RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 CCDC70Q6NSX1 233 aa7.7□□□□□ -1.18
COL11A1-205ENST00000447608 PAQR3Q6TCH7 311 aa7.7□□□□□ -1.18
COL11A1-205ENST00000447608 SPRED2Q7Z698 418 aa7.7□□□□□ -1.18
COL11A1-205ENST00000447608 TTC7BQ86TV6 843 aa7.7□□□□□ -1.18
COL11A1-205ENST00000447608 DRC7Q8IY82 874 aa7.7□□□□□ -1.18
COL11A1-205ENST00000447608 CCT6BQ92526 530 aa7.7□□□□□ -1.18
COL11A1-205ENST00000447608 TOE1Q96GM8 510 aaKnown RBP7.7□□□□□ -1.18
COL11A1-205ENST00000447608 LRRC27Q9C0I9 530 aa7.7□□□□□ -1.18
COL11A1-205ENST00000447608 BTBD1Q9H0C5 482 aa7.7□□□□□ -1.18
COL11A1-205ENST00000447608 TNFRSF12AQ9NP84 129 aa7.7□□□□□ -1.18
COL11A1-205ENST00000447608 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.7□□□□□ -1.18
COL11A1-205ENST00000447608 GALNT8Q9NY28 637 aa7.7□□□□□ -1.18
COL11A1-205ENST00000447608 C9orf78Q9NZ63 289 aaPredicted RBP7.7□□□□□ -1.18
COL11A1-205ENST00000447608 GPR160Q9UJ42 338 aa7.7□□□□□ -1.18
COL11A1-205ENST00000447608 ZBTB7AO95365 584 aa7.69□□□□□ -1.18
COL11A1-205ENST00000447608 PNLIPP16233 465 aa7.69□□□□□ -1.18
COL11A1-205ENST00000447608 PFKPQ01813 784 aa7.69□□□□□ -1.18
COL11A1-205ENST00000447608 PDCD2Q16342 344 aaPredicted RBP7.69□□□□□ -1.18
COL11A1-205ENST00000447608 MSMPQ1L6U9 139 aa7.69□□□□□ -1.18
COL11A1-205ENST00000447608 IZUMO3Q5VZ72 239 aa7.69□□□□□ -1.18
COL11A1-205ENST00000447608 PPP4R3AQ6IN85 833 aa7.69□□□□□ -1.18
COL11A1-205ENST00000447608 TEPPQ6URK8 271 aa7.69□□□□□ -1.18
COL11A1-205ENST00000447608 LDHAL6AQ6ZMR3 332 aa7.69□□□□□ -1.18
COL11A1-205ENST00000447608 ZNF574Q6ZN55 896 aaPredicted RBP7.69□□□□□ -1.18
COL11A1-205ENST00000447608 NSUN6Q8TEA1 469 aaKnown RBP7.69□□□□□ -1.18
COL11A1-205ENST00000447608 C7orf25Q9BPX7 421 aa7.69□□□□□ -1.18
COL11A1-205ENST00000447608 FDXACB1Q9BRP7 624 aaPredicted RBP7.69□□□□□ -1.18
COL11A1-205ENST00000447608 BCAS3Q9H6U6 928 aa7.69□□□□□ -1.18
COL11A1-205ENST00000447608 C14orf93Q9H972 538 aaKnown RBP7.69□□□□□ -1.18
COL11A1-205ENST00000447608 RBM12Q9NTZ6 932 aaKnown RBP7.69□□□□□ -1.18
COL11A1-205ENST00000447608 hCG_1642624A0A1W2PR95 340 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 ZNF839A8K0R7 811 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 SLC16A6O15403 523 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 MAFGO15525 162 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 ENO2P09104 434 aaPredicted RBP7.68□□□□□ -1.18
COL11A1-205ENST00000447608 H2AFB1P0C5Y9 115 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 H2AFB2P0C5Z0 115 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 XPAP23025 273 aaPredicted RBP7.68□□□□□ -1.18
COL11A1-205ENST00000447608 APEX1P27695 318 aaKnown RBP7.68□□□□□ -1.18
COL11A1-205ENST00000447608 STT3AP46977 705 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 HK3P52790 923 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 ZNF543Q08ER8 600 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 MGAT2Q10469 447 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 NOGQ13253 232 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 FGL2Q14314 439 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 SEPT2Q15019 361 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 ELF2Q15723 593 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 CCDC178Q5BJE1 867 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 GPR155Q7Z3F1 870 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 SAPCD2Q86UD0 394 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 PROSER1Q86XN7 944 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 RHOT1Q8IXI2 618 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 FAM126BQ8IXS8 530 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 STK11IPQ8N1F8 1099 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 RAB24Q969Q5 203 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 SHISA4Q96DD7 197 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 HIST1H2AHQ96KK5 128 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 HIST1H2AJQ99878 128 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 PTPN18Q99952 460 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 KIAA1586Q9HCI6 787 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 STARD7Q9NQZ5 370 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 WASF3Q9UPY6 502 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 SLC5A6Q9Y289 635 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 HCFC2Q9Y5Z7 792 aa7.68□□□□□ -1.18
COL11A1-205ENST00000447608 H3BUI4 141 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 SLC26A4O43511 780 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 FRS3O43559 492 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 TGFB1P01137 390 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 RPLP2P05387 115 aaKnown RBP7.67□□□□□ -1.18
COL11A1-205ENST00000447608 SDHBP21912 280 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 STAT5AP42229 794 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 NKX6-1P78426 367 aaPredicted RBP7.67□□□□□ -1.18
COL11A1-205ENST00000447608 PRR5P85299 388 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 MGAT5Q09328 741 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 WDR78Q5VTH9 848 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 WFDC3Q8IUB2 231 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 LIX1LQ8IVB5 337 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 MYCT1Q8N699 235 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 SPATA5Q8NB90 893 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 IL31RAQ8NI17 732 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 DMRTA2Q96SC8 542 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 SENP7Q9BQF6 1050 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 SAGE1Q9NXZ1 904 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 HSPBP1Q9NZL4 362 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 KCMF1Q9P0J7 381 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.67□□□□□ -1.18
COL11A1-205ENST00000447608 PCDHGB2Q9Y5G2 931 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 PCDHA3Q9Y5H8 950 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 USP19O94966 1318 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 MROH2BQ7Z745 1585 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 NESP48681 1621 aa7.67□□□□□ -1.18
COL11A1-205ENST00000447608 A0A087WV62 115 aa7.66□□□□□ -1.18
COL11A1-205ENST00000447608 A0A0A6YYK5 440 aaPredicted RBP7.66□□□□□ -1.18
COL11A1-205ENST00000447608 POM121BA6NF01 834 aa7.66□□□□□ -1.18
COL11A1-205ENST00000447608 PHGDHO43175 533 aaKnown RBP7.66□□□□□ -1.18
COL11A1-205ENST00000447608 NRP2O60462 931 aa7.66□□□□□ -1.18
COL11A1-205ENST00000447608 HPXP02790 462 aa7.66□□□□□ -1.18
COL11A1-205ENST00000447608 GRK6P43250 576 aa7.66□□□□□ -1.18
COL11A1-205ENST00000447608 NRG3P56975 720 aa7.66□□□□□ -1.18
COL11A1-205ENST00000447608 FOXD4Q12950 439 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms