RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 PRKCEQ02156 737 aa19.03■□□□□ 0.64
ATG9A-215ENST00000446716 TMED2Q15363 201 aa19.03■□□□□ 0.64
ATG9A-215ENST00000446716 DGKDQ16760 1214 aa19.03■□□□□ 0.64
ATG9A-215ENST00000446716 DHX38Q92620 1227 aaKnown RBP19.03■□□□□ 0.64
ATG9A-215ENST00000446716 FAF2Q96CS3 445 aa19.03■□□□□ 0.64
ATG9A-215ENST00000446716 RALAP11233 206 aa19.03■□□□□ 0.64
ATG9A-215ENST00000446716 MXRA8Q9BRK3 442 aa19.03■□□□□ 0.64
ATG9A-215ENST00000446716 FSD1LQ9BXM9 530 aa19.03■□□□□ 0.64
ATG9A-215ENST00000446716 CCSER1Q9C0I3 900 aa19.03■□□□□ 0.64
ATG9A-215ENST00000446716 BCORL1Q5H9F3 1711 aa19.03■□□□□ 0.64
ATG9A-215ENST00000446716 STX1BP61266 288 aa19.03■□□□□ 0.64
ATG9A-215ENST00000446716 SEMA3FQ13275 785 aa19.03■□□□□ 0.64
ATG9A-215ENST00000446716 EMC2Q15006 297 aa19.03■□□□□ 0.64
ATG9A-215ENST00000446716 XRRA1Q6P2D8 792 aa19.03■□□□□ 0.64
ATG9A-215ENST00000446716 PDXKO00764 312 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 SLMAPQ14BN4 828 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 EFHC2Q5JST6 749 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 FAM102AQ5T9C2 384 aaPredicted RBP19.02■□□□□ 0.64
ATG9A-215ENST00000446716 ZNF746Q6NUN9 644 aaPredicted RBP19.02■□□□□ 0.64
ATG9A-215ENST00000446716 SHC4Q6S5L8 630 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 YAF2Q8IY57 180 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 ZNF500O60304 480 aaPredicted RBP19.02■□□□□ 0.64
ATG9A-215ENST00000446716 PCK1P35558 622 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 RFC5P40937 340 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 CXCL9Q07325 125 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 NME3Q13232 169 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 CENPUQ71F23 418 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 TRIM42Q8IWZ5 723 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 PYROXD1Q8WU10 500 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 TRIM62Q9BVG3 475 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 HEMGNQ9BXL5 484 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 SIK2Q9H0K1 926 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 PXDNLA1KZ92 1463 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 ASAP2O43150 1006 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 RGS2P41220 211 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 IFNAR2P48551 515 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 RPS6P62753 249 aaKnown RBP19.02■□□□□ 0.64
ATG9A-215ENST00000446716 TTC31Q49AM3 519 aaPredicted RBP19.02■□□□□ 0.64
ATG9A-215ENST00000446716 MAP3K21Q5TCX8 1036 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 GLB1LQ6UWU2 654 aa19.02■□□□□ 0.64
ATG9A-215ENST00000446716 INTS9Q9NV88 658 aaKnown RBP19.02■□□□□ 0.64
ATG9A-215ENST00000446716 FAM205CA6NFA0 338 aa19.02■□□□□ 0.63
ATG9A-215ENST00000446716 LAMC2Q13753 1193 aa19.02■□□□□ 0.63
ATG9A-215ENST00000446716 ACCSLQ4AC99 568 aa19.02■□□□□ 0.63
ATG9A-215ENST00000446716 SPATA2LQ8IUW3 424 aaPredicted RBP19.02■□□□□ 0.63
ATG9A-215ENST00000446716 IFT43Q96FT9 208 aa19.02■□□□□ 0.63
ATG9A-215ENST00000446716 FBXO28Q9NVF7 368 aa19.02■□□□□ 0.63
ATG9A-215ENST00000446716 SNX9Q9Y5X1 595 aa19.02■□□□□ 0.63
ATG9A-215ENST00000446716 SART1O43290 800 aaKnown RBP19.01■□□□□ 0.63
ATG9A-215ENST00000446716 CPT1AP50416 773 aa19.01■□□□□ 0.63
ATG9A-215ENST00000446716 RBP5P82980 135 aa19.01■□□□□ 0.63
ATG9A-215ENST00000446716 KCTD16Q68DU8 428 aa19.01■□□□□ 0.63
ATG9A-215ENST00000446716 ZDHHC15Q96MV8 337 aa19.01■□□□□ 0.63
ATG9A-215ENST00000446716 RIT2Q99578 217 aa19.01■□□□□ 0.63
ATG9A-215ENST00000446716 MOV10L1Q9BXT6 1211 aaKnown RBP19.01■□□□□ 0.63
ATG9A-215ENST00000446716 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.01■□□□□ 0.63
ATG9A-215ENST00000446716 NFIAQ12857 509 aa19.01■□□□□ 0.63
ATG9A-215ENST00000446716 NPHP3-ACAD11A0A0J9YXS1 232 aa19.01■□□□□ 0.63
ATG9A-215ENST00000446716 HBP1O60381 514 aa19.01■□□□□ 0.63
ATG9A-215ENST00000446716 PAMP19021 973 aa19.01■□□□□ 0.63
ATG9A-215ENST00000446716 ACOT2P49753 483 aa19.01■□□□□ 0.63
ATG9A-215ENST00000446716 TRIM72Q6ZMU5 477 aa19.01■□□□□ 0.63
ATG9A-215ENST00000446716 DEPDC1BQ8WUY9 529 aa19.01■□□□□ 0.63
ATG9A-215ENST00000446716 TRIM9Q9C026 710 aa19.01■□□□□ 0.63
ATG9A-215ENST00000446716 EXOC1LA0A1B0GW35 172 aa19.01■□□□□ 0.63
ATG9A-215ENST00000446716 TFRCP02786 760 aaKnown RBP19■□□□□ 0.63
ATG9A-215ENST00000446716 DIP2BQ9P265 1576 aa19■□□□□ 0.63
ATG9A-215ENST00000446716 POLRMTO00411 1230 aaKnown RBP19■□□□□ 0.63
ATG9A-215ENST00000446716 GRIK1P39086 918 aa19■□□□□ 0.63
ATG9A-215ENST00000446716 RAD51Q06609 339 aa19■□□□□ 0.63
ATG9A-215ENST00000446716 ZNF564Q8TBZ8 553 aaPredicted RBP19■□□□□ 0.63
ATG9A-215ENST00000446716 MED4Q9NPJ6 270 aa19■□□□□ 0.63
ATG9A-215ENST00000446716 SLC12A1Q13621 1099 aa19■□□□□ 0.63
ATG9A-215ENST00000446716 PLA2G4FQ68DD2 849 aa19■□□□□ 0.63
ATG9A-215ENST00000446716 NUDT18Q6ZVK8 323 aa19■□□□□ 0.63
ATG9A-215ENST00000446716 ABHD10Q9NUJ1 306 aa19■□□□□ 0.63
ATG9A-215ENST00000446716 HSPBP1Q9NZL4 362 aa19■□□□□ 0.63
ATG9A-215ENST00000446716 APPL2Q8NEU8 664 aa19■□□□□ 0.63
ATG9A-215ENST00000446716 ACER1Q8TDN7 264 aa19■□□□□ 0.63
ATG9A-215ENST00000446716 RNF25Q96BH1 459 aaPredicted RBP19■□□□□ 0.63
ATG9A-215ENST00000446716 ALKBH8Q96BT7 664 aaKnown RBP19■□□□□ 0.63
ATG9A-215ENST00000446716 TXNDC9O14530 226 aa18.99■□□□□ 0.63
ATG9A-215ENST00000446716 PALMO75781 387 aa18.99■□□□□ 0.63
ATG9A-215ENST00000446716 ITGA4P13612 1032 aa18.99■□□□□ 0.63
ATG9A-215ENST00000446716 KCNB1Q14721 858 aa18.99■□□□□ 0.63
ATG9A-215ENST00000446716 TMEM132DQ14C87 1099 aa18.99■□□□□ 0.63
ATG9A-215ENST00000446716 FRMD5Q7Z6J6 570 aa18.99■□□□□ 0.63
ATG9A-215ENST00000446716 RSRC1Q96IZ7 334 aaKnown RBP18.99■□□□□ 0.63
ATG9A-215ENST00000446716 NUP85Q9BW27 656 aa18.99■□□□□ 0.63
ATG9A-215ENST00000446716 FBXO2Q9UK22 296 aaPredicted RBP18.99■□□□□ 0.63
ATG9A-215ENST00000446716 SYNGAP1Q96PV0 1343 aa18.99■□□□□ 0.63
ATG9A-215ENST00000446716 GOLGA8QA0A0J9YX86 632 aa18.99■□□□□ 0.63
ATG9A-215ENST00000446716 GOLGA8OA6NCC3 632 aa18.99■□□□□ 0.63
ATG9A-215ENST00000446716 RRN3P2A6NIE6 340 aa18.99■□□□□ 0.63
ATG9A-215ENST00000446716 GOLGA8NF8WBI6 632 aa18.99■□□□□ 0.63
ATG9A-215ENST00000446716 KRT7P08729 469 aa18.99■□□□□ 0.63
ATG9A-215ENST00000446716 MMP14P50281 582 aa18.99■□□□□ 0.63
ATG9A-215ENST00000446716 CACNB2Q08289 660 aaPredicted RBP18.99■□□□□ 0.63
ATG9A-215ENST00000446716 TAAR1Q96RJ0 339 aa18.99■□□□□ 0.63
ATG9A-215ENST00000446716 CAPS2Q9BXY5 557 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms