3-204ENST00000448905 EMC2Q15006 297 aa14.81□□□□□ -0.04
HMGB3-204ENST00000448905 FERMT3Q86UX7 667 aa14.81□□□□□ -0.04
HMGB3-204ENST00000448905 BCL7CQ8WUZ0 217 aaPredicted RBP14.81□□□□□ -0.04
HMGB3-204ENST00000448905 STAMQ92783 540 aa14.81□□□□□ -0.04
HMGB3-204ENST00000448905 CCDC43Q96MW1 224 aaKnown RBP14.81□□□□□ -0.04
HMGB3-204ENST00000448905 RGL1Q9NZL6 768 aa14.81□□□□□ -0.04
HMGB3-204ENST00000448905 IGSF9Q9P2J2 1179 aa14.81□□□□□ -0.04
HMGB3-204ENST00000448905 CCDC195A0A1B0GUA6 201 aa14.8□□□□□ -0.04
HMGB3-204ENST00000448905 INO80B-WBP1J3KQ70 363 aa14.8□□□□□ -0.04
HMGB3-204ENST00000448905 C2CD2LO14523 706 aa14.8□□□□□ -0.04
HMGB3-204ENST00000448905 LILRB3O75022 631 aa14.8□□□□□ -0.04
HMGB3-204ENST00000448905 SLITRK3O94933 977 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms