RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 SLAIN1Q8ND83 568 aa27.21■■□□□ 1.95
RFFL-206ENST00000447669 KLHDC9Q8NEP7 349 aa27.21■■□□□ 1.95
RFFL-206ENST00000447669 BORCS6Q96GS4 357 aa27.21■■□□□ 1.95
RFFL-206ENST00000447669 MTG1Q9BT17 334 aaPredicted RBP27.21■■□□□ 1.95
RFFL-206ENST00000447669 CCDC113Q9H0I3 377 aa27.21■■□□□ 1.95
RFFL-206ENST00000447669 ARMCX3Q9UH62 379 aaPredicted RBP27.21■■□□□ 1.95
RFFL-206ENST00000447669 RRN3P2A6NIE6 340 aa27.21■■□□□ 1.95
RFFL-206ENST00000447669 GNA14O95837 355 aa27.21■■□□□ 1.95
RFFL-206ENST00000447669 EPB41P11171 864 aaKnown RBP27.21■■□□□ 1.95
RFFL-206ENST00000447669 TMOD1P28289 359 aa27.21■■□□□ 1.95
RFFL-206ENST00000447669 LIG4P49917 911 aa27.21■■□□□ 1.95
RFFL-206ENST00000447669 MARSP56192 900 aaKnown RBP27.21■■□□□ 1.95
RFFL-206ENST00000447669 LRMPQ12912 555 aa27.21■■□□□ 1.95
RFFL-206ENST00000447669 DCAF17Q5H9S7 520 aaPredicted RBP27.21■■□□□ 1.95
RFFL-206ENST00000447669 CCSAPQ6IQ19 270 aaPredicted RBP27.21■■□□□ 1.95
RFFL-206ENST00000447669 C7orf31Q8N865 590 aa27.21■■□□□ 1.95
RFFL-206ENST00000447669 GOLGA5Q8TBA6 731 aa27.21■■□□□ 1.95
RFFL-206ENST00000447669 POMGNT1Q8WZA1 660 aa27.21■■□□□ 1.95
RFFL-206ENST00000447669 GINS2Q9Y248 185 aa27.21■■□□□ 1.95
RFFL-206ENST00000447669 INO80B-WBP1J3KQ70 363 aa27.2■■□□□ 1.94
RFFL-206ENST00000447669 B4GALT5O43286 388 aa27.2■■□□□ 1.94
RFFL-206ENST00000447669 MSCO60682 206 aa27.2■■□□□ 1.94
RFFL-206ENST00000447669 CYP2C9P11712 490 aa27.2■■□□□ 1.94
RFFL-206ENST00000447669 PSMC2P35998 433 aaKnown RBP27.2■■□□□ 1.94
RFFL-206ENST00000447669 NLRP11P59045 1033 aaKnown RBP27.2■■□□□ 1.94
RFFL-206ENST00000447669 CDR2LQ86X02 465 aaPredicted RBP27.2■■□□□ 1.94
RFFL-206ENST00000447669 SLC9A9Q8IVB4 645 aa27.2■■□□□ 1.94
RFFL-206ENST00000447669 CPLX3Q8WVH0 158 aa27.2■■□□□ 1.94
RFFL-206ENST00000447669 KATNAL1Q9BW62 490 aa27.2■■□□□ 1.94
RFFL-206ENST00000447669 INO80BQ9C086 356 aaPredicted RBP27.2■■□□□ 1.94
RFFL-206ENST00000447669 KCNF1Q9H3M0 494 aa27.2■■□□□ 1.94
RFFL-206ENST00000447669 TMEM134Q9H6X4 195 aa27.2■■□□□ 1.94
RFFL-206ENST00000447669 FRMD4BQ9Y2L6 1034 aa27.2■■□□□ 1.94
RFFL-206ENST00000447669 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.2■■□□□ 1.94
RFFL-206ENST00000447669 H0YCG3 227 aa27.19■■□□□ 1.94
RFFL-206ENST00000447669 KIZQ2M2Z5 673 aa27.19■■□□□ 1.94
RFFL-206ENST00000447669 TCERG1LQ5VWI1 586 aa27.19■■□□□ 1.94
RFFL-206ENST00000447669 FRMD5Q7Z6J6 570 aa27.19■■□□□ 1.94
RFFL-206ENST00000447669 CDHR5Q9HBB8 845 aa27.19■■□□□ 1.94
RFFL-206ENST00000447669 KCNG1Q9UIX4 513 aa27.19■■□□□ 1.94
RFFL-206ENST00000447669 PHLPP2Q6ZVD8 1323 aa27.19■■□□□ 1.94
RFFL-206ENST00000447669 MBLAC1A4D2B0 266 aaPredicted RBP27.19■■□□□ 1.94
RFFL-206ENST00000447669 PTENP60484 403 aa27.19■■□□□ 1.94
RFFL-206ENST00000447669 LHX8Q68G74 356 aa27.19■■□□□ 1.94
RFFL-206ENST00000447669 CBWD2Q8IUF1 395 aa27.19■■□□□ 1.94
RFFL-206ENST00000447669 XXYLT1Q8NBI6 393 aa27.19■■□□□ 1.94
RFFL-206ENST00000447669 CACTINQ8WUQ7 758 aaKnown RBP27.19■■□□□ 1.94
RFFL-206ENST00000447669 DNAJB3Q8WWF6 145 aa27.19■■□□□ 1.94
RFFL-206ENST00000447669 NLRP7Q8WX94 980 aa27.19■■□□□ 1.94
RFFL-206ENST00000447669 HMX1Q9NP08 348 aaPredicted RBP27.19■■□□□ 1.94
RFFL-206ENST00000447669 ANKFY1Q9P2R3 1169 aa27.19■■□□□ 1.94
RFFL-206ENST00000447669 C17orf102A2RUQ5 167 aa27.18■■□□□ 1.94
RFFL-206ENST00000447669 RNF225M0QZC1 329 aaPredicted RBP27.18■■□□□ 1.94
RFFL-206ENST00000447669 SLC16A3O15427 465 aaKnown RBP27.18■■□□□ 1.94
RFFL-206ENST00000447669 PRKCBP05771 671 aa27.18■■□□□ 1.94
RFFL-206ENST00000447669 TPM2P07951 284 aa27.18■■□□□ 1.94
RFFL-206ENST00000447669 NKX3-2P78367 333 aa27.18■■□□□ 1.94
RFFL-206ENST00000447669 KCNH2Q12809 1159 aa27.18■■□□□ 1.94
RFFL-206ENST00000447669 TFDP1Q14186 410 aa27.18■■□□□ 1.94
RFFL-206ENST00000447669 SYCP1Q15431 976 aa27.18■■□□□ 1.94
RFFL-206ENST00000447669 ZBTB8OSQ8IWT0 167 aa27.18■■□□□ 1.94
RFFL-206ENST00000447669 GOLGA6L6A8MZA4 724 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 ADRB2P07550 413 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 TRIM49P0CI25 452 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 TRIM49CP0CI26 452 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 FGFR4P22455 802 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 DLG4P78352 724 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 MBTD1Q05BQ5 628 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 TBX2Q13207 712 aaPredicted RBP27.17■■□□□ 1.94
RFFL-206ENST00000447669 SEZ6Q53EL9 994 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 FAM47CQ5HY64 1035 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 C12orf56Q8IXR9 622 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 PLEKHO2Q8TD55 490 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 SCLT1Q96NL6 688 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 MAP7D2Q96T17 732 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 CRACR2AQ9BSW2 395 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 MMRN2Q9H8L6 949 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 PTPN22Q9Y2R2 807 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 ASAP2O43150 1006 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 HARSP12081 509 aaKnown RBP27.17■■□□□ 1.94
RFFL-206ENST00000447669 GPC3P51654 580 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 ADKP55263 362 aaKnown RBP27.17■■□□□ 1.94
RFFL-206ENST00000447669 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.17■■□□□ 1.942e-8■■■■■ 28.1
RFFL-206ENST00000447669 GRIN2DO15399 1336 aa27.17■■□□□ 1.94
RFFL-206ENST00000447669 ZEB2O60315 1214 aa27.16■■□□□ 1.94
RFFL-206ENST00000447669 KPNA6O60684 536 aa27.16■■□□□ 1.94
RFFL-206ENST00000447669 EFNA5P52803 228 aa27.16■■□□□ 1.94
RFFL-206ENST00000447669 PRMT2P55345 433 aa27.16■■□□□ 1.94
RFFL-206ENST00000447669 APBA1Q02410 837 aa27.16■■□□□ 1.94
RFFL-206ENST00000447669 RBL2Q08999 1139 aa27.16■■□□□ 1.94
RFFL-206ENST00000447669 MAPK6Q16659 721 aa27.16■■□□□ 1.94
RFFL-206ENST00000447669 ZBTB41Q5SVQ8 909 aa27.16■■□□□ 1.94
RFFL-206ENST00000447669 GDF6Q6KF10 455 aaPredicted RBP27.16■■□□□ 1.94
RFFL-206ENST00000447669 ZBTB33Q86T24 672 aa27.16■■□□□ 1.94
RFFL-206ENST00000447669 SLC35C1Q96A29 364 aa27.16■■□□□ 1.94
RFFL-206ENST00000447669 MATR3P43243 847 aaKnown RBP eCLIP27.16■■□□□ 1.943e-6■■■□□ 15.2
RFFL-206ENST00000447669 MTFR1Q15390 333 aa27.16■■□□□ 1.94
RFFL-206ENST00000447669 FAM213AQ9BRX8 229 aa27.16■■□□□ 1.94
RFFL-206ENST00000447669 UNC93B1Q9H1C4 597 aa27.16■■□□□ 1.94
RFFL-206ENST00000447669 CGNQ9P2M7 1197 aaKnown RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms