RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 IFI16Q16666 785 aaKnown RBP6.17□□□□□ -1.42
SDCBP-205ENST00000447267 NKPD1Q17RQ9 610 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 FAM47CQ5HY64 1035 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 TMEM63BQ5T3F8 832 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 PCNX4Q63HM2 1172 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 SPACA3Q8IXA5 215 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 STK11IPQ8N1F8 1099 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 ACER1Q8TDN7 264 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 MISP3Q96FF7 219 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 YME1L1Q96TA2 773 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 PLA2G12BQ9BX93 195 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 CLMPQ9H6B4 373 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 C12orf49Q9H741 205 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 FBRSQ9HAH7 460 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 VAV3Q9UKW4 847 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 TENM4Q6N022 2769 aa6.17□□□□□ -1.42
SDCBP-205ENST00000447267 IGSF10Q6WRI0 2623 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 WDR46O15213 610 aaKnown RBP6.16□□□□□ -1.42
SDCBP-205ENST00000447267 EOMESO95936 686 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 GLULP15104 373 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 JUNBP17275 347 aaPredicted RBP6.16□□□□□ -1.42
SDCBP-205ENST00000447267 BMPR1AP36894 532 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 CCR10P46092 362 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 CASP7P55210 303 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 CAVIN4Q5BKX8 364 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 TAF7LQ5H9L4 462 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 ALG1LQ6GMV1 187 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 LRRN4CLQ8ND94 238 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 C12orf42Q96LP6 360 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 FEZ1Q99689 392 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 CEP44Q9C0F1 390 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 SRCIN1Q9C0H9 1055 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 LMAN2LQ9H0V9 348 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 EPC1Q9H2F5 836 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 MKNK2Q9HBH9 465 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 PRDM7Q9NQW5 492 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 RXFP3Q9NSD7 469 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 SEMA4GQ9NTN9 838 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 DLGAP2Q9P1A6 1054 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 ZBTB21Q9ULJ3 1066 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 PCDHA4Q9UN74 947 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 NUDCQ9Y266 331 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 DIS3Q9Y2L1 958 aaKnown RBP6.16□□□□□ -1.42
SDCBP-205ENST00000447267 NR2E1Q9Y466 385 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 LAS1LQ9Y4W2 734 aaKnown RBP6.16□□□□□ -1.42
SDCBP-205ENST00000447267 MROH5Q6ZUA9 1318 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 TET1Q8NFU7 2136 aa6.16□□□□□ -1.42
SDCBP-205ENST00000447267 ADAMTS20P59510 1910 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 NTRK1P04629 796 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 LDHBP07195 334 aaKnown RBP6.15□□□□□ -1.42
SDCBP-205ENST00000447267 WEE2P0C1S8 567 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 BTDP43251 543 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 NKX3-2P78367 333 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 FOXO4P98177 505 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 TNFAIP2Q03169 654 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 KCNA1Q09470 495 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 BFSP2Q13515 415 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 COG2Q14746 738 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 ARMCX6Q7L4S7 300 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 CYFIP1Q7L576 1253 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 POU5F2Q8N7G0 328 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 POMKQ9H5K3 350 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 DNAJC18Q9H819 358 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 SSU72Q9NP77 194 aaKnown RBP6.15□□□□□ -1.42
SDCBP-205ENST00000447267 HOXC10Q9NYD6 342 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 CA14Q9ULX7 337 aa6.15□□□□□ -1.42
SDCBP-205ENST00000447267 CLSPNQ9HAW4 1339 aa6.15□□□□□ -1.43
SDCBP-205ENST00000447267 ASXL3Q9C0F0 2248 aa6.15□□□□□ -1.43
SDCBP-205ENST00000447267 SIP14410 1827 aa6.15□□□□□ -1.43
SDCBP-205ENST00000447267 DOCK2Q92608 1830 aa6.15□□□□□ -1.43
SDCBP-205ENST00000447267 PIEZO2Q9H5I5 2752 aa6.15□□□□□ -1.43
SDCBP-205ENST00000447267 CDK5RAP2Q96SN8 1893 aa6.15□□□□□ -1.43
SDCBP-205ENST00000447267 PTPRSQ13332 1948 aa6.15□□□□□ -1.43
SDCBP-205ENST00000447267 PI4KAP2A4QPH2 592 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 FANCGO15287 622 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 NARSO43776 548 aaKnown RBP6.14□□□□□ -1.43
SDCBP-205ENST00000447267 TBC1D4O60343 1298 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 SLITRK5O94991 958 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 GH2P01242 217 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 AMHP03971 560 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 C8AP07357 584 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 LINC00271P0C7V0 271 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 RHBDL3P58872 404 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 CHMP4BP1P59074 171 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 TROAPQ12815 778 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 SLBPQ14493 270 aaKnown RBP eCLIP6.14□□□□□ -1.43
SDCBP-205ENST00000447267 NKG7Q16617 165 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 KIAA1211LQ6NV74 962 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 SYCE2Q6PIF2 218 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 TSSK4Q6SA08 328 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 ZNF843Q8N446 348 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 PI4KAP1Q8N8J0 262 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 WDR66Q8TBY9 1149 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 ATG4CQ96DT6 458 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 PLPPR2Q96GM1 343 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 CRELD1Q96HD1 420 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 HRASLS5Q96KN8 279 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 C11orf84Q9BUA3 381 aaPredicted RBP6.14□□□□□ -1.43
SDCBP-205ENST00000447267 SEZ6LQ9BYH1 1024 aa6.14□□□□□ -1.43
SDCBP-205ENST00000447267 AP5M1Q9H0R1 490 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms